Effect of dietary forage sources on rumen microbiota, rumen fermentation and biogenic amines in dairy cows

Journal of the Science of Food and Agriculture

Volumn 94, Issue 9, 2014, Pages 1886-1895

  Zhang, Ruiyang ^a   Zhu, Weiyun ^a   Zhu, Wen ^b   Liu, Jianxin ^b   Mao, Shengyong ^a  

^a NANJING AGRICULTURAL UNIVERSITY   (China)

^b ZHEJIANG UNIVERSITY   (China)

Author keywords

Biogenic amines; Dairy cows; Forage sources; Microbiota; Rumen fermentation

Indexed keywords

ANAEROTRUNCUS; BOS; LEYMUS CHINENSIS; MEDICAGO SATIVA; PAPILLIBACTER; PREVOTELLA; SELENOMONAS; STREPTOMYCES;

BIOGENIC AMINE; PROPIONIC ACID DERIVATIVE;

ANIMAL; ANIMAL FOOD; BACTERIA; BOVINAE; DIET; FEMALE; FERMENTATION; GENETICS; HUMAN; LACTATION; MAIZE; MEDICAGO; METABOLISM; MICROBIOLOGY; MICROFLORA; MILK; POACEAE; RUMINANT STOMACH;

ANIMAL FEED; ANIMAL NUTRITIONAL PHYSIOLOGICAL PHENOMENA; ANIMALS; BACTERIA; BIOGENIC AMINES; CATTLE; DIET; FEMALE; FERMENTATION; HUMANS; LACTATION; MEDICAGO; MICROBIOTA; MILK; POACEAE; PROPIONATES; RUMEN; ZEA MAYS;

EID: 84901854591     PISSN: 00225142     EISSN: 10970010     Source Type: Journal    
DOI: 10.1002/jsfa.6508     Document Type: Article

References (58)

