-
1
-
-
66349088326
-
MicroRNA involvement in the pathogenesis and management of breast cancer
-
2-s2.0-66349088326 10.1136/jcp.2008.060681
-
Khoshnaw S. M., Green A. R., Powe D. G., Ellis I. O., MicroRNA involvement in the pathogenesis and management of breast cancer. Journal of Clinical Pathology 2009 62 5 422 428 2-s2.0-66349088326 10.1136/jcp.2008.060681
-
(2009)
Journal of Clinical Pathology
, vol.62
, Issue.5
, pp. 422-428
-
-
Khoshnaw, S.M.1
Green, A.R.2
Powe, D.G.3
Ellis, I.O.4
-
2
-
-
53549097349
-
MicroRNAs: Key players in the immune system, differentiation, tumorigenesis and cell death
-
2-s2.0-53549097349 10.1038/onc.2008.274
-
Schickel R., Boyerinas B., Park S.-M., Peter M. E., MicroRNAs: key players in the immune system, differentiation, tumorigenesis and cell death. Oncogene 2008 27 45 5959 5974 2-s2.0-53549097349 10.1038/onc.2008.274
-
(2008)
Oncogene
, vol.27
, Issue.45
, pp. 5959-5974
-
-
Schickel, R.1
Boyerinas, B.2
Park, S.-M.3
Peter, M.E.4
-
4
-
-
60849112259
-
Annotation of mammalian primary microRNAs
-
2-s2.0-60849112259 10.1186/1471-2164-9-564
-
Saini H. K., Enright A. J., Griffiths-Jones S., Annotation of mammalian primary microRNAs. BMC Genomics 2008 9, article 564 2-s2.0-60849112259 10.1186/1471-2164-9-564
-
(2008)
BMC Genomics
, vol.9564
-
-
Saini, H.K.1
Enright, A.J.2
Griffiths-Jones, S.3
-
5
-
-
79955524661
-
The full-length transcripts and promoter analysis of intergenic microRNAs in Drosophila melanogaster
-
2-s2.0-79955524661 10.1016/j.ygeno.2011.02.004
-
Qian J., Zhang Z., Liang J., Ge Q., Duan X., Ma F., Li F., The full-length transcripts and promoter analysis of intergenic microRNAs in Drosophila melanogaster. Genomics 2011 97 5 294 303 2-s2.0-79955524661 10.1016/j.ygeno.2011.02.004
-
(2011)
Genomics
, vol.97
, Issue.5
, pp. 294-303
-
-
Qian, J.1
Zhang, Z.2
Liang, J.3
Ge, Q.4
Duan, X.5
Ma, F.6
Li, F.7
-
6
-
-
70349643725
-
Chromatin poises miRNA- and protein-coding genes for expression
-
2-s2.0-70349643725 10.1101/gr.090951.109
-
Barski A., Jothi R., Cuddapah S., Cui K., Roh T.-Y., Schones D. E., Zhao K., Chromatin poises miRNA- and protein-coding genes for expression. Genome Research 2009 19 10 1742 1751 2-s2.0-70349643725 10.1101/gr.090951.109
-
(2009)
Genome Research
, vol.19
, Issue.10
, pp. 1742-1751
-
-
Barski, A.1
Jothi, R.2
Cuddapah, S.3
Cui, K.4
Roh, T.-Y.5
Schones, D.E.6
Zhao, K.7
-
7
-
-
82255185653
-
Identifying transcriptional start sites of human microRNAs based on high-throughput sequencing data
-
2-s2.0-82255185653 10.1093/nar/gkr604
-
Chien C.-H., Sun Y.-M., Chang W.-C., Chiang-Hsieh P.-Y., Lee T.-Y., Tsai W.-C., Horng J.-T., Tsou A.-P., Huang H.-D., Identifying transcriptional start sites of human microRNAs based on high-throughput sequencing data. Nucleic Acids Research 2011 39 21 9345 9356 2-s2.0-82255185653 10.1093/nar/gkr604
