-
1
-
-
79952363727
-
Ebola haemorrhagic fever
-
Feldmann H, Geisbert TW. 2011. Ebola haemorrhagic fever. Lancet 377:849-862. http://dx.doi.org/10.1016/S0140-6736(10)60667-8.
-
(2011)
Lancet
, vol.377
, pp. 849-862
-
-
Feldmann, H.1
Geisbert, T.W.2
-
2
-
-
33646584499
-
Ebola virus: unravelling pathogenesis to combat a deadly disease
-
Hoenen T, Groseth A, Falzarano D, Feldmann H. 2006. Ebola virus: unravelling pathogenesis to combat a deadly disease. Trends Mol. Med. 12:206-215. http://dx.doi.org/10.1016/j.molmed.2006.03.006.
-
(2006)
Trends Mol. Med.
, vol.12
, pp. 206-215
-
-
Hoenen, T.1
Groseth, A.2
Falzarano, D.3
Feldmann, H.4
-
3
-
-
84901360412
-
-
Centers for Disease Control and Prevention. Special Pathogens Branch, outbreak postings. Centers for Disease Control and Prevention, Atlanta, GA. Accessed 11 April 2014
-
Centers for Disease Control and Prevention. Special Pathogens Branch, outbreak postings. Centers for Disease Control and Prevention, Atlanta, GA. http://www.cdc.gov/vhf/ebola/resources/outbreaks.html. Accessed 11 April 2014.
-
-
-
-
4
-
-
47049107589
-
Structure of the Ebola virus glycoprotein bound to an antibody from ahuman survivor
-
Lee JE, Fusco ML, Hessell AJ, Oswald WB, Burton DR, Saphire EO. 2008. Structure of the Ebola virus glycoprotein bound to an antibody from ahuman survivor. Nature 454:177-182. http://dx.doi.org/10.1038/nature07082.
-
(2008)
Nature
, vol.454
, pp. 177-182
-
-
Lee, J.E.1
Fusco, M.L.2
Hessell, A.J.3
Oswald, W.B.4
Burton, D.R.5
Saphire, E.O.6
-
5
-
-
84859897771
-
Anew player in the puzzle of filovirus entry
-
White JM, Schornberg KL. 2012.Anew player in the puzzle of filovirus entry. Nat. Rev. Microbiol. 10:317-322. http://dx.doi.org/10.1038/nrmicro2764.
-
(2012)
Nat. Rev. Microbiol.
, vol.10
, pp. 317-322
-
-
White, J.M.1
Schornberg, K.L.2
-
6
-
-
84857668041
-
Filovirus entry: a novelty in the viral fusion world
-
Hunt CL, Lennemann NJ, Maury W. 2012. Filovirus entry: a novelty in the viral fusion world. Viruses 4:258-275. http://dx.doi.org/10.3390/v4020258.
-
(2012)
Viruses
, vol.4
, pp. 258-275
-
-
Hunt, C.L.1
Lennemann, N.J.2
Maury, W.3
-
7
-
-
73949151882
-
Ebolavirus glycoprotein structure and mechanism of entry
-
Lee JE, Saphire EO. 2009. Ebolavirus glycoprotein structure and mechanism of entry. Future Virol. 4:621-635. http://dx.doi.org/10.2217/fvl.09.56.
-
(2009)
Future Virol.
, vol.4
, pp. 621-635
-
-
Lee, J.E.1
Saphire, E.O.2
-
8
-
-
84859514186
-
Filovirus entry into cells-new insights
-
Miller EH, Chandran K. 2012. Filovirus entry into cells-new insights. Curr. Opin. Virol. 2:206-214. http://dx.doi.org/10.1016/j.coviro.2012.02.015.
-
(2012)
Curr. Opin. Virol.
, vol.2
, pp. 206-214
-
-
Miller, E.H.1
Chandran, K.2
-
9
-
-
78149301316
-
Cellular entry of Ebola virus involves uptake by a macropinocytosis-like mechanism and subsequent trafficking through early and late endosomes
-
Saeed MF, Kolokoltsov AA, Albrecht T, Davey RA. 2010. Cellular entry of Ebola virus involves uptake by a macropinocytosis-like mechanism and subsequent trafficking through early and late endosomes. PLoS Pathog. 6:e1001110. http://dx.doi.org/10.1371/journal.ppat.1001110.
-
(2010)
PLoS Pathog.
, vol.6
-
-
Saeed, M.F.1
Kolokoltsov, A.A.2
Albrecht, T.3
Davey, R.A.4
-
10
-
-
78149355646
-
Ebolavirus is internalized into host cells via macropinocytosis in a viral glycoprotein-dependent manner
-
Nanbo A, Imai M, Watanabe S, Noda T, Takahashi K, Neumann G, Halfmann P, Kawaoka Y. 2010. Ebolavirus is internalized into host cells via macropinocytosis in a viral glycoprotein-dependent manner. PLoS Pathog. 6:e1001121. http://dx.doi.org/10.1371/journal.ppat.1001121.