1. Russell JB and Rychlik JL, Factors that alter rumen microbial ecology. Science 292:1119-1122 (2001).
2. Kim M, Morrison M and Yu Z, Status of the phylogenetic diversity census of ruminal microbiomes. FEMS Microbiol Ecol 76:49-63 (2011).
3. Zened A, Combes S, Cauquil L, Mariette J, Klopp C, Bouchez O, et al., Microbial ecology of the rumen evaluated by 454 GS FLX pyrosequencing is affected by starch and oil supplementation of diets. FEMS Microbiol Ecol 83:504-514 (2013).
4. Zhu W, Fu Y, Wang B, Wang C, Ye JA, Wu YM, et al., Effects of dietary forage sources on rumen microbial protein synthesis and milk performance in early lactating dairy cows. J Dairy Sci 96:1727-1734 (2013).
5. Li YH, The divergence and convergence of Aneurolepidium chinense steppe and Stipa grandis steppe under the grazing influence in Xilin river valley, Inner Mongolia., Acta Phytoecol Geobot Sin 12:189-196 (1988).
6. Wang RZ, Biomass formation dynamics of Leymus chinensis population affected by grazing. Chin J Appl Ecol 8:505-509 (1997).
7. Khorasani GR, Okine EK and Kennelly JJ, Effects of forage source and amount of concentrate on rumen and intestinal digestion of nutrients in late-lactation cows. J Dairy Sci 84:1156-1165 (2001).
8. Kong Y, Teather R and Forster R, Composition, spatial distribution, and diversity of the bacterial communities in the rumen of cows fed different forages. FEMS Microbiol Ecol 74:612-622 (2010).
9. Pitta DW, Pinchak E, Dowd SE, Osterstock J, Gontcharova V, Youn E, et al., Rumen bacterial diversity dynamics associated with changing from bermudagrass hay to grazed winter wheat diets. Microb Ecol 59:511-522 (2010).
10. Bardócz S, Duguid TJ, Brown DS, Grant G, Pusztai A, White A, et al., The importance of dietary polyamines in cell regeneration and growth. Br J Nutr 73:819-828 (1995).
11. Nocek JE, Bovine acidosis: implications on laminitis. J Dairy Sci 80:1005-1028 (1997).
12. Fusi E, Rossi L, Rebucci R, Cheli F, Di Giancamillo A, Domeneghini C, et al., Administration of biogenic amines to Saanen kids: effects on growth performance, meat quality and gut histology. Small Ruminant Res 53:1-7 (2004).
13. Phuntsok T, Froetschel MA, Amos HE, Zheng M and Huang YW, Biogenic amines in silage, apparent postruminal passage, and the relationship between biogenic amines and digestive function and intake by steers. J Dairy Sci 81:2193-2203 (1998).
14. Zhao TZ and Li HY, Study on ruminal degradation of mainly protein and fiber sources in dairy diets. Contemp Anim Husb 11:29-32 (2009).
15. AOAC, Official Methods of Analysis (16th edn). Association of Official Analytical Chemists, Arlington, VA (1990).
16. Van Soest PJ, Robertson JB and Lewis BA, Methods for dietary fiber, neutral detergent fiber, and nonstarch polysaccharides in relation to animal nutrition. J Dairy Sci 74:3583-3597 (1991).
17. Qin WL, Determination of rumen volatile fatty acids by means of gas chromatography. J Nanjing Agric Coll 4:110-116 (1982) (in Chinese, with English abstract).
18. Weatherburn MW, Phenol-hypochlorite reaction for determination of ammonia. Anal Chem 39:971-974 (1967).
19. Bailey SR, Marr CM and Elliott J, Identification and quantification of amines in the equine caecum. Res Vet Sci 74:113-118 (2003).
20. Sniffen CJ, O'Connor JD, Van Soest PJ, Fox DG and Russell JB, A net carbohydrate and protein system for evaluating cattle diets: II. Carbohydrate and protein availability. J Anim Sci 70:3562-3577 (1992).
21. Zoetendal EG, Akkermans AD and De Vos WM, Temperature gradient gel electrophoresis analysis of 16S rRNA from human fecal samples reveals stable and host-specific communities of active bacteria. Appl Environ Microbiol 64:3854-3859 (1998).
22. Quince C, Lanzen A, Davenport RJ and Turnbaugh PJ, Removing noise from pyrosequenced amplicons. BMC Bioinformatics 12:38 (2011).
23. Pruesse E, Quast C, Knittel K, Fuchs BM, Ludwig W, Peplies J, et al., SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB. Nucleic Acids Res 35:7188-7196 (2007).
24. Chao A, Nonparametric estimation of the number of classes in a population. Scand J Stat 11:265-270 (1984).
25. Magurran AE, Ecological Diversity and Its Measurement. Princeton University Press, Princeton, NJ, pp. 7-45 (1988).
26. Lozupone C and Knight R, UniFrac: a new phylogenetic method for comparing microbial communities. Appl Environ Microbiol 71:8228-8235 (2005).
27. Stock RA, Sindt MH, Parrott JC and Goedeken FK, Effects of grain type, roughage level and monensin level on finishing cattle performance. J Anim Sci 68:3441-3455 (1990).
28. Sudweeks EM, McCullough ME, Sisk LR and Law SE, Effects of concentrate type and level and forage type on chewing time of steers. J Anim Sci 41:219-224 (1975).
29. Beauchemin KA and Buchanan-Smith JG, Effects of dietary neutral detergent fiber concentration and supplementary long hay on chewing activities and milk production of dairy cows. J Dairy Sci 72:2288-2300 (1989).
30. Vermaak HJ, Effect of dietary energy and fiber source on rumen function in feedlot steers. MSc (Agric) Dissertation, University of Pretoria (2011).
31. Allen MS, Relationship between fermentation acid production in the rumen and the requirement for physically effective fiber. J Dairy Sci 80:1447-1462 (1997).