-
(2011)
Nucleic Acids Research
, vol.39
, Issue.21
, pp. 9345-9356
-
-
Chien, C.-H.1
Sun, Y.-M.2
Chang, W.-C.3
Chiang-Hsieh, P.-Y.4
Lee, T.-Y.5
Tsai, W.-C.6
Horng, J.-T.7
Tsou, A.-P.8
Huang, H.-D.9
-
8
-
-
84864883239
-
MicroRNA transcription start site prediction with multi-objective feature selection
-
2-s2.0-84864883239, ARTICLE 6
-
Bhattacharyya M., Feuerbach L., Bhadra T., Lengauer T., Bandyopadhyay S., MicroRNA transcription start site prediction with multi-objective feature selection. Statistical Applications in Genetics and Molecular Biology 2012 11 1, article 6 2-s2.0-84864883239
-
(2012)
Statistical Applications in Genetics and Molecular Biology
, vol.11
, Issue.1
-
-
Bhattacharyya, M.1
Feuerbach, L.2
Bhadra, T.3
Lengauer, T.4
Bandyopadhyay, S.5
-
9
-
-
84866320260
-
Development of a novel microRNA promoter microarray for ChIP-on-chip assay to identify epigenetically regulated microRNAs
-
2-s2.0-84866320260 10.1016/j.bbrc.2012.08.012
-
Saito Y., Suzuki H., Taya T., Nishizawa M., Tsugawa H., Matsuzaki J., Hirata K., Saito H., Hibi T., Development of a novel microRNA promoter microarray for ChIP-on-chip assay to identify epigenetically regulated microRNAs. Biochemical and Biophysical Research Communications 2012 426 1 33 37 2-s2.0-84866320260 10.1016/j.bbrc.2012.08.012
-
(2012)
Biochemical and Biophysical Research Communications
, vol.426
, Issue.1
, pp. 33-37
-
-
Saito, Y.1
Suzuki, H.2
Taya, T.3
Nishizawa, M.4
Tsugawa, H.5
Matsuzaki, J.6
Hirata, K.7
Saito, H.8
Hibi, T.9
-
10
-
-
75549092303
-
TransmiR: A transcription factor microRNA regulation database
-
supplement 1 2-s2.0-75549092303 10.1093/nar/gkp803
-
Wang J., Lu M., Qiu C., Cui Q., TransmiR: a transcription factor microRNA regulation database. Nucleic Acids Research 2009 38 supplement 1 D119 D122 2-s2.0-75549092303 10.1093/nar/gkp803
-
(2009)
Nucleic Acids Research
, vol.38
-
-
Wang, J.1
Lu, M.2
Qiu, C.3
Cui, Q.4
-
11
-
-
34547555796
-
Global and local architecture of the mammalian microRNA-transcription factor regulatory network
-
DOI 10.1371/journal.pcbi.0030131
-
Shalgi R., Lieber D., Oren M., Pilpel Y., Global and local architecture of the mammalian microRNA-transcription factor regulatory network. PLoS Computational Biology 2007 3 7, article e131 2-s2.0-48049087948 10.1371/journal.pcbi.0030131 (Pubitemid 47196171)
-
(2007)
PLoS Computational Biology
, vol.3
, Issue.7
, pp. 1291-1304
-
-
Shalgi, R.1
Lieber, D.2
Oren, M.3
Pilpel, Y.4
-
12
-
-
79951521140
-
Coregulation of transcription factors and microRNAs in human transcriptional regulatory network
-
supplement 1, article S41 2-s2.0-79951521140 10.1186/1471-2105-12-S1-S41
-