-
(2010)
PLoS Pathog.
, vol.6
-
-
Nanbo, A.1
Imai, M.2
Watanabe, S.3
Noda, T.4
Takahashi, K.5
Neumann, G.6
Halfmann, P.7
Kawaoka, Y.8
-
11
-
-
33645788357
-
Role of endosomal cathepsins in entry mediated by the Ebola virus glycoprotein
-
Schornberg K, Matsuyama S, Kabsch K, Delos S, Bouton A, White J. 2006. Role of endosomal cathepsins in entry mediated by the Ebola virus glycoprotein. J. Virol. 80:4174-4178. http://dx.doi.org/10.1128/JVI.80.8.4174-4178.2006.
-
(2006)
J. Virol.
, vol.80
, pp. 4174-4178
-
-
Schornberg, K.1
Matsuyama, S.2
Kabsch, K.3
Delos, S.4
Bouton, A.5
White, J.6
-
12
-
-
19144365133
-
Endosomal proteolysis of the Ebola virus glycoprotein is necessary for infection
-
Chandran K, Sullivan NJ, Felbor U, Whelan SP, Cunningham JM. 2005. Endosomal proteolysis of the Ebola virus glycoprotein is necessary for infection. Science 308:1643-1645. http://dx.doi.org/10.1126/science.1110656.
-
(2005)
Science
, vol.308
, pp. 1643-1645
-
-
Chandran, K.1
Sullivan, N.J.2
Felbor, U.3
Whelan, S.P.4
Cunningham, J.M.5
-
13
-
-
80052851832
-
Ebola virus entry requires the cholesterol transporter Niemann-Pick C1
-
(Letter.)
-
Carette JE, Raaben M, Wong AC, Herbert AS, Obernosterer G, Mulherkar N, Kuehne AI, Kranzusch PJ, Griffin AM, Ruthel G, Cin PD, Dye JM, Whelan SP, Chandran K, Brummelkamp TR. 2011. Ebola virus entry requires the cholesterol transporter Niemann-Pick C1. Nature 477: 340-343. (Letter.) http://dx.doi.org/10.1038/nature10348.
-
(2011)
Nature
, vol.477
, pp. 340-343
-
-
Carette, J.E.1
Raaben, M.2
Wong, A.C.3
Herbert, A.S.4
Obernosterer, G.5
Mulherkar, N.6
Kuehne, A.I.7
Kranzusch, P.J.8
Griffin, A.M.9
Ruthel, G.10
Cin, P.D.11
Dye, J.M.12
Whelan, S.P.13
Chandran, K.14
Brummelkamp, T.R.15
-
14
-
-
84859907529
-
Ebola virus entry requires the host-programmed recognition of an intracellular receptor
-
Miller EH, Obernosterer G, Raaben M, Herbert AS, Deffieu MS, Krishnan A, Ndungo E, Sandesara RG, Carette JE, Kuehne AI, Ruthel G, Pfeffer SR, Dye JM, Whelan SP, Brummelkamp TR, Chandran K. 2012. Ebola virus entry requires the host-programmed recognition of an intracellular receptor. EMBO J. 31:1947-1960. http://dx.doi.org/10.1038/emboj.2012.53.
-
(2012)
EMBO J.
, vol.31
, pp. 1947-1960
-
-
Miller, E.H.1
Obernosterer, G.2
Raaben, M.3
Herbert, A.S.4
Deffieu, M.S.5
Krishnan, A.6
Ndungo, E.7
Sandesara, R.G.8
Carette, J.E.9
Kuehne, A.I.10
Ruthel, G.11
Pfeffer, S.R.12
Dye, J.M.13
Whelan, S.P.14
Brummelkamp, T.R.15
Chandran, K.16
-
15
-
-
80052868218
-
Small molecule inhibitors reveal Niemann-Pick C1 is essential for Ebola virus infection
-
Cote M, Misasi J, Ren T, Bruchez A, Lee K, Filone CM, Hensley L, Li Q, Ory D, Chandran K, Cunningham J. 2011. Small molecule inhibitors reveal Niemann-Pick C1 is essential for Ebola virus infection. Nature 477: 344-348. http://dx.doi.org/10.1038/nature10380.
-
(2011)
Nature
, vol.477
, pp. 344-348
-
-
Cote, M.1
Misasi, J.2
Ren, T.3
Bruchez, A.4
Lee, K.5
Filone, C.M.6
Hensley, L.7
Li, Q.8
Ory, D.9
Chandran, K.10
Cunningham, J.11
-
16
-
-
84863393651
-
Cathepsin cleavage potentiates the Ebola virus glycoprotein to undergo a subsequent fusion-relevant conformational change
-
Brecher M, Schornberg KL, Delos SE, Fusco ML, Saphire EO, White JM. 2012. Cathepsin cleavage potentiates the Ebola virus glycoprotein to undergo a subsequent fusion-relevant conformational change. J. Virol. 86:364-372. http://dx.doi.org/10.1128/JVI.05708-11.