32. Tjardes KE, Buskirk DD, Allen MS, Ames NK, Bourquin LD and Rust SR, Neutral detergent fiber concentration of corn silage and rumen inert bulk influences dry matter intake and ruminal digesta kinetics of growing steers. J Anim Sci 80:833-840 (2002).
33. Javaid A, Shahzad MA, Nisa M and Sarwar M, Ruminal dynamics of ad libitum feeding in buffalo bulls receiving different level of rumen degradable protein. Livest Sci 135:98-102 (2011).
34. Bailey SR, Cunningham FM and Elliott J, Endotoxin and dietary amines may increase plasma 5-hydroxytryptamine in the horse. Equine Vet J 32:497-504 (2000).
35. Wang DS, Zhang RY, Zhu WY and Mao SY, Effects of subacute ruminal acidosis challenges on fermentation and biogenic amines in the rumen of dairy cows. Livest Sci 155:262-272 (2013).
36. Jami E and Mizrahi I, Composition and similarity of bovine rumen microbiota across individual animals. PLoS One 7:e33306 (2012).
37. Hook SE, Steele MA, Northwood KS, Dijkstra J, France J, Wright ADG, et al., Impact of subacute ruminal acidosis (SARA) adaptation and recovery on the density and diversity of bacteria in the rumen of dairy cows. FEMS Microbiol Ecol 78:275-284 (2011).
38. Russell JB and Dombrowski DB, Effect of pH on the efficiency of growth by pure cultures of rumen bacteria in continuous culture. Appl Environ Microbiol 39:604-610 (1980).
39. Khafipour E, Li S, Plaizier JC and Krause DO, Rumen microbiome composition determined using two nutritional models of subacute ruminal acidosis. Appl Environ Microbiol 75:7115-7124 (2009).
40. Mao SY, Zhang RY, Wang DS and Zhu WY, Impact of subacute ruminal acidosis (SARA) adapatation on rumen microbiota in dairy cattle using pyrosequencing. Anaerobe 24:12-19 (2013).
41. Zoetendal EG, Plugge CM, Akkermans ADL and de Vos WM, Victivallis vadensis gen. nov., sp. nov., a sugar-fermenting anaerobe from human faeces. Int J Syst Evol Microbiol 53:211-215 (2003).
42. Limam RD, Bouchez T, Chouari R, Li T, Barkallah I, Landoulsi A, et al., Detection of WWE2-related Lentisphaerae by 16S rRNA gene sequencing and fluorescence in situ hybridization in landfill leachate. Can J Microbiol 56:846-852 (2010).
43. Stevenson DM and Weimer PJ, Dominance of Prevotella and low abundance of classical ruminal bacterial species in the bovine rumen revealed by relative quantification real-time PCR. Appl Microbiol Biotechnol 75:165-174 (2007).
44. Matsui H, Ogata K, Tajima K, Nakamura M, Nagamine T, Aminov RI, et al., Phenotypic characterization of polysaccharidases produced by four Prevotella type strains. Curr Microbiol 41:45-49 (2000).
45. Griswold KE, White BA and Mackie RI, Diversity of extracellular proteolytic activities among Prevotella species from the rumen. Curr Microbiol 39:187-194 (1999).
46. Kabel MA, Yeoman CJ, Han Y, Dodd D, Abbas CA, de Bont JA, et al., Biochemical characterization and relative expression levels of multiple carbohydrate esterases of the xylanolytic rumen bacterium Prevotella ruminicola 23 grown on an ester-enriched substrate. Appl Environ Microbiol 77:5671-5681 (2011).
47. Thoetkiattikul H, Mhuantong W, Laothanachareon T, Tangphatsornruang S, Pattarajinda V, Eurwilaichitr L, et al., Comparative analysis of microbial profiles in cow rumen fed with different dietary fiber by tagged 16S rRNA gene pyrosequencing. Curr Microbiol 67:130-137 (2013).
48. Ricke SC, Martin SA and Nisbet DJ, Ecology, metabolism, and genetics of ruminal selenomonads. Crit Rev Microbiol 22:27-56 (1996).
49. Brown MS, Ponce CH and Pulikanti R, Adaptation of beef cattle to high-concentrate diets: performance and ruminal metabolism. J Anim Sci 84:E25-E33 (2006).
50. Steelman SM, Chowdhary BP, Dowd S, Suchodolski J and Janečka JE, Pyrosequencing of 16S rRNA genes in fecal samples reveals high diversity of hindgut microflora in horses and potential links to chronic laminitis. BMC Vet Res 8:231 (2012).
51. Kobayashi Y, Inclusion of novel bacteria in rumen microbiology: need for basic and applied science. Anim Sci J 77:375-385 (2006).
52. Stiverson J, Morrison M and Yu Z, Populations of select cultured and uncultured bacteria in the rumen of sheep and the effect of diets and ruminal fractions. Int J Microbiol 2011:750613 (2011). DOI: 10.1155/2011/750613.
53. Li RW, Connor EE, Li C, Baldwin VI RL and Sparks ME, Characterization of the rumen microbiota of pre-ruminant calves using metagenomic tools. Environ Microbiol 14:129-139 (2012).
54. Kim HB, Borewicz K, White BA, Singer RS, Sreevatsan S, Tu ZJ, et al., Longitudinal investigation of the age-related bacterial diversity in the feces of commercial pigs. Vet Microbiol 153:124-133 (2011).
55. Chen W, Liu F, Ling Z, Tong X and Xiang C, Human intestinal lumen and mucosa-associated microbiota in patients with colorectal cancer. PloS One 7:e39743 (2012).
56. Morotomi M, Nagai F, Sakon H and Tanaka R, Paraprevotella clara gen. nov., sp. nov. and Paraprevotella xylaniphila sp. nov., members of the family 'Prevotellaceae' isolated from human faeces. Int J Syst Evol Microbiol 59:1895-1900 (2009).
57. Da Silva ER, do Carmo LS and da Silva N, Detection of the enterotoxins A, B, and C genes in Staphylococcus aureus from goat and bovine mastitis in Brazilian dairy herds. Vet Microbiol 106:103-107 (2005).
58. Matsunaga T, Kamata S, Kakiichi N and Uchida K, Characteristics of Staphylococcus aureus isolated from peracute, acute and chronic bovine mastitis. J Vet Med Sci 55:297-300 (1993).