-
1
-
-
84873186179
-
Deciphering signatures of mutational processes operative in human cancer
-
Alexandrov LB, Nik-Zainal S, Wedge DC, Campbell PJ, Stratton MR (2013) Deciphering signatures of mutational processes operative in human cancer. Cell Rep 3(1): 246-259.
-
(2013)
Cell Rep
, vol.3
, Issue.1
, pp. 246-259
-
-
Alexandrov, L.B.1
Nik-Zainal, S.2
Wedge, D.C.3
Campbell, P.J.4
Stratton, M.R.5
-
2
-
-
84869040744
-
Human tribbles 3 protects nu clear dna from cytidine deamination by apobec3a
-
Aynaud MM, Suspene R, Vidalain PO, Mussil B, Guetard D, Tangy F, Wain-Hobson S, Vartanian JP (2012) Human Tribbles 3 protects nu clear DNA from cytidine deamination by APOBEC3A. J Biol Chem 287(46): 39182-39192.
-
(2012)
J Biol Chem
, vol.287
, Issue.46
, pp. 39182-39192
-
-
Aynaud, M.M.1
Suspene, R.2
Vidalain, P.O.3
Mussil, B.4
Guetard, D.5
Tangy, F.6
Wain-Hobson, S.7
Vartanian, J.P.8
-
3
-
-
1542328859
-
Comparison of the differentia l context-dependence of dna deamination by apobec enzymes: Correlation with mutation spectra in vivo
-
Beale RC, Petersen-Mahrt SK, Watt IN, Harris RS, Rada C, Neuberger MS (2004) Comparison of the differentia l context-dependence of DNA deamination by APOBEC enzymes: Correlation with mutation spectra in vivo. J Mol Biol 337(3): 585-596.
-
(2004)
J Mol Biol
, vol.337
, Issue.3
, pp. 585-596
-
-
Beale, R.C.1
Petersen-Mahrt, S.K.2
Watt, I.N.3
Harris, R.S.4
Rada, C.5
Neuberger, M.S.6
-
4
-
-
4143092717
-
Cytidine deamination of retroviral dna by diverse apobec proteins
-
Bishop KN, Holmes RK, Sheehy AM, Davidson NO, Cho SJ, Malim MH (2004) Cytidine deamination of retroviral DNA by diverse APOBEC proteins. Curr Biol 14(15): 1392-1396.
-
(2004)
Curr Biol
, vol.14
, Issue.15
, pp. 1392-1396
-
-
Bishop, K.N.1
Holmes, R.K.2
Sheehy, A.M.3
Davidson, N.O.4
Cho, S.J.5
Malim, M.H.6
-
5
-
-
33745541663
-
Interferon-inducible expression of APOBEC3 editing enzymes in human hepatocytes and inhibition of hepatitis B virus replication
-
Bonvin M, Achermann F, Greeve I, Stroka D, Keogh A, Inderbitzin D, Candinas D, Sommer P, Wain-Hobson S, Vartanian JP, Greeve J ( 2006) Interferon-inducible expression of APOBEC3 editing enzymes in human hepatocytes and inhibition of hepatitis B virus replication. Hepatology 43(6): 1364-1374.
-
(2006)
Hepatology
, vol.43
, Issue.6
, pp. 1364-1374
-
-
Bonvin, M.1
Achermann, F.2
Greeve, I.3
Stroka, D.4
Keogh, A.5
Inderbitzin, D.6
Candinas, D.7
Sommer, P.8
Wain-Hobson, S.9
Vartanian, J.P.10
Greeve, J.11
-
6
-
-
84874188583
-
Apobec3b is an enzymatic source of mutation in breast cancer
-
Burns MB, Lackey L, Carpenter MA, Rathore A, Land AM, Leonard B, Refsland EW, Kotandeniya D, Tretyakova N, Nikas JB, Yee D, Temiz NA, Donohue DE, McDougle RM, Brown WL, Law EK, Harris RS (2013a) APOBEC3B is an enzymatic source of mutation in breast cancer. Nature 494(7437): 366-370.