-
(2012)
J. Virol.
, vol.86
, pp. 364-372
-
-
Brecher, M.1
Schornberg, K.L.2
Delos, S.E.3
Fusco, M.L.4
Saphire, E.O.5
White, J.M.6
-
17
-
-
84860231517
-
Structural basis for differential neutralization of Ebolaviruses
-
Bale S, Dias JM, Fusco ML, Hashiguchi T, Wong AC, Liu T, Keuhne AI, Li S, Woods VL, Chandran K, Dye JM, Saphire EO. 2012. Structural basis for differential neutralization of Ebolaviruses. Viruses 4:447-470. http://dx.doi.org/10.3390/v4040447.
-
(2012)
Viruses
, vol.4
, pp. 447-470
-
-
Bale, S.1
Dias, J.M.2
Fusco, M.L.3
Hashiguchi, T.4
Wong, A.C.5
Liu, T.6
Keuhne, A.I.7
Li, S.8
Woods, V.L.9
Chandran, K.10
Dye, J.M.11
Saphire, E.O.12
-
18
-
-
0032214714
-
Crystal structure of the Ebola virus membrane fusion subunit, GP2, from the envelope glycoprotein ectodomain
-
Weissenhorn W, CarfiA, Lee KH, Skehel JJ, Wiley DC. 1998. Crystal structure of the Ebola virus membrane fusion subunit, GP2, from the envelope glycoprotein ectodomain. Mol. Cell 2:605-616. http://dx.doi.org/10.1016/S1097-2765(00)80159-8.
-
(1998)
Mol. Cell
, vol.2
, pp. 605-616
-
-
Weissenhorn, W.1
Carfi, A.2
Lee, K.H.3
Skehel, J.J.4
Wiley, D.C.5
-
19
-
-
0036893140
-
Covalent modifications of the Ebola virus glycoprotein
-
Jeffers SA, Sanders DA, Sanchez A. 2002. Covalent modifications of the Ebola virus glycoprotein. J. Virol. 76:12463-12472. http://dx.doi.org/10.1128/JVI.76.24.12463-12472.2002.
-
(2002)
J. Virol.
, vol.76
, pp. 12463-12472
-
-
Jeffers, S.A.1
Sanders, D.A.2
Sanchez, A.3
-
20
-
-
79960606069
-
Structure and function of the complete internal fusion loop from Ebolavirus glycoprotein 2
-
Gregory SM, Harada E, Liang B, Delos SE, White JM, Tamm LK. 2011. Structure and function of the complete internal fusion loop from Ebolavirus glycoprotein 2. Proc. Natl. Acad. Sci. U. S. A. 108:11211-11216. http://dx.doi.org/10.1073/pnas.1104760108.
-
(2011)
Proc. Natl. Acad. Sci. U. S. A.
, vol.108
, pp. 11211-11216
-
-
Gregory, S.M.1
Harada, E.2
Liang, B.3
Delos, S.E.4
White, J.M.5
Tamm, L.K.6
-
21
-
-
0032849336
-
Mutational analysis of the putative fusion domain of Ebola virus glycoprotein
-
Ito H, Watanabe S, Sanchez A, Whitt MA, Kawaoka Y. 1999. Mutational analysis of the putative fusion domain of Ebola virus glycoprotein. J. Virol. 73:8907-8912.
-
(1999)
J. Virol.
, vol.73
, pp. 8907-8912
-
-
Ito, H.1
Watanabe, S.2
Sanchez, A.3
Whitt, M.A.4
Kawaoka, Y.5
-
22
-
-
45849108331
-
Structures and mechanisms of viral membrane fusion proteins: multiple variations on a common theme
-
White JM, Delos SE, Brecher M, Schornberg K. 2008. Structures and mechanisms of viral membrane fusion proteins: multiple variations on a common theme. Crit. Rev. Biochem. Mol. Biol. 43:189-219. http://dx.doi.org/10.1080/10409230802058320.
-
(2008)
Crit. Rev. Biochem. Mol. Biol.
, vol.43
, pp. 189-219
-
-
White, J.M.1
Delos, S.E.2
Brecher, M.3
Schornberg, K.4
-
23
-
-
84874138355
-
Multiple cationic amphiphiles induce a Niemann-PickCphenotype and inhibit Ebola virus entry and infection
-
Shoemaker CJ, Schornberg KL, Delos SE, Scully C, Pajouhesh H, Olinger GG, Johansen LM, White JM. 2013. Multiple cationic amphiphiles induce a Niemann-PickCphenotype and inhibit Ebola virus entry and infection. PLoS One 8:e56265. http://dx.doi.org/10.1371/journal.pone.0056265.