Chen C.-Y., Chen S.-T., Fuh C.-S., Juan H.-F., Huang H.-C., Coregulation of transcription factors and microRNAs in human transcriptional regulatory network. BMC Bioinformatics 2011 12 supplement 1, article S41 2-s2.0-79951521140 10.1186/1471-2105-12-S1-S41
-
(2011)
BMC Bioinformatics
, vol.12
-
-
Chen, C.-Y.1
Chen, S.-T.2
Fuh, C.-S.3
Juan, H.-F.4
Huang, H.-C.5
-
13
-
-
70349334678
-
Genome-wide survey of microRNA-transcription factor feed-forward regulatory circuits in human
-
2-s2.0-70349334678 10.1039/b900177h
-
Re A., Core D., Taverna D., Caselle M., Genome-wide survey of microRNA-transcription factor feed-forward regulatory circuits in human. Molecular BioSystems 2009 5 8 854 867 2-s2.0-70349334678 10.1039/b900177h
-
(2009)
Molecular BioSystems
, vol.5
, Issue.8
, pp. 854-867
-
-
Re, A.1
Core, D.2
Taverna, D.3
Caselle, M.4
-
14
-
-
77956520986
-
CircuitsDB: A database of mixed microRNA/transcription factor feed-forward regulatory circuits in human and mouse
-
2-s2.0-77956520986 10.1186/1471-2105-11-435
-
Friard O., Re A., Taverna D., de Bortoli M., Corá D., CircuitsDB: a database of mixed microRNA/transcription factor feed-forward regulatory circuits in human and mouse. BMC Bioinformatics 2010 11, article 435 2-s2.0-77956520986 10.1186/1471-2105-11-435
-
(2010)
BMC Bioinformatics
, pp. 11435
-
-
Friard, O.1
Re, A.2
Taverna, D.3
De Bortoli, M.4
Corá, D.5
-
15
-
-
79952198386
-
MIR@NT@N: A framework integrating transcription factors, microRNAs and their targets to identify sub-network motifs in a meta-regulation network model
-
2-s2.0-79952198386 10.1186/1471-2105-12-67
-
le Bechec A., Portales-Casamar E., Vetter G., Moes M., Zindy P.-J., Saumet A., Arenillas D., Theillet C., Wasserman W. W., Lecellier C.-H., Friederich E., MIR@NT@N: a framework integrating transcription factors, microRNAs and their targets to identify sub-network motifs in a meta-regulation network model. BMC Bioinformatics 2011 12, article 67 2-s2.0-79952198386 10.1186/1471-2105-12-67
-
(2011)
BMC Bioinformatics
, vol.1267
-
-
Le Bechec, A.1
Portales-Casamar, E.2
Vetter, G.3
Moes, M.4
Zindy, P.-J.5
Saumet, A.6
Arenillas, D.7
Theillet, C.8
Wasserman, W.W.9
Lecellier, C.-H.10
Friederich, E.11
-
16
-
-
80051755369
-
MIRTFnet: Analysis of miRNA regulated transcription factors
-
2-s2.0-80051755369 10.1371/journal.pone.0022519, ARTICLE E22519
-
Naeem H., Kuffner R., Zimmer R., MIRTFnet: analysis of miRNA regulated transcription factors. PLoS ONE 2011 6 8, article e22519 2-s2.0-80051755369 10.1371/journal.pone.0022519
-
(2011)
PLoS ONE
, vol.6
, Issue.8
-
-
Naeem, H.1
Kuffner, R.2
Zimmer, R.3
-
17
-
-
84863265710
-
Dissection of human miRNA regulatory influence to subpathway
-
2-s2.0-84863265710 10.1093/bib/bbr043
-
Li X., Jiang W., Li W., Lian B., Wang S., Liao M., Chen X., Wang Y., Lv Y., Wang S., Yang L., Dissection of human miRNA regulatory influence to subpathway. Briefings in Bioinformatics 2012 13 2 175 186 2-s2.0-84863265710 10.1093/bib/bbr043