-
(2013)
Nature
, vol.494
, Issue.7437
, pp. 366-370
-
-
Burns, M.B.1
Lackey, L.2
Carpenter, M.A.3
Rathore, A.4
Land, A.M.5
Leonard, B.6
Refsland, E.W.7
Kotandeniya, D.8
Tretyakova, N.9
Nikas, J.B.10
Yee, D.11
Temiz, N.A.12
Donohue, D.E.13
McDougle, R.M.14
Brown, W.L.15
Law, E.K.16
Harris, R.S.17
-
7
-
-
84883356320
-
Evidence for apobec3b mutagenesis in multiple human cancers
-
Burns MB, Temiz NA, Harris RS (2013b) Evidence for APOBEC3B mutagenesis in multiple human cancers. Nat Genet 45(9): 977-983.
-
(2013)
Nat Genet
, vol.45
, Issue.9
, pp. 977-983
-
-
Burns, M.B.1
Temiz, N.A.2
Harris, R.S.3
-
8
-
-
84867266936
-
Methylcytos ine and normal cytosine deamination by the foreign dna restriction enzyme apobec3a
-
Carpenter MA, Li M, Rathore A, Lackey L, Law EK, Land AM, Leonard B, Shandilya SM, Bohn MF, Schiffer CA, Brown WL, Harris RS (2012) Methylcytos ine and normal cytosine deamination by the foreign dna restriction enzyme APOBEC3A. J Biol Chem 287(41): 34801-34808.
-
(2012)
J Biol Chem
, vol.287
, Issue.41
, pp. 34801-34808
-
-
Carpenter, M.A.1
Li, M.2
Rathore, A.3
Lackey, L.4
Law, E.K.5
Land, A.M.6
Leonard, B.7
Shandilya, S.M.8
Bohn, M.F.9
Schiffer, C.A.10
Brown, W.L.11
Harris, R.S.12
-
10
-
-
48549091046
-
Methylation mediated silencing of microrna-1 gene and its role in hepatocellular carcinogenesis
-
Datta J, Kutay H, Nasser MW, Nuovo GJ, Wang B, Majumder S, Liu CG, Volinia S, Croce CM, Schmittgen TD, Ghoshal K, Jacob ST (2008) Methylation mediated silencing of microRNA-1 gene and its role in hepatocellular carcinogenesis. Cancer Res 68(13): 5049-5058.
-
(2008)
Cancer Res
, vol.68
, Issue.13
, pp. 5049-5058
-
-
Datta, J.1
Kutay, H.2
Nasser, M.W.3
Nuovo, G.J.4
Wang, B.5
Majumder, S.6
Liu, C.G.7
Volinia, S.8
Croce, C.M.9
Schmittgen, T.D.10
Ghoshal, K.11
Jacob, S.T.12
-
11
-
-
34249790004
-
Molecular mechanisms of antibody somatic hypermutation
-
Di Noia JM, Neuberger MS (2007) Molecular mechanisms of antibody somatic hypermutation. Annu Rev Biochem 76: 1-22.
-
(2007)
Annu Rev Biochem
, vol.76
, pp. 1-22
-
-
Di Noia, J.M.1
Neuberger, M.S.2
-
12
-
-
0026207466
-
DNA polymerase fidelity and the polymerase chain reaction
-
Eckert KA, Kunkel TA (1991) DNA polymerase fidelity and the polymerase chain reaction. PCR Methods Appl 1(1): 17-24.
-
(1991)
PCR Methods Appl
, vol.1
, Issue.1
, pp. 17-24
-
-
Eckert, K.A.1
Kunkel, T.A.2
-
13
-
-
0027491535
-
Effect of reaction ph on the fidelity and processivity of exonuclease-deficient klenow polymerase
-
Ec kert KA, Kunkel TA (1993) Effect of reaction pH on the fidelity and processivity of exonuclease-deficient Klenow polymerase. J Biol Chem 268(18): 13462-13471.
-
(1993)
J Biol Chem
, vol.268
, Issue.18
, pp. 13462-13471
-
-
Eckert, K.A.1
Kunkel, T.A.2
-
14
-
-
34547941093
-
Expression of activation-induced cytidine deaminase in human hepatocytes via nf-kappab signaling
-
Endo Y, Marusawa H, Kinoshita K, M orisawa T, Sakurai T, Okazaki IM, Watashi K, Shimotohno K, Honjo T, Chiba T (2007) Expression of activation-induced cytidine deaminase in human hepatocytes via NF-kappaB signaling. Oncogene 26(38): 55 87-5595.