-
(2013)
PLoS One
, vol.8
-
-
Shoemaker, C.J.1
Schornberg, K.L.2
Delos, S.E.3
Scully, C.4
Pajouhesh, H.5
Olinger, G.G.6
Johansen, L.M.7
White, J.M.8
-
24
-
-
11144221586
-
Studies of Ebola virus glycoprotein-mediated entry and fusion by using pseudotyped human immunodeficiency virus type 1 virions: involvement of cytoskeletal proteins and enhancement by tumor necrosis factor alpha
-
Yonezawa A, Cavrois M, Greene WC. 2005. Studies of Ebola virus glycoprotein-mediated entry and fusion by using pseudotyped human immunodeficiency virus type 1 virions: involvement of cytoskeletal proteins and enhancement by tumor necrosis factor alpha. J. Virol. 79:918-926. http://dx.doi.org/10.1128/JVI.79.2.918-926.2005.
-
(2005)
J. Virol.
, vol.79
, pp. 918-926
-
-
Yonezawa, A.1
Cavrois, M.2
Greene, W.C.3
-
25
-
-
0006925492
-
Pure absorption gradient enhanced heteronuclear single quantum correlation spectroscopy with improved sensitivity
-
Kay LE, Keifer P, Saarinen T. 1992. Pure absorption gradient enhanced heteronuclear single quantum correlation spectroscopy with improved sensitivity. J. Am. Chem. Soc. 114:10663-10665. http://dx.doi.org/10.1021/ja00052a088.
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 10663-10665
-
-
Kay, L.E.1
Keifer, P.2
Saarinen, T.3
-
26
-
-
44949267857
-
Improved proton-detected heteronuclear correlation using gradient-enhanced Z and Zz filters
-
John BK, Plant D, Hurd RE. 1993. Improved proton-detected heteronuclear correlation using gradient-enhanced Z and Zz filters. J. Magn. Reson. Ser. A 101:113-117. http://dx.doi.org/10.1006/jmra.1993.1019.
-
(1993)
J. Magn. Reson. Ser. A
, vol.101
, pp. 113-117
-
-
John, B.K.1
Plant, D.2
Hurd, R.E.3
-
27
-
-
44049117010
-
Improved 3D triple-resonance NMR techniques applied to a 31-kDa protein
-
Grzesiek S, Bax A. 1992. Improved 3D triple-resonance NMR techniques applied to a 31-kDa protein. J. Magn. Reson. 96:432-440.
-
(1992)
J. Magn. Reson.
, vol.96
, pp. 432-440
-
-
Grzesiek, S.1
Bax, A.2
-
28
-
-
43949175202
-
Correlation of backbone amide and aliphatic side-chain resonances in C-13/N-15-enriched proteins by isotropic mixing of C-13 magnetization
-
Grzesiek S, Anglister J, Bax A. 1993. Correlation of backbone amide and aliphatic side-chain resonances in C-13/N-15-enriched proteins by isotropic mixing of C-13 magnetization. J. Magn. Reson. Ser. B 101:114-119. http://dx.doi.org/10.1006/jmrb.1993.1019.
-
(1993)
J. Magn. Reson. Ser. B
, vol.101
, pp. 114-119
-
-
Grzesiek, S.1
Anglister, J.2
Bax, A.3
-
29
-
-
84890928276
-
An efficient triple resonance experiment using C-13 isotropic mixing for determining sequence-specific resonance assignments of isotopically-enriched proteins
-
Montelione GT, Lyons BA, Emerson SD, Tashiro M. 1992. An efficient triple resonance experiment using C-13 isotropic mixing for determining sequence-specific resonance assignments of isotopically-enriched proteins. J. Am. Chem. Soc. 114:10974-10975. http://dx.doi.org/10.1021/ja00053a051.
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 10974-10975
-
-
Montelione, G.T.1
Lyons, B.A.2
Emerson, S.D.3
Tashiro, M.4
-
30
-
-
0024449503
-
Backbone dynamics of proteins as studied by N-15 inverse detected heteronuclear NMR-spectroscopy- application to staphylococcal nuclease
-
Kay LE, Torchia DA, Bax A. 1989. Backbone dynamics of proteins as studied by N-15 inverse detected heteronuclear NMR-spectroscopy- application to staphylococcal nuclease. Biochemistry 28:8972-8979. http://dx.doi.org/10.1021/bi00449a003.
-
(1989)
Biochemistry
, vol.28
, pp. 8972-8979
-
-
Kay, L.E.1
Torchia, D.A.2
Bax, A.3
-
31
-
-
44949276869
-
Sensitivity improvement in proton-detected 2-dimensional heteronuclear correlation NMR-spectroscopy
-
Palmer AG, Cavanagh J, Wright PE, Rance M. 1991. Sensitivity improvement in proton-detected 2-dimensional heteronuclear correlation NMR-spectroscopy. J. Magn. Reson. 93:151-170.