-
(2012)
Briefings in Bioinformatics
, vol.13
, Issue.2
, pp. 175-186
-
-
Li, X.1
Jiang, W.2
Li, W.3
Lian, B.4
Wang, S.5
Liao, M.6
Chen, X.7
Wang, Y.8
Lv, Y.9
Wang, S.10
Yang, L.11
-
18
-
-
33750959240
-
Fast index based algorithms and software for matching position specific scoring matrices
-
DOI 10.1186/1471-2105-7-389
-
Beckstette M., Homann R., Giegerich R., Kurtz S., Fast index based algorithms and software for matching position specific scoring matrices. BMC Bioinformatics 2006 7, article 389 2-s2.0-33750959240 10.1186/1471-2105-7-389 (Pubitemid 44734043)
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 389
-
-
Beckstette, M.1
Homann, R.2
Giegerich, R.3
Kurtz, S.4
-
19
-
-
0037100636
-
Statistical significance of clusters of motifs represented by position specific scoring matrices in nucleotide sequences
-
Frith M. C., Spouge J. L., Hansen U., Weng Z., Statistical significance of clusters of motifs represented by position specific scoring matrices in nucleotide sequences. Nucleic Acids Research 2002 30 14 3214 3224 2-s2.0-0037100636 (Pubitemid 34846185)
-
(2002)
Nucleic Acids Research
, vol.30
, Issue.14
, pp. 3214-3224
-
-
Frith, M.C.1
Spouge, J.L.2
Hansen, U.3
Weng, Z.4
-
21
-
-
84863378672
-
Identification of co-occurring transcription factor binding sites from DNA sequence using clustered position weight matrices
-
2-s2.0-84863378672 10.1093/nar/gkr1252, ARTICLE E38
-
Oh Y. M., Kim J. K., Choi S., Yoo J.-Y., Identification of co-occurring transcription factor binding sites from DNA sequence using clustered position weight matrices. Nucleic Acids Research 2012 40 5, article e38 2-s2.0-84863378672 10.1093/nar/gkr1252
-
(2012)
Nucleic Acids Research
, vol.40
, Issue.5
-
-
Oh, Y.M.1
Kim, J.K.2
Choi, S.3
Yoo, J.-Y.4
-
22
-
-
0037208166
-
TRANSFAC®: Transcriptional regulation, from patterns to profiles
-
DOI 10.1093/nar/gkg108
-
Matys V., Fricke E., Geffers R., Gößling E., Haubrock M., Hehl R., Hornischer K., Karas D., Kel A. E., Kel-Margoulis O. V., Kloos D.-U., Land S., Lewicki-Potapov B., Michael H., Münch R., Reuter I., Rotert S., Saxel H., Scheer M., Thiele S., Wingender E., TRANSFAC: transcriptional regulation, from patterns to profiles. Nucleic Acids Research 2003 31 1 374 378 2-s2.0-0037208166 10.1093/nar/gkg108 (Pubitemid 36150406)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.1
, pp. 374-378
-
-
Matys, V.1
Fricke, E.2
Geffers, R.3
Gossling, E.4
Haubrock, M.5
Hehl, R.6
Hornischer, K.7
Karas, D.8
Kel, A.E.9
Kel-Margoulis, O.V.10
Kloos, D.-U.11
Land, S.12
Lewicki-Potapov, B.13
Michael, H.14
Munch, R.15
Reuter, I.16
Rotert, S.17
Saxel, H.18
Scheer, M.19
Thiele, S.20
Wingender, E.21
more..