-
(2007)
Oncogene
, vol.26
, Issue.38
, pp. 5587-5595
-
-
Endo, Y.1
Marusawa, H.2
Kinoshita, K.3
Morisawa, T.4
Sakurai, T.5
Okazaki, I.M.6
Watashi, K.7
Shimotohno, K.8
Honjo, T.9
Chiba, T.10
-
15
-
-
33947101019
-
Patterns of somatic mutation in human cancer genomes
-
Greenman C, Stephens P, Smith R, Dalgliesh GL, Hunter C, Bignell G, Davies H, Teague J, Butler A, Stevens C, Edkins S, O?Meara S, Vastrik I, Schmidt EE, Avis T, Barthorpe S , Bhamra G, Buck G, Choudhury B, Clements J, Cole J, Dicks E, Forbes S, Gray K, Halliday K, Harrison R, Hills K, Hinton J, Jenkinson A, Jones D, Menzies A, Mironenko T, Perry J, Raine K, Richardson D, Shepherd R, Small A, Toft s C, Varian J, Webb T, West S, Widaa S, Yates A, Cahill DP, Louis DN, Goldstraw P, Nicholson AG, Brasseur F, Looijenga L, Weber BL, Chiew YE, DeFazio A, Greaves MF, Green AR, Campbell P, Birney E, Easton DF, Chenevix-Trench G, Tan MH, Khoo SK, Teh BT, Yuen ST, Leung SY, Wooster R, Futreal PA, Stratton MR (2007) Patterns of somatic mutation in human cancer genomes. Nature 446(7132): 153-158.
-
(2007)
Nature
, vol.446
, Issue.7132
, pp. 153-158
-
-
Greenman, C.1
Stephens, P.2
Smith, R.3
Dalgliesh, G.L.4
Hunter, C.5
Bignell, G.6
Davies, H.7
Teague, J.8
Butler, A.9
Stevens, C.10
Edkins, S.11
Omeara, S.12
Vastrik, I.13
Schmidt, E.E.14
Avis, T.15
Barthorpe, S.16
Bhamra, G.17
Buck, G.18
Choudhury, B.19
Clements, J.20
Cole, J.21
Dicks, E.22
Forbes, S.23
Gray, K.24
Halliday, K.25
Harrison, R.26
Hills, K.27
Hinton, J.28
Jenkinson, A.29
Jones, D.30
Menzies, A.31
Mironenko, T.32
Perry, J.33
Raine, K.34
Richardson, D.35
Shepherd, R.36
Small, A.37
Tofts, C.38
Varian, J.39
Webb, T.40
West, S.41
Widaa, S.42
Yates, A.43
Cahill, D.P.44
Louis, D.N.45
Goldstraw, P.46
Nicholson, A.G.47
Brasseur, F.48
Looijenga, L.49
Weber, B.L.50
Chiew, Y.E.51
Defazio, A.52
Greaves, M.F.53
Green, A.R.54
Campbell, P.55
Birney, E.56
Easton, D.F.57
Chenevix-Trench, G.58
Tan, M.H.59
Khoo, S.K.60
Teh, B.T.61
Yuen, S.T.62
Leung, S.Y.63
Wooster, R.64
Futreal, P.A.65
Stratton, M.R.66
more..
-
16
-
-
0038681901
-
DNA deamination mediates innate immunity to retroviral infection
-
Harris RS, Bishop KN, Sheehy AM, Craig HM, Petersen-Mahr t SK, Watt IN, Neuberger MS, Malim MH (2003) DNA deamination mediates innate immunity to retroviral infection. Cell 113(6): 803-809.
-
(2003)
Cell
, vol.113
, Issue.6
, pp. 803-809
-
-
Harris, R.S.1
Bishop, K.N.2
Sheehy, A.M.3
Craig, H.M.4
Petersen-Mahrt, S.K.5
Watt, I.N.6
Neuberger, M.S.7
Malim, M.H.8
-
17
-
-
59249086363
-
Genetic editing of hbv dna by monodomain human apobec3 cytidine deaminases and the recombinant nature of apobec3g
-
Henry M, Guetard D, Suspene R, Rusniok C, Wain-H obson S, Vartanian JP (2009) Genetic editing of HBV DNA by monodomain human APOBEC3 cytidine deaminases and the recombinant nature of APOBEC3G. PLoS One 4(1): E4277.