-
(1991)
J. Magn. Reson.
, vol.93
, pp. 151-170
-
-
Palmer, A.G.1
Cavanagh, J.2
Wright, P.E.3
Rance, M.4
-
32
-
-
0029400480
-
NMRPipe: a multidimensional spectral processing system based on UNIX pipes
-
Delaglio F, Grzesiek S, Vuister GW, Zhu G, Pfeifer J, Bax A. 1995. NMRPipe: a multidimensional spectral processing system based on UNIX pipes. J. Biomol. NMR 6:277-293.
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.W.3
Zhu, G.4
Pfeifer, J.5
Bax, A.6
-
34
-
-
68349093958
-
TALOS+: a hybrid method for predicting protein backbone torsion angles fromNMRchemical shifts
-
Shen Y, Delaglio F, Cornilescu G, Bax A. 2009. TALOS+: a hybrid method for predicting protein backbone torsion angles fromNMRchemical shifts. J. Biomol. NMR 44:213-223. http://dx.doi.org/10.1007/s10858-009-9333-z.
-
(2009)
J. Biomol. NMR
, vol.44
, pp. 213-223
-
-
Shen, Y.1
Delaglio, F.2
Cornilescu, G.3
Bax, A.4
-
35
-
-
4644340524
-
Automated NMR structure calculation with CYANA
-
Guntert P. 2004. Automated NMR structure calculation with CYANA. Methods Mol. Biol. 278:353-378. http://dx.doi.org/10.1385/1-59259-809-9:353.
-
(2004)
Methods Mol. Biol.
, vol.278
, pp. 353-378
-
-
Guntert, P.1
-
36
-
-
3543012707
-
Crystallography & NMR system: a new software suite for macromolecular structure determination
-
Brunger AT, Adams PD, Clore GM, DeLano WL, Gros P, Grosse-Kunstleve RW, Jiang JS, Kuszewski J, Nilges M, Pannu NS, Read RJ, Rice LM, Simonson T, Warren GL. 1998. Crystallography & NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr. D Biol. Crystallogr. 54:905-921.
-
(1998)
Acta Crystallogr. D Biol. Crystallogr.
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
Read, R.J.11
Rice, L.M.12
Simonson, T.13
Warren, G.L.14
-
37
-
-
0029881007
-
MOLMOL: a program for display and analysis of macromolecular structures
-
Koradi R, Billeter M, Wuthrich K. 1996. MOLMOL: a program for display and analysis of macromolecular structures. J. Mol. Graph. 14:51-55. http://dx.doi.org/10.1016/0263-7855(96)00009-4.
-
(1996)
J. Mol. Graph.
, vol.14
, pp. 51-55
-
-
Koradi, R.1
Billeter, M.2
Wuthrich, K.3
-
39
-
-
0028282555
-
Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation
-
Farrow NA, Muhandiram R, Singer AU, Pascal SM, Kay CM, Gish G, Shoelson SE, Pawson T, Forman-Kay JD, Kay LE. 1994. Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation. Biochemistry 33:5984-6003. http://dx.doi.org/10.1021/bi00185a040.
-
(1994)
Biochemistry
, vol.33
, pp. 5984-6003
-
-
Farrow, N.A.1
Muhandiram, R.2
Singer, A.U.3
Pascal, S.M.4
Kay, C.M.5
Gish, G.6
Shoelson, S.E.7
Pawson, T.8
Forman-Kay, J.D.9
Kay, L.E.10
-
40
-
-
0024356301
-
Rapid measurement of binding constants and heats of binding using a new titration calorimeter
-
Wiseman T, Williston S, Brandts JF, Lin LN. 1989. Rapid measurement of binding constants and heats of binding using a new titration calorimeter. Anal. Biochem. 179:131-137. http://dx.doi.org/10.1016/0003-2697(89)90213-3.
-
(1989)
Anal. Biochem.
, vol.179
, pp. 131-137
-
-
Wiseman, T.1
Williston, S.2
Brandts, J.F.3
Lin, L.N.4
-
41
-
-
0344270184
-
Distribution analysis of membrane penetration by depth dependent fluorescence quenching
-
Ladokhin AS. 1993. Distribution analysis of membrane penetration by depth dependent fluorescence quenching. Biophys. J. 64:A290.
-
(1993)
Biophys. J.
, vol.64
-
-
Ladokhin, A.S.1
-
42
-
-
84875592758
-
GROMACS 4.5: a high-throughput and highly parallel open source mo-lecular simulation toolkit
-
Pronk S, Pall S, Schulz R, Larsson P, Bjelkmar P, Apostolov R, Shirts MR, Smith JC, Kasson PM, van der Spoel D, Hess B, Lindahl E. 2013. GROMACS 4.5: a high-throughput and highly parallel open source mo-lecular simulation toolkit. Bioinformatics 29:845-854. http://dx.doi.org/10.1093/bioinformatics/btt055.