-
23
-
-
75549083247
-
JASPAR 2010: The greatly expanded open-access database of transcription factor binding profiles
-
supplement 1 2-s2.0-75549083247 10.1093/nar/gkp950
-
Portales-Casamar E., Thongjuea S., Kwon A. T., Arenillas D., Zhao X., Valen E., Yusuf D., Lenhard B., Wasserman W. W., Sandelin A., JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles. Nucleic Acids Research 2010 38 supplement 1 D105 D110 2-s2.0-75549083247 10.1093/nar/gkp950
-
(2010)
Nucleic Acids Research
, vol.38
-
-
Portales-Casamar, E.1
Thongjuea, S.2
Kwon, A.T.3
Arenillas, D.4
Zhao, X.5
Valen, E.6
Yusuf, D.7
Lenhard, B.8
Wasserman, W.W.9
Sandelin, A.10
-
24
-
-
0037443976
-
Toucan: Deciphering the cis-regulatory logic of coregulated genes
-
DOI 10.1093/nar/gkg268
-
Aerts S., Thijs G., Coessens B., Staes M., Moreau Y., de Moor B., Toucan: deciphering the cis-regulatory logic of coregulated genes. Nucleic Acids Research 2003 31 6 1753 1764 2-s2.0-0037443976 10.1093/nar/gkg268 (Pubitemid 36336577)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.6
, pp. 1753-1764
-
-
Aerts, S.1
Thijs, G.2
Coessens, B.3
Staes, M.4
Moreau, Y.5
De Moor, B.6
-
25
-
-
46049107540
-
Asap: A framework for over-representation statistics for transcription factor binding sites
-
DOI 10.1371/journal.pone.0001623
-
Marstrand T. T., Frellsen J., Moltke I., Thiim M., Valen E., Retelska D., Krogh A., Asap: a framework for over-representation statistics for transcription factor binding sites. PLoS ONE 2008 3 2, article e1623 2-s2.0-46049107540 10.1371/journal.pone.0001623 (Pubitemid 351895083)
-
(2008)
PLoS ONE
, vol.3
, Issue.2
-
-
Marstrand, T.T.1
Frellsen, J.2
Moltke, I.3
Thiim, M.4
Valen, E.5
Retelska, D.6
Krogh, A.7
-
26
-
-
67849114236
-
Pscan: Finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genes
-
supplement 2 2-s2.0-67849114236 10.1093/nar/gkp464
-
Zambelli F., Pesole G., Pavesi G., Pscan: finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genes. Nucleic Acids Research 2009 37 supplement 2 W247 W252 2-s2.0-67849114236 10.1093/nar/gkp464
-
(2009)
Nucleic Acids Research
, vol.37
-
-
Zambelli, F.1
Pesole, G.2
Pavesi, G.3
-
27
-
-
20144370200
-
OPOSSUM: Identification of over-represented transcription factor binding sites in co-expressed genes
-
DOI 10.1093/nar/gki624
-
Sui S. J. H., Mortimer J. R., Arenillas D. J., Brumm J., Walsh C. J., Kennedy B. P., Wasserman W. W., oPOSSUM: identification of over-represented transcription factor binding sites in co-expressed genes. Nucleic Acids Research 2005 33 10 3154 3164 2-s2.0-20144370200 10.1093/nar/gki624 (Pubitemid 41194459)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.10
, pp. 3154-3164
-
-
Ho Sui, S.J.1
Mortimer, J.R.2
Arenillas, D.J.3
Brumm, J.4
Walsh, C.J.5
Kennedy, B.P.6
Wasserman, W.W.7
-
28
-
-
78651293534
-
MiRBase: Integrating microRNA annotation and deep-sequencing data
-
supplement 1 2-s2.0-78651293534 10.1093/nar/gkq1027
-