-
(2009)
PLoS One
, vol.4
, Issue.1
-
-
Henry, M.1
Guetard, D.2
Suspene, R.3
Rusniok, C.4
Wain-H Obson, S.5
Vartanian, J.P.6
-
18
-
-
0036200070
-
An anthropoid-specific locus of orphan C to U RNA-editing enzymes on chromosome 22
-
Jarmuz A, Chester A, Bayliss J, Gisbourne J, Dunham I, Scott J, Navaratnam N (2002) An anthropoid-specific locus of orphan C to U RNA-editing enzymes on chromosome 22. Genomics 79(3): 285-296.
-
(2002)
Genomics
, vol.79
, Issue.3
, pp. 285-296
-
-
Jarmuz, A.1
Chester, A.2
Bayliss, J.3
Gisbourne, J.4
Dunham, I.5
Scott, J.6
Navaratnam, N.7
-
19
-
-
34247623286
-
Population stratification of a common APOBEC gene deletion polymorphism
-
Kidd JM, Newman TL, Tuz un E, Kaul R, Eichler EE (2007) Population stratification of a common APOBEC gene deletion polymorphism. PLoS Genet 3(4): E63.
-
(2007)
PLoS Genet
, vol.3
, Issue.4
-
-
Kidd, J.M.1
Newman, T.L.2
Tuzun, E.3
Kaul, R.4
Eichler, E.E.5
-
20
-
-
48749116925
-
Identification of novel deletion polymorphisms in breast cancer
-
Komatsu A, Nagasaki K, Fujimori M, Amano J, Miki Y (2008) Identification of novel deletion polymorphisms in breast cancer. Int J Oncol 33(2): 261-270.
-
(2008)
Int J Oncol
, vol.33
, Issue.2
, pp. 261-270
-
-
Komatsu, A.1
Nagasaki, K.2
Fujimori, M.3
Amano, J.4
Miki, Y.5
-
21
-
-
69449103867
-
Defining apobec3 expression patterns in human tissues and hematopoietic cell subsets
-
Koning FA, Newman EN, Kim EY, Kunstman KJ, Wolinsky SM, Malim MH (2009) Defining APOBEC3 expression patterns in human tissues and hematopoietic cell subsets. J Virol 83(18): 9474-9485.
-
(2009)
J Virol
, vol.83
, Issue.18
, pp. 9474-9485
-
-
Koning, F.A.1
Newman, E.N.2
Kim, E.Y.3
Kunstman, K.J.4
Wolinsky, S.M.5
Malim, M.H.6
-
22
-
-
79955530503
-
Apobec3a can activate the dna damage response and cause cell-cycle arrest
-
Landry S, Narvaiza I, Linfesty DC, Weitzman MD (2011) APOBEC3A can activate the DNA damage response and cause cell-cycle arrest. EMBO Rep 12(5): 444-450.
-
(2011)
EMBO Rep
, vol.12
, Issue.5
, pp. 444-450
-
-
Landry, S.1
Narvaiza, I.2
Linfesty, D.C.3
Weitzman, M.D.4
-
23
-
-
0038363470
-
Hypermutation of HIV-1 DNA in the absence of the Vif protein
-
Lecossier D, Bouchonnet F, Clavel F, Hance AJ (2003) Hypermutation of HIV-1 DNA in the absence of the Vif protein. Science 300(5622): 1112.
-
(2003)
Science
, vol.300
, Issue.5622
, pp. 1112
-
-
Lecossier, D.1
Bouchonnet, F.2
Clavel, F.3
Hance, A.J.4
-
24
-
-
0038681023
-
Bro ad antiretroviral defence by human apobec3g through lethal editing of nascent reverse transcripts
-
Mangeat B, Turelli P, Caron G, Friedli M, Perrin L, Trono D (2003) Bro ad antiretroviral defence by human APOBEC3G through lethal editing of nascent reverse transcripts. Nature 424(6944): 99-103.
-
(2003)
Nature
, vol.424
, Issue.6944
, pp. 99-103
-
-
Mangeat, B.1
Turelli, P.2
Caron, G.3
Friedli, M.4
Perrin, L.5
Trono, D.6
-
25
-
-
0038107587
-
Species-specific exclusion of apobec3g from hiv-1 virions by vif
-
Mariani R, Chen D, Schrofelbauer B, Navarro F, Konig R, Bollman B, Mu nk C, Nymark-McMahon H, Landau NR (2003) Species-specific exclusion of APOBEC3G from HIV-1 virions by Vif. Cell 114(1): 21-31.