-
(2013)
Bioinformatics
, vol.29
, pp. 845-854
-
-
Pronk, S.1
Pall, S.2
Schulz, R.3
Larsson, P.4
Bjelkmar, P.5
Apostolov, R.6
Shirts, M.R.7
Smith, J.C.8
Kasson, P.M.9
van der Spoel, D.10
Hess, B.11
Lindahl, E.12
-
43
-
-
84869067020
-
Molecular dynamics simulations of phosphatidylcholine membranes: a comparative force field study
-
Piggot TJ, Pineiro A, Khalid S. 2012. Molecular dynamics simulations of phosphatidylcholine membranes: a comparative force field study. J. Chem. Theory Comput. 8:4593-4609. http://dx.doi.org/10.1021/ct3003157.
-
(2012)
J. Chem. Theory Comput.
, vol.8
, pp. 4593-4609
-
-
Piggot, T.J.1
Pineiro, A.2
Khalid, S.3
-
44
-
-
33846086933
-
Canonical sampling through velocity rescaling
-
Bussi G, Donadio D, Parrinello M. 2007. Canonical sampling through velocity rescaling. J. Chem. Phys. 126:014101. http://dx.doi.org/10.1063/1.2408420.
-
(2007)
J. Chem. Phys.
, vol.126
, pp. 014101
-
-
Bussi, G.1
Donadio, D.2
Parrinello, M.3
-
45
-
-
0019707626
-
Polymorphic transitions in singlecrystals- a new molecular-dynamics method
-
Parrinello M, Rahman A. 1981. Polymorphic transitions in singlecrystals- a new molecular-dynamics method. J. Appl. Phys. 52:7182-7190. http://dx.doi.org/10.1063/1.328693.
-
(1981)
J. Appl. Phys.
, vol.52
, pp. 7182-7190
-
-
Parrinello, M.1
Rahman, A.2
-
46
-
-
38749123962
-
P-LINCS: A parallel linear constraint solver for molecular simulation
-
Hess B. 2008. P-LINCS: A parallel linear constraint solver for molecular simulation. J. Chem. Theory Comput. 4:116-122. http://dx.doi.org/10.1021/ct700200b.
-
(2008)
J. Chem. Theory Comput.
, vol.4
, pp. 116-122
-
-
Hess, B.1
-
47
-
-
33846823909
-
Particle mesh Ewald-an N. Log(N) method for Ewald sums in large systems
-
Darden T, York D, Pedersen L. 1993. Particle mesh Ewald-an N. Log(N) method for Ewald sums in large systems. J. Chem. Phys. 98:10089-10092. http://dx.doi.org/10.1063/1.464397.
-
(1993)
J. Chem. Phys.
, vol.98
, pp. 10089-10092
-
-
Darden, T.1
York, D.2
Pedersen, L.3
-
48
-
-
77954256616
-
g_membed: efficient insertion of a membrane protein into an equilibrated lipid bilayer with minimal perturbation
-
Wolf MG, Hoefling M, Aponte-Santamaria C, Grubmuller H, Groenhof G. 2010. g_membed: efficient insertion of a membrane protein into an equilibrated lipid bilayer with minimal perturbation. J. Comput. Chem. 31:2169-2174. http://dx.doi.org/10.1002/jcc.21507.
-
(2010)
J. Comput. Chem.
, vol.31
, pp. 2169-2174
-
-
Wolf, M.G.1
Hoefling, M.2
Aponte-Santamaria, C.3
Grubmuller, H.4
Groenhof, G.5
-
49
-
-
49449113010
-
The MARTINI coarse-grained force field: extension to proteins
-
Monticelli L, Kandasamy SK, Periole X, Larson RG, Tieleman DP, Marrink SJ. 2008. The MARTINI coarse-grained force field: extension to proteins. J. Chem. Theory Comput. 4:819-834. http://dx.doi.org/10.1021/ct700324x.
-
(2008)
J. Chem. Theory Comput.
, vol.4
, pp. 819-834
-
-
Monticelli, L.1
Kandasamy, S.K.2
Periole, X.3
Larson, R.G.4
Tieleman, D.P.5
Marrink, S.J.6
-
50
-
-
34547474332
-
The MARTINI force field: coarse grained model for biomolecular simulations
-
Marrink SJ, Risselada HJ, Yefimov S, Tieleman DP, de Vries AH. 2007. The MARTINI force field: coarse grained model for biomolecular simulations. J. Phys. Chem. B 111:7812-7824. http://dx.doi.org/10.1021/jp071097f.
-
(2007)
J. Phys. Chem. B
, vol.111
, pp. 7812-7824
-
-
Marrink, S.J.1
Risselada, H.J.2
Yefimov, S.3
Tieleman, D.P.4
de Vries, A.H.5
-
51
-
-
77950584902
-
Software news and update reconstruction of atomistic details from coarse-grained structures
-
Rzepiela AJ, Schafer LV, Goga N, Risselada HJ, De Vries AH, Marrink SJ. 2010. Software news and update reconstruction of atomistic details from coarse-grained structures. J. Comput. Chem. 31:1333-1343. http://dx.doi.org/10.1002/jcc.21415.
