A step-by-step protocol for formaldehyde-assisted isolation of regulatory elements from Arabidopsis thaliana

Journal of Integrative Plant Biology

Volumn 56, Issue 6, 2014, Pages 527-538

  Omidbakhshfard, Mohammad Amin ^a,b   Winck, Flavia Vischi ^a,d   Arvidsson, Samuel ^a,e   Riaño Pachón, Diego M ^c   Mueller Roeber, Bernd ^a,b  

^a UNIVERSITY OF POTSDAM   (Germany)

^b MAX PLANCK INSTITUTE OF MOLECULAR PLANT PHYSIOLOGY   (Germany)

^c BRAZILIAN CENTER FOR RESEARCH IN ENERGY AND MATERIALS CNPEM   (Brazil)

^d BRAZILIAN CENTER FOR RESEARCH IN ENERGY AND MATERIALS CNPEM   (Brazil)

^e LGC Genomics GmbH   (Germany)

Author keywords

Arabidopsis thaliana; Chromatin; cis regulatory elements; Epigenomics; FAIRE qPCR; FAIRE seq; Gene expression; Gene regulatory network; Transcription factor

Indexed keywords

ANGIOSPERM; DNA; FORMALDEHYDE; GENE EXPRESSION; GENOME; GENOMICS; POLYMERASE CHAIN REACTION;

ARABIDOPSIS THALIANA; EUKARYOTA;

FORMALDEHYDE; PLANT DNA;

ARABIDOPSIS; DRUG EFFECTS; ESSENTIAL GENE; GENETICS; HIGH THROUGHPUT SEQUENCING; ISOLATION AND PURIFICATION; MOLECULAR BIOLOGY; PLANT CHROMOSOME; PLANT GENOME; POLYMERASE CHAIN REACTION; PROCEDURES; REGULATORY SEQUENCE; ULTRASOUND;

ARABIDOPSIS; CHROMOSOMES, PLANT; DNA, PLANT; FORMALDEHYDE; GENES, ESSENTIAL; GENOME, PLANT; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; MOLECULAR BIOLOGY; POLYMERASE CHAIN REACTION; REGULATORY SEQUENCES, NUCLEIC ACID; SONICATION;

EID: 84902077702     PISSN: 16729072     EISSN: 17447909     Source Type: Journal    
DOI: 10.1111/jipb.12151     Document Type: Article

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