-
(2003)
Cell
, vol.114
, Issue.1
, pp. 21-31
-
-
Mariani, R.1
Chen, D.2
Schrofelbauer, B.3
Navarro, F.4
Konig, R.5
Bollman, B.6
Munk, C.7
Nymark-Mcmahon, H.8
Landau, N.R.9
-
26
-
-
34147180434
-
Helicobacter pylori infection triggers aberrant expression of activation-induced cytidine deaminase in gastric epithelium
-
Matsumoto Y, Marusawa H, Kinoshita K, Endo Y, Kou T, M orisawa T, Azuma T, Okazaki IM, Honjo T, Chiba T (2007) Helicobacter pylori infection triggers aberrant expression of activation-induced cytidine deaminase in gastric epithelium. Nat Med 13(4): 470-476.
-
(2007)
Nat Med
, vol.13
, Issue.4
, pp. 470-476
-
-
Matsumoto, Y.1
Marusawa, H.2
Kinoshita, K.3
Endo, Y.4
Kou, T.5
Morisawa, T.6
Azuma, T.7
Okazaki, I.M.8
Honjo, T.9
Chiba, T.10
-
28
-
-
0032525836
-
Activation of the beta-catenin gene in primary hepatocellular carcinomas by somatic alterations involving exon 3
-
Miyoshi Y, Iwao K, Nagasawa Y, Aihara T, Sasaki Y, Imaoka S, Murata M, Shimano T, Nakamura Y (1998) Activation of the beta-catenin gene in primary hepatocellular carcinomas by somatic alterations involving exon 3. Cancer Res 58(12): 2524-2527.
-
(1998)
Cancer Res
, vol.58
, Issue.12
, pp. 2524-2527
-
-
Miyoshi, Y.1
Iwao, K.2
Nagasawa, Y.3
Aihara, T.4
Sasaki, Y.5
Imaoka, S.6
Murata, M.7
Shimano, T.8
Nakamura, Y.9
-
29
-
-
57349179128
-
Organ-specific profiles of genetic changes in cancers caused by activation-induced cytidine deaminase expression
-
Morisawa T , Marusawa H, Ueda Y, Iwai A, Okazaki IM, Honjo T, Chiba T (2008) Organ-specific profiles of genetic changes in cancers caused by activation-induced cytidine deaminase expression. Int J Cancer 123(12): 2735-2740.
-
(2008)
Int J Cancer
, vol.123
, Issue.12
, pp. 2735-2740
-
-
Morisawa, T.1
Marusawa, H.2
Ueda, Y.3
Iwai, A.4
Okazaki, I.M.5
Honjo, T.6
Chiba, T.7
-
30
-
-
84882593001
-
Human apobec3a isoforms translocate to the nucleus and induce dna double strand breaks leading to cell stress and death
-
Mussil B, Suspene R, Aynaud MM, Gauvrit A, Vartanian JP, Wain-Hobson S (2013) Human APOBEC3A isoforms translocate to the nucleus and induce DNA double strand breaks leading to cell stress and death. PLoS One 8(8): E73641.
-
(2013)
PLoS One
, vol.8
, Issue.8
-
-
Mussil, B.1
Suspene, R.2
Aynaud, M.M.3
Gauvrit, A.4
Vartanian, J.P.5
Wain-Hobson, S.6
-
31
-
-
84861541343
-
Mutational processes molding the genomes of 21 breast cancers
-
Nik-Zainal S Alexandrov LB Wedge DC Van Loo P Greenman CD Raine K Jones D Hinton J Marshall J Stebbings La Menzies A Martin S Leung K Chen L Leroy C Ramakrishna M Rance R Lau KW Mudie LJ Varela I McBride DJ Bignell GR Cooke SL Shlien A Gamble J Whitmore I Maddison M Tarpey PS Davies HR Papaemmanuil E Stephens PJ McLaren S Butler AP Teague JW Jonsson G Garber JE Silver D Miron P Fatima A Boyault S Langerod A Tutt A Martens JW Aparicio SA Borg A Salomon AV Thomas G Borresen-Dale AL Richardson AL Neuberger MS Futreal PA Campbell PJ Stratton MR 2012 Mutational processes molding the genomes of 21 breast cancers Cell 149 5 979-993.