-
(2010)
J. Comput. Chem.
, vol.31
, pp. 1333-1343
-
-
Rzepiela, A.J.1
Schafer, L.V.2
Goga, N.3
Risselada, H.J.4
De Vries, A.H.5
Marrink, S.J.6
-
52
-
-
74249102461
-
Fast-time scale dynamics of outer membrane protein A by extended model-free analysis of NMR relaxation data
-
Liang B, Arora A, Tamm LK. 2010. Fast-time scale dynamics of outer membrane protein A by extended model-free analysis of NMR relaxation data. Biochim. Biophys. Acta 1798:68-76. http://dx.doi.org/10.1016/j.bbamem.2009.07.022.
-
(2010)
Biochim. Biophys. Acta
, vol.1798
, pp. 68-76
-
-
Liang, B.1
Arora, A.2
Tamm, L.K.3
-
53
-
-
84870604188
-
pH-triggered, activated-state conformations of the influenza hemagglutinin fusion peptide revealed by NMR
-
Lorieau JL, Louis JM, Schwieters CD, Bax A. 2012. pH-triggered, activated-state conformations of the influenza hemagglutinin fusion peptide revealed by NMR. Proc. Natl. Acad. Sci. U. S. A. 109:19994-19999. http://dx.doi.org/10.1073/pnas.1213801109.
-
(2012)
Proc. Natl. Acad. Sci. U. S. A.
, vol.109
, pp. 19994-19999
-
-
Lorieau, J.L.1
Louis, J.M.2
Schwieters, C.D.3
Bax, A.4
-
54
-
-
0033586718
-
Time-resolved distance determination by tryptophan fluorescence quenching: probing intermediates in membrane protein folding
-
Kleinschmidt JH, Tamm LK. 1999. Time-resolved distance determination by tryptophan fluorescence quenching: probing intermediates in membrane protein folding. Biochemistry 38:4996-5005. http://dx.doi.org/10.1021/bi9824644.
-
(1999)
Biochemistry
, vol.38
, pp. 4996-5005
-
-
Kleinschmidt, J.H.1
Tamm, L.K.2
-
55
-
-
78649817910
-
Glycoprotein organization of Chikungunya virus particles revealed by X-ray crystallography
-
Voss JE, Vaney MC, Duquerroy S, Vonrhein C, Girard-Blanc C, Crublet E, Thompson A, Bricogne G, Rey FA. 2010. Glycoprotein organization of Chikungunya virus particles revealed by X-ray crystallography. Nature 468:709-712. http://dx.doi.org/10.1038/nature09555.
-
(2010)
Nature
, vol.468
, pp. 709-712
-
-
Voss, J.E.1
Vaney, M.C.2
Duquerroy, S.3
Vonrhein, C.4
Girard-Blanc, C.5
Crublet, E.6
Thompson, A.7
Bricogne, G.8
Rey, F.A.9
-
56
-
-
84867453365
-
NMR structure, localization, and vesicle fusion of Chikungunya virus fusion peptide
-
Mohanram H, Nip A, Domadia PN, Bhunia A, Bhattacharjya S. 2012. NMR structure, localization, and vesicle fusion of Chikungunya virus fusion peptide. Biochemistry 51:7863-7872. http://dx.doi.org/10.1021/bi300901f.
-
(2012)
Biochemistry
, vol.51
, pp. 7863-7872
-
-
Mohanram, H.1
Nip, A.2
Domadia, P.N.3
Bhunia, A.4
Bhattacharjya, S.5
-
57
-
-
69549116106
-
Interaction of the dengue virus fusion peptide with membranes assessed by NMR: the essential role of the envelope protein Trp101 for membrane fusion
-
Melo MN, Sousa FJ, Carneiro FA, Castanho MA, Valente AP, Almeida FC, Da Poian AT, Mohana-Borges R. 2009. Interaction of the dengue virus fusion peptide with membranes assessed by NMR: the essential role of the envelope protein Trp101 for membrane fusion. J. Mol. Biol. 392: 736-746. http://dx.doi.org/10.1016/j.jmb.2009.07.035.
-
(2009)
J. Mol. Biol.
, vol.392
, pp. 736-746
-
-
Melo, M.N.1
Sousa, F.J.2
Carneiro, F.A.3
Castanho, M.A.4
Valente, A.P.5
Almeida, F.C.6
Da Poian, A.T.7
Mohana-Borges, R.8
-
58
-
-
33751223215
-
Crystal structure of the West Nile virus envelope glycoprotein
-
Nybakken GE, Nelson CA, Chen BR, Diamond MS, Fremont DH. 2006. Crystal structure of the West Nile virus envelope glycoprotein. J. Virol. 80:11467-11474. http://dx.doi.org/10.1128/JVI.01125-06.