Kozomara A., Griffiths-Jones S., miRBase: integrating microRNA annotation and deep-sequencing data. Nucleic Acids Research 2011 39 supplement 1 D152 D157 2-s2.0-78651293534 10.1093/nar/gkq1027
-
(2011)
Nucleic Acids Research
, vol.39
-
-
Kozomara, A.1
Griffiths-Jones, S.2
-
29
-
-
84859865967
-
The UCSC Genome Browser database: Extensions and updates 2011
-
supplement 1 2-s2.0-84859865967 10.1093/nar/gkr1055
-
Dreszer T. R., Karolchik D., Zweig A. S., Hinrichs A. S., Raney B. J., Kuhn R. M., Meyer L. R., Wong M., Sloan C. A., Rosenbloom K. R., Roe G., Rhead B., Pohl A., Malladi V. S., Li C. H., Learned K., Kirkup V., Hsu F., Harte R. A., Guruvadoo L., Goldman M., Giardine B. M., Fujita P. A., Diekhans M., Cline M. S., Clawson H., Barber G. P., Haussler D., Kent W. J., The UCSC Genome Browser database: extensions and updates 2011. Nucleic Acids Research 2012 40 supplement 1 D918 D923 2-s2.0-84859865967 10.1093/nar/gkr1055
-
(2012)
Nucleic Acids Research
, vol.40
-
-
Dreszer, T.R.1
Karolchik, D.2
Zweig, A.S.3
Hinrichs, A.S.4
Raney, B.J.5
Kuhn, R.M.6
Meyer, L.R.7
Wong, M.8
Sloan, C.A.9
Rosenbloom, K.R.10
Roe, G.11
Rhead, B.12
Pohl, A.13
Malladi, V.S.14
Li, C.H.15
Learned, K.16
Kirkup, V.17
Hsu, F.18
Harte, R.A.19
Guruvadoo, L.20
Goldman, M.21
Giardine, B.M.22
Fujita, P.A.23
Diekhans, M.24
Cline, M.S.25
Clawson, H.26
Barber, G.P.27
Haussler, D.28
Kent, W.J.29
more..
-
30
-
-
11144358198
-
A gene atlas of the mouse and human protein-encoding transcriptomes
-
DOI 10.1073/pnas.0400782101
-
Su A. I., Wiltshire T., Batalov S., Lapp H., Ching K. A., Block D., Zhang J., Soden R., Hayakawa M., Kreiman G., Cooke M. P., Walker J. R., Hogenesch J. B., A gene atlas of the mouse and human protein-encoding transcriptomes. Proceedings of the National Academy of Sciences of the United States of America 2004 101 16 6062 6067 2-s2.0-11144358198 10.1073/pnas.0400782101 (Pubitemid 38520528)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.16
, pp. 6062-6067
-
-
Su, A.I.1
Wiltshire, T.2
Batalov, S.3
Lapp, H.4
Ching, K.A.5
Block, D.6
Zhang, J.7
Soden, R.8
Hayakawa, M.9
Kreiman, G.10
Cooke, M.P.11
Walker, J.R.12
Hogenesch, J.B.13
-
31
-
-
33846064113
-
NCBI GEO: Mining tens of millions of expression profiles - Database and tools update
-
DOI 10.1093/nar/gkl887
-
Barrett T., Troup D. B., Wilhite S. E., Ledoux P., Rudnev D., Evangelista C., Kim I. F., Soboleva A., Tomashevsky M., Edgar R., NCBI GEO: mining tens of millions of expression profiles-database and tools update. Nucleic Acids Research 2007 35 supplement 1 D760 D765 2-s2.0-33846064113 10.1093/nar/gkl887 (Pubitemid 46056306)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.SUPPL. 1
-
-
Barrett, T.1
Troup, D.B.2
Wilhite, S.E.3
Ledoux, P.4
Rudnev, D.5
Evangelista, C.6
Kim, I.F.7
Soboleva, A.8
Tomashevsky, M.9
Edgar, R.10
-
32
-
-
34347376692
-
Characterization of microRNA expression profiles in normal human tissues
-
DOI 10.1186/1471-2164-8-166