-
(2012)
Cell
, vol.149
, Issue.5
, pp. 979-993
-
-
Nik-Zainal, S.1
Alexandrov, L.B.2
Wedge, D.C.3
Van Loo, P.4
Greenman, C.D.5
Raine, K.6
Jones, D.7
Hinton, J.8
Marshall, J.9
Stebbings, L.A.10
Menzies, A.11
Martin, S.12
Leung, K.13
Chen, L.14
Leroy, C.15
Ramakrishna, M.16
Rance, R.17
Lau, K.W.18
Mudie, L.J.19
Varela, I.20
McBride, D.J.21
Bignell, G.R.22
Cooke, S.L.23
Shlien, A.24
Gamble, J.25
Whitmore, I.26
Maddison, M.27
Tarpey, P.S.28
Davies, H.R.29
Papaemmanuil, E.30
Stephens, P.J.31
McLaren, S.32
Butler, A.P.33
Teague, J.W.34
Jonsson, G.35
Garber, J.E.36
Silver, D.37
Miron, P.38
Fatima, A.39
Boyault, S.40
Langerod, A.41
Tutt, A.42
Martens, J.W.43
Aparicio, S.A.44
Borg, A.45
Salomon, A.V.46
Thomas, G.47
Borresen-Dale, A.L.48
Richardson, A.L.49
Neuberger, M.S.50
Futreal, P.A.51
Campbell, P.J.52
Stratton, M.R.53
more..
-
32
-
-
74449093973
-
A comprehensive catalogue of somatic mutations from a human cancer genome
-
Pleasance ED, Cheetham RK, Stephens PJ, McBride DJ, Humphray SJ, Greenman CD, Varela I, Lin ML, Ordonez GR, Bignell GR, Ye K, Alipaz J, Bauer MJ, Beare D, Butler A, Carter RJ, Chen L, Cox AJ, Edkins S, Kokko-Gonzales PI, Gormley NA, Grocock RJ, Haudenschild CD, Hims MM, James T, Jia M, Kingsbury Z, Leroy C, Marshall J, Menzies A, Mudie LJ, Ning Z, Royce T, Schulz-Trie g laff OB, Spiridou A, Stebbings LA, Szajkowski L, Teague J, Williamson D, Chin L, Ross MT, Campbell PJ, Bentley DR, Futreal PA, Stratton MR (2010) A comprehensive catalogue of somatic mutations from a human cancer genome. Nature 463(7278): 191-196.
-
(2010)
Nature
, vol.463
, Issue.7278
, pp. 191-196
-
-
Pleasance, E.D.1
Cheetham, R.K.2
Stephens, P.J.3
McBride, D.J.4
Humphray, S.J.5
Greenman, C.D.6
Varela, I.7
Lin, M.L.8
Ordonez, G.R.9
Bignell, G.R.10
Ye, K.11
Alipaz, J.12
Bauer, M.J.13
Beare, D.14
Butler, A.15
Carter, R.J.16
Chen, L.17
Cox, A.J.18
Edkins, S.19
Kokko-Gonzales, P.I.20
Gormley, N.A.21
Grocock, R.J.22
Haudenschild, C.D.23
Hims, M.M.24
James, T.25
Jia, M.26
Kingsbury, Z.27
Leroy, C.28
Marshall, J.29
Menzies, A.30
Mudie, L.J.31
Ning, Z.32
Royce, T.33
Schulz-Trieglaff, O.B.34
Spiridou, A.35
Stebbings, L.A.36
Szajkowski, L.37
Teague, J.38
Williamson, D.39
Chin, L.40
Ross, M.T.41
Campbell, P.J.42
Bentley, D.R.43
Futreal, P.A.44
Stratton, M.R.45
more..
-
33
-
-
77955004656
-
Quantitative profiling of the full apobec3 mrna repertoire in lymphocytes and tissues: Implications for hiv-1 restriction
-
Refsland EW, Stenglein MD, Shindo K, Albin JS, Brown WL, Harris RS (2010) Quantitative profiling of the full APOBEC3 mRNA repertoire in lymphocytes and tissues: Implications for HIV-1 restriction. Nucleic Acids Res 38(13): 4274-4284.