-
(2006)
J. Virol.
, vol.80
, pp. 11467-11474
-
-
Nybakken, G.E.1
Nelson, C.A.2
Chen, B.R.3
Diamond, M.S.4
Fremont, D.H.5
-
59
-
-
1842526097
-
Structure of a flavivirus envelope glycoprotein in its low-pH-induced membrane fusion conformation
-
Bressanelli S, Stiasny K, Allison SL, Stura EA, Duquerroy S, Lescar J, Heinz FX, Rey FA. 2004. Structure of a flavivirus envelope glycoprotein in its low-pH-induced membrane fusion conformation. EMBO J. 23:728-738. http://dx.doi.org/10.1038/sj.emboj.7600064.
-
(2004)
EMBO J.
, vol.23
, pp. 728-738
-
-
Bressanelli, S.1
Stiasny, K.2
Allison, S.L.3
Stura, E.A.4
Duquerroy, S.5
Lescar, J.6
Heinz, F.X.7
Rey, F.A.8
-
60
-
-
33746005904
-
Crystal structure of glycoprotein B from herpes simplex virus 1
-
Heldwein EE, Lou H, Bender FC, Cohen GH, Eisenberg RJ, Harrison SC. 2006. Crystal structure of glycoprotein B from herpes simplex virus 1. Science 313:217-220. http://dx.doi.org/10.1126/science.1126548.
-
(2006)
Science
, vol.313
, pp. 217-220
-
-
Heldwein, E.E.1
Lou, H.2
Bender, F.C.3
Cohen, G.H.4
Eisenberg, R.J.5
Harrison, S.C.6
-
61
-
-
78649413011
-
Structural basis of local, pH-dependent conformational changes in glycoprotein B from herpes simplex virus type 1
-
Stampfer SD, Lou H, Cohen GH, Eisenberg RJ, Heldwein EE. 2010. Structural basis of local, pH-dependent conformational changes in glycoprotein B from herpes simplex virus type 1. J. Virol. 84:12924-12933. http://dx.doi.org/10.1128/JVI.01750-10.
-
(2010)
J. Virol.
, vol.84
, pp. 12924-12933
-
-
Stampfer, S.D.1
Lou, H.2
Cohen, G.H.3
Eisenberg, R.J.4
Heldwein, E.E.5
-
62
-
-
77950513683
-
Bimolecular complementation defines functional regions of herpes simplex virus gB that are involved with gH/gL as a necessary step leading to cell fusion
-
Atanasiu D, Whitbeck JC, de Leon MP, Lou H, Hannah BP, Cohen GH, Eisenberg RJ. 2010. Bimolecular complementation defines functional regions of herpes simplex virus gB that are involved with gH/gL as a necessary step leading to cell fusion. J. Virol. 84:3825-3834. http://dx.doi.org/10.1128/JVI.02687-09.
-
(2010)
J. Virol.
, vol.84
, pp. 3825-3834
-
-
Atanasiu, D.1
Whitbeck, J.C.2
de Leon, M.P.3
Lou, H.4
Hannah, B.P.5
Cohen, G.H.6
Eisenberg, R.J.7
-
63
-
-
84872973964
-
Functional and evolutionary insight from the crystal structure of rubella virus protein E1
-
DuBois RM, Vaney MC, Tortorici MA, Al Kurdi R, Barba-Spaeth G, Krey T, Rey FA. 2013. Functional and evolutionary insight from the crystal structure of rubella virus protein E1. Nature 493:552-556. http://dx.doi.org/10.1038/nature11741.
-
(2013)
Nature
, vol.493
, pp. 552-556
-
-
DuBois, R.M.1
Vaney, M.C.2
Tortorici, M.A.3
Al Kurdi, R.4
Barba-Spaeth, G.5
Krey, T.6
Rey, F.A.7
-
64
-
-
0032583172
-
Membrane fusion mediated by baculovirus gp64 involves assembly of stable gp64 trimers into multiprotein aggregates
-
Markovic I, Pulyaeva H, SokoloffA, Chernomordik LV. 1998. Membrane fusion mediated by baculovirus gp64 involves assembly of stable gp64 trimers into multiprotein aggregates. J. Cell Biol. 143:1155-1166. http://dx.doi.org/10.1083/jcb.143.5.1155.
-
(1998)
J. Cell Biol.
, vol.143
, pp. 1155-1166
-
-
Markovic, I.1
Pulyaeva, H.2
Sokoloff, A.3
Chernomordik, L.V.4
-
65
-
-
0033543577
-
Altered flexibility in the substrate-binding site of related native and engineered high-alkaline Bacillus subtilisins
-
Mulder FA, Schipper D, Bott R, Boelens R. 1999. Altered flexibility in the substrate-binding site of related native and engineered high-alkaline Bacillus subtilisins. J. Mol. Biol. 292:111-123. http://dx.doi.org/10.1006/jmbi.1999.3034.
-
(1999)
J. Mol. Biol.
, vol.292
, pp. 111-123
-
-
Mulder, F.A.1
Schipper, D.2
Bott, R.3
Boelens, R.4
|