Gastroenteritis outbreaks caused by a DS-1-like G1P[8] Rotavirus strain, Japan, 2012-2013

Emerging Infectious Diseases

Volumn 20, Issue 6, 2014, Pages 1030-1033

  Yamamoto, Seiji P ^a   Kaida, Atsushi ^a   Kubo, Hideyuki ^a   Iritani, Nobuhiro ^a  

^a OSAKA CITY INSTITUTE OF PUBLIC HEALTH AND ENVIRONMENTAL SCIENCES   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; ENZYME LINKED IMMUNOSORBENT ASSAY; GASTROENTERITIS; HUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYMERASE CHAIN REACTION; PREVALENCE; RNA EXTRACTION; ROTAVIRUS; ROTAVIRUS A GENOTYPE G1P[8]; VIRUS STRAIN; VIRUS TRANSMISSION; CHILD; CLASSIFICATION; EPIDEMIC; EPIDEMIOLOGY; GENETIC REASSORTMENT; GENETICS; GENOTYPE; INFANT; ISOLATION AND PURIFICATION; JAPAN; PRESCHOOL CHILD; ROTAVIRUS INFECTIONS; VIROLOGY; VIRUS GENOME;

VIRUS RNA;

CHILD; CHILD, PRESCHOOL; DISEASE OUTBREAKS; GASTROENTERITIS; GENOME, VIRAL; GENOTYPE; HUMANS; INFANT; JAPAN; REASSORTANT VIRUSES; RNA, VIRAL; ROTAVIRUS; ROTAVIRUS INFECTIONS;

EID: 84901062921     PISSN: 10806040     EISSN: 10806059     Source Type: Journal    
DOI: 10.3201/eid2006.131326     Document Type: Article

References (11)

1. Parashar UD, Burton A, Lanata C, Boschi-Pinto C, Shibuya K, Steele D, et al. Global mortality associated with rotavirus disease among children in 2004. J Infect Dis. 2009;200(Suppl 1):S9-15. http://dx.doi.org/10.1086/605025
2. O'Ryan M. The ever-changing landscape of rotavirus serotypes. Pediatr Infect Dis J. 2009;28(Suppl):S60-2. http://dx.doi. org/10.1097/INF.0b013e3181967c29
3. Matthijnssens J, Ciarlet M, Rahman M, Attoui H, Banyai K, Estes MK, et al. Recommendations for the classification of group A rotaviruses using all 11 genomic RNA segments. Arch Virol. 2008;153:1621-9. http://dx.doi.org/10.1007/s00705-008-0155-1
4. Matthijnssens J, Ciarlet M, Heiman E, Arijs I, Delbeke T, McDonald SM, et al. Full genome-based classification of rotaviruses reveals a common origin between human Wa-like and porcine rotavirus strains and human DS-1-like and bovine rotavirus strains. J Virol. 2008;82:3204-19. http://dx.doi. org/10.1128/JVI.02257-07
5. McDonald SM, Matthijnssens J, McAllen JK, Hine E, Overton L, Wang S, et al. Evolutionary dynamics of human rotaviruses: balancing reassortment with preferred genome constellations. PLoS Pathog. 2009;5:e1000634. http://dx.doi.org/10.1371/journal. ppat.1000634
6. Fujii Y, Shimoike T, Takagi H, Murakami K, Todaka-Takai R, Park Y, et al. Amplification of all 11 RNA segments of group A rotaviruses based on reverse transcription polymerase chain reaction. Microbiol Immunol. 2012;56:630-8. http://dx.doi.org/10.1111/ j.1348-0421.2012.00479.x
7. Maes P, Matthijnssens J, Rahman M, Van Ranst M. RotaC: a webbased tool for the complete genome classification of group A rotaviruses. BMC Microbiol. 2009;9:238. http://dx.doi.org/10.1186/1471-2180-9-238
8. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: Molecular Evolutionary Genetics Analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol. 2011;28:2731-9. http://dx.doi.org/10.1093/ molbev/msr121
9. Aoki ST, Settembre EC, Trask SD, Greenberg HB, Harrison SC, Dormitzer PR. Structure of rotavirus outer-layer protein VP7 bound with a neutralizing Fab. Science. 2009;324:1444-7. http://dx.doi. org/10.1126/science.1170481
10. Zeller M, Patton JT, Heylen E, De Coster S, Ciarlet M, Van Ranst M, et al. Genetic analyses reveal differences in the VP7 and VP4 antigenic epitopes between human rotaviruses circulating in Belgium and rotaviruses in Rotarix and RotaTeq. J Clin Microbiol. 2012;50:966-76. http://dx.doi.org/10.1128/JCM.05590-11
11. Kuzuya M, Fujii R, Hamano M, Kida K, Mizoguchi Y, Kanadani T, et al. Prevalence and molecular characterization of G1P[8] human rotaviruses possessing DS-1-like VP6, NSP4, and NSP5/6 in Japan. J Med Virol. 2013. Epub 2013 Sep 16. http://dx.doi.org/10.1002/ jmv.23746