Nanophotonic trapping for precise manipulation of biomolecular arrays

Nature Nanotechnology

Volumn 9, Issue 6, 2014, Pages 448-452

  Soltani, Mohammad ^a,b   Lin, Jun ^a,b   Forties, Robert A ^a,b   Inman, James T ^a   Saraf, Summer N ^a   Fulbright, Robert M ^a   Lipson, Michal ^a   Wang, Michelle D ^a,b  

^a Cornell University   (United States)

^b Department of Obstetrics Gynecology   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL MATERIALS; LAMINAR FLOW; NANOPHOTONICS;

CHEMICAL ENVIRONMENT; LAB-ON-A-CHIP APPLICATIONS; MEASUREMENT TECHNIQUES; NANOPHOTONIC WAVEGUIDES; OPTICAL TRAPPING DEVICES; PRECISE MANIPULATION; PRECISION MEASUREMENT; SIMULTANEOUS MONITORING;

EVANESCENT FIELDS;

DNA;

ACCURACY; ARTICLE; CHEMICAL ENVIRONMENT; FLUORESCENCE; LAB ON A CHIP; LAMINAR FLOW; MEASUREMENT; MOLECULE; MONITORING; NANOPHOTONIC TRAPPING; OPTICAL TWEEZERS; PRIORITY JOURNAL; VELOCITY;

LAB-ON-A-CHIP DEVICES; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; OPTICAL TWEEZERS;

EID: 84902250008     PISSN: 17483387     EISSN: 17483395     Source Type: Journal    
DOI: 10.1038/nnano.2014.79     Document Type: Article

References (35)