-
Liang Y., Ridzon D., Wong L., Chen C., Characterization of microRNA expression profiles in normal human tissues. BMC Genomics 2007 8, article 166 2-s2.0-34347376692 10.1186/1471-2164-8-166 (Pubitemid 47019476)
-
(2007)
BMC Genomics
, vol.8
, pp. 166
-
-
Liang, Y.1
Ridzon, D.2
Wong, L.3
Chen, C.4
-
33
-
-
0038365368
-
Analysis of microarray data using Z score transformation
-
Cheadle C., Vawter M. P., Freed W. J., Becker K. G., Analysis of microarray data using Z score transformation. The Journal of Molecular Diagnostics 2003 5 2 73 81 2-s2.0-0038365368 (Pubitemid 36553428)
-
(2003)
Journal of Molecular Diagnostics
, vol.5
, Issue.2
, pp. 73-81
-
-
Cheadle, C.1
Vawter, M.P.2
Freed, W.J.3
Becker, K.G.4
-
35
-
-
0041853625
-
MATCH™: A tool for searching transcription factor binding sites in DNA sequences
-
DOI 10.1093/nar/gkg585
-
Kel A. E., Gossling E., Reuter I., Cheremushkin E., Kel-Margoulis O. V., Wingender E., MATCH: a tool for searching transcription factor binding sites in DNA sequences. Nucleic Acids Research 2003 31 13 3576 3579 2-s2.0-0041853625 10.1093/nar/gkg585 (Pubitemid 37442201)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.13
, pp. 3576-3579
-
-
Kel, A.E.1
Gossling, E.2
Reuter, I.3
Cheremushkin, E.4
Kel-Margoulis, O.V.5
Wingender, E.6
-
36
-
-
84864773072
-
MicroRNA-122 plays a critical role in liver homeostasis and hepatocarcinogenesis
-
2-s2.0-84864773072 10.1172/JCI63455
-
Tsai W.-C., Hsu S.-D., Hsu C.-S., Lai T.-C., Chen S.-J., Shen R., Huang Y., Chen H.-C., Lee C.-H., Tsai T.-F., Hsu M.-T., Wu J.-C., Huang H.-D., Shiao M.-S., Hsiao M., Tsou A.-P., MicroRNA-122 plays a critical role in liver homeostasis and hepatocarcinogenesis. The Journal of Clinical Investigation 2012 122 8 2884 2897 2-s2.0-84864773072 10.1172/JCI63455
-
(2012)
The Journal of Clinical Investigation
, vol.122
, Issue.8
, pp. 2884-2897
-
-
Tsai, W.-C.1
Hsu, S.-D.2
Hsu, C.-S.3
Lai, T.-C.4
Chen, S.-J.5
Shen, R.6
Huang, Y.7
Chen, H.-C.8
Lee, C.-H.9
Tsai, T.-F.10
Hsu, M.-T.11
Wu, J.-C.12
Huang, H.-D.13
Shiao, M.-S.14
Hsiao, M.15
Tsou, A.-P.16
-
37
-
-
84860388897
-
Positive regulation of hepatic miR-122 expression by HNF4 α
-
10.1016/j.jhep.2010.12.023
-
Li Z. Y., Xi Y., Zhu W. N., Positive regulation of hepatic miR-122 expression by HNF4 α Journal of Hepatology 2011 55 3 602 611 10.1016/j.jhep.2010.12.023
-
(2011)
Journal of Hepatology
, vol.55
, Issue.3
, pp. 602-611
-
-
Li, Z.Y.1
Xi, Y.2
Zhu, W.N.3
-
38
-
-
70349976819
-
Loss of miR-122 expression in liver cancer correlates with suppression of the hepatic phenotype and gain of metastatic properties
-
2-s2.0-70349976819 10.1038/onc.2009.211
-
Coulouarn C., Factor V. M., Andersen J. B., Durkin M. E., Thorgeirsson S. S., Loss of miR-122 expression in liver cancer correlates with suppression of the hepatic phenotype and gain of metastatic properties. Oncogene 2009 28 40 3526 3536 2-s2.0-70349976819 10.1038/onc.2009.211