1. Chu, S. The manipulation of neutral particles. Rev. Mod. Phys. 70, 685-706 (1998).
2. Forth, S., Sheinin, M., Inman, J. &Wang, M. Torque measurement at the singlemolecule level. Annu. Rev. Biophys. 42, 583-604 (2013).
3. Moffitt, J. R., Chemla, Y. R., Smith, S. B. &Bustamante, C. Recent advances in optical tweezers. Annu. Rev. Biochem. 77, 205-228 (2008).
4. Hilario, J. &Kowalczykowski, S. C. Visualizing protein-DNA interactions at the single-molecule level. Curr. Opin. Chem. Biol. 14, 15-22 (2010).
5. Dholakia, K. &Cizmar, T. Shaping the future of manipulation. Nature Photon. 5, 335-342 (2011).
6. Padgett,M. &Bowman, R. Tweezers with a twist. Nature Photon. 5, 343-348 (2011).
7. Jannasch, A., Demirors, A. F., van Oostrum, P. D. J., van Blaaderen, A. &Schaffer, E. Nanonewton optical force trap employing anti-reflection coated, high-refractive-index titania microspheres. Nature Photon. 6, 469-473 (2012).
8. Grier, D. G. A revolution in optical manipulation. Nature 424, 810-816 (2003).
9. Fainman, Y., Psaltis, D. &Yang, C. Optofluidics: Fundamentals, Devices, and Applications Ch. 17 (McGraw-Hill, 2010).
10. Erickson, D., Serey, X., Chen, Y. F. &Mandal, S. Nanomanipulation using near field photonics. Lab on a Chip 11, 995-1009 (2011).
11. Erickson, D., Rockwood, T., Emery, T., Scherer, A. &Psaltis, D. Nanofluidic tuning of photonic crystal circuits. Opt. Lett. 31, 59-61 (2006).
12. Diehl, L. et al. Microfluidic tuning of distributed feedback quantum cascade lasers. Opt. Express 14, 11660-11667 (2006).
13. Psaltis, D., Quake, S. R. &Yang, C. Developing optofluidic technology through the fusion of microfluidics and optics. Nature 442, 381-386 (2006).
14. Juan, M. L., Righini, M. &Quidant, R. Plasmon nano-optical tweezers. Nature Photon. 5, 349-356 (2011).
15. Schmidt, H. &Hawkins, A. R. The photonic integration of non-solid media using optofluidics. Nature Photon. 5, 598-604 (2011).
16. Fan, X. D. &White, I. M. Optofluidic microsystems for chemical and biological analysis. Nature Photon. 5, 591-597 (2011).
17. Molloy, J. E., Burns, J. E., Kendrick-Jones, J., Tregear, R. T. &White, D. C. Movement and force produced by a single myosin head. Nature 378, 209-112 (1995).
18. Farre, A., van der Horst, A., Blab, G. A., Downing, B. P. B. &Forde, N. R. Stretching single DNA molecules to demonstrate high-force capabilities of holographic optical tweezers. J. Biophoton. 3, 224-233 (2010).
19. Yang, A. H. J. et al. Optical manipulation of nanoparticles and biomolecules in sub-wavelength slot waveguides. Nature 457, 71-75 (2009).
20. Lin, S. Y. &Crozier, K. B. Planar silicon microrings as wavelength-multiplexed optical traps for storing and sensing particles. Lab on a Chip 11, 4047-4051 (2011).
21. Lin, S. Y. &Crozier, K. B. An integrated microparticle sorting system based on nearfield optical forces and a structural perturbation. Opt. Express 20, 3367-3374 (2012).
22. Schmidt, B. S., Yang, A. H. J., Erickson, D. &Lipson, M. Optofluidic trapping and transport on solid core waveguides within a microfluidic device. Opt. Express 15, 14322-14334 (2007).
23. Mandal, S., Serey, X. &Erickson, D. Nanomanipulation using silicon photonic crystal resonators. Nano Lett. 10, 99-104 (2010).
24. Renaut, C. et al. On chip shapeable optical tweezers. Sci. Rep. 3, 2290-2293 (2013).
25. Jaquay, E., Martinez, L. J., Mejia, C. A. &Povinelli, M. L. Light-assisted, templated self-assembly using a photonic-crystal slab. Nano Lett. 13, 2290-2294 (2013).
26. Lei, T. &Poon, A. W. Silicon-on-insulator multimode-interference waveguidebased arrayed optical tweezers (SMART) for two-dimensional microparticle trapping and manipulation. Opt. Express 21, 1520-1530 (2013).
27. Soltani, M., Inman, J. T., Lipson, M. &Wang, M. D. Electro-optofluidics: achieving dynamic control on-chip. Opt. Express 20, 22314-22326 (2012).
28. Atabaki, A. H., Hosseini, E. S., Eftekhar, A. A., Yegnanarayanan, S. &Adibi, A. Optimization of metallic microheaters for high-speed reconfigurable silicon photonics. Opt. Express 18, 18312-18323 (2010).
29. Moffitt, J. R., Chemla, Y. R., Izhaky, D. &Bustamante, C. Differential detection of dual traps improves the spatial resolution of optical tweezers. Proc. Natl Acad. Sci. USA 103, 9006-9011 (2006).
30. Abbondanzieri, E. A., Greenleaf,W. J., Shaevitz, J.W., Landick, R. &Block, S. M. Direct observation of base-pair stepping by RNA polymerase. Nature 438, 460-465 (2005).
31. Sun, B. et al. ATP-induced helicase slippage reveals highly coordinated subunits. Nature 478, 132-135 (2011).
32. Forget, A. L., Dombrowski, C. C., Amitani, I. &Kowalczykowski, S. C. Exploring protein-DNA interactions in 3D using in situ construction, manipulation and visualization of individual DNA dumbbells with optical traps, microfluidics and fluorescence microscopy. Nature Protoc. 8, 525-538 (2013).
33. Gelles, J., Schnapp, B. J. &Sheetz, M. P. Tracking kinesin-driven movements with nanometre-scale precision. Nature 331, 450-453 (1988).
34. Fuller, D. N. et al. A general method for manipulating DNA sequences from any organism with optical tweezers. Nucleic Acids Res. 34, e15-e24 (2006).
35. Laib, S., Robertson, R. M. &Smith, D. E. Preparation and characterization of a set of linear DNA molecules for polymer physics and rheology studies. Macromolecules 39, 4115-4119 (2006).