-
(2009)
Oncogene
, vol.28
, Issue.40
, pp. 3526-3536
-
-
Coulouarn, C.1
Factor, V.M.2
Andersen, J.B.3
Durkin, M.E.4
Thorgeirsson, S.S.5
-
39
-
-
0023473130
-
A novel steroid thyroid hormone receptor-related gene inappropriately expressed in human hepatocellular carcinoma
-
DOI 10.1038/330667a0
-
de The H., Marchio A., Tiollais P., Dejean A., A novel steroid thyroid hormone receptor-related gene inappropriately expressed in human hepatocellular carcinoma. Nature 1987 330 6149 667 670 2-s2.0-0023473130 (Pubitemid 18005585)
-
(1987)
Nature
, vol.330
, Issue.6149
, pp. 667-670
-
-
De The, H.1
Marchio, A.2
Tiollais, P.3
Dejean, A.4
-
40
-
-
84863191653
-
MicroRNA-224 is up-regulated in hepatocellular carcinoma through epigenetic mechanisms
-
2-s2.0-84863191653 10.1096/fj.11-201855
-
Wang Y., Toh H. C., Chow P., Chung A. Y. F., Meyers D. J., Cole P. A., Ooi L. L. P. J., Lee C. G. L., MicroRNA-224 is up-regulated in hepatocellular carcinoma through epigenetic mechanisms. The FASEB Journal 2012 26 7 3032 3041 2-s2.0-84863191653 10.1096/fj.11-201855
-
(2012)
The FASEB Journal
, vol.26
, Issue.7
, pp. 3032-3041
-
-
Wang, Y.1
Toh, H.C.2
Chow, P.3
Chung, A.Y.F.4
Meyers, D.J.5
Cole, P.A.6
Ooi, L.L.P.J.7
Lee, C.G.L.8
-
41
-
-
79959930131
-
ChIP-Array: Combinatory analysis of ChIP-seq/chip and microarray gene expression data to discover direct/indirect targets of a transcription factor
-
supplement 2 2-s2.0-79959930131 10.1093/nar/gkr332
-
Qin J., Li M. J., Wang P., Zhang M. Q., Wang J., ChIP-Array: combinatory analysis of ChIP-seq/chip and microarray gene expression data to discover direct/indirect targets of a transcription factor. Nucleic Acids Research 2011 39 supplement 2 W430 W436 2-s2.0-79959930131 10.1093/nar/gkr332
-
(2011)
Nucleic Acids Research
, vol.39
-
-
Qin, J.1
Li, M.J.2
Wang, P.3
Zhang, M.Q.4
Wang, J.5
-
42
-
-
77949916244
-
On the detection and refinement of transcription factor binding sites using ChIP-Seq data
-
2-s2.0-77949916244 10.1093/nar/gkp1180
-
Hu M., Yu J., Taylor J. M., Chinnaiyan A. M., Qin Z. S., On the detection and refinement of transcription factor binding sites using ChIP-Seq data. Nucleic Acids Research 2010 38 7 2154 2167 2-s2.0-77949916244 10.1093/nar/gkp1180
-
(2010)
Nucleic Acids Research
, vol.38
, Issue.7
, pp. 2154-2167
-
-
Hu, M.1
Yu, J.2
Taylor, J.M.3
Chinnaiyan, A.M.4
Qin, Z.S.5
-
43
-
-
79955025466
-
A ChIP-Seq benchmark shows that sequence conservation mainly improves detection of strong transcription factor binding sites
-
2-s2.0-79955025466 10.1371/journal.pone.0018430, ARTICLE E18430
-
Handstad T., Rye M. B., Drablos F., Sætrom P., A ChIP-Seq benchmark shows that sequence conservation mainly improves detection of strong transcription factor binding sites. PLoS ONE 2011 6 4, article e18430 2-s2.0-79955025466 10.1371/journal.pone.0018430
-
(2011)
PLoS ONE
, vol.6
, Issue.4
-
-
Handstad, T.1
Rye, M.B.2
Drablos, F.3
Sætrom, P.4
|