-
(2010)
Nucleic Acids Res
, vol.38
, Issue.13
, pp. 4274-4284
-
-
Refsland, E.W.1
Stenglein, M.D.2
Shindo, K.3
Albin, J.S.4
Brown, W.L.5
Harris, R.S.6
-
34
-
-
0037043699
-
Isolation of a human gene that inhibits hiv-1 infection and is suppr essed by the viral vif protein
-
Sheehy AM, Gaddis NC, Choi JD, Malim MH (2002) Isolation of a human gene that inhibits HIV-1 infection and is suppr essed by the viral Vif protein. Nature 418(6898): 646-650.
-
(2002)
Nature
, vol.418
, Issue.6898
, pp. 646-650
-
-
Sheehy, A.M.1
Gaddis, N.C.2
Choi, J.D.3
Malim, M.H.4
-
35
-
-
84869159477
-
Apobec3b can impair genomic stability by inducing base substitutions in genomic dna in human cells
-
Shinohara M, Io K, Shindo K, Matsui M, Sakamoto T, Tada K, Kobayashi M, Kadowaki N, Takaori-Kondo A (2012) APOBEC3B can impair genomic stability by inducing base substitutions in genomic DNA in human cells. Sci Rep 2: 806.
-
(2012)
Sci Rep
, vol.2
, pp. 806
-
-
Shinohara, M.1
Io, K.2
Shindo, K.3
Matsui, M.4
Sakamoto, T.5
Tada, K.6
Kobayashi, M.7
Kadowaki, N.8
Takaori-Kondo, A.9
-
36
-
-
76349094670
-
Apobec3 proteins mediate the clearance of foreign dna from human cells
-
Stenglein MD, Burns MB, Li M, Lengyel J, Harris RS (2010) APOBEC3 proteins mediate the clearance of foreign DNA from human cells. Nat Struct Mol Biol 17(2): 222-229.
-
(2010)
Nat Struct Mol Biol
, vol.17
, Issue.2
, pp. 222-229
-
-
Stenglein, M.D.1
Burns, M.B.2
Li, M.3
Lengyel, J.4
Harris, R.S.5
-
37
-
-
72949119310
-
Complex landscapes of somatic rearrangement in human breast cancer genomes
-
Stephens PJ, McBride DJ, Lin ML, Varela I, Pleasance ED, Simpson JT, Stebbings LA, Leroy C, Edkins S, Mudie LJ, Greenman CD, Jia M, Latimer C, Teague JW, Lau KW, Burton J, Quail MA, Swerdlow H, Churcher C, Natrajan R, Sieuwerts AM, Martens JW, Silver DP, Langerod A, Russnes HE, Foekens JA, Reis-Filho JS, Van ?t Veer L, Richardson AL, Borresen-Dale AL, Campbell PJ, Futreal PA, Stratton MR (2009) Complex landscapes of somatic rearrangement in human breast cancer genomes. Nature 462(7276): 1005-1010.
-
(2009)
Nature
, vol.462
, Issue.7276
, pp. 1005-1010
-
-
Stephens, P.J.1
McBride, D.J.2
Lin, M.L.3
Varela, I.4
Pleasance, E.D.5
Simpson, J.T.6
Stebbings, L.A.7
Leroy, C.8
Edkins, S.9
Mudie, L.J.10
Greenman, C.D.11
Jia, M.12
Latimer, C.13
Teague, J.W.14
Lau, K.W.15
Burton, J.16
Quail, M.A.17
Swerdlow, H.18
Churcher, C.19
Natrajan, R.20
Sieuwerts, A.M.21
Martens, J.W.22
Silver, D.P.23
Langerod, A.24
Russnes, H.E.25
Foekens, J.A.26
Reis-Filho, J.S.27
Vant Veer, L.28
Richardson, A.L.29
Borresen-Dale, A.L.30
Campbell, P.J.31
Futreal, P.A.32
Stratton, M.R.33
more..
-
38
-
-
84861576201
-
The landscape of cancer genes and mutational processes in breast cancer
-
Stephens PJ, Tarpey PS, Davies H, Van Loo P, Greenman C, Wedge DC, Nik-Zain al S, Martin S, Varela I, Bignell GR, Yates LR, Papaemmanuil E, Beare D, Butler A, Cheverton A, Gamble J, Hinton J, Jia M, Jayakumar A, Jones D, Latimer C, Lau KW, McLaren S, McBride DJ, Menzies A, Mudie L, Raine K, Rad R, Chapman MS, Teague J, Easton D, Langerod A, Lee MT, Shen CY, Tee BT, Huimin BW, Broeks A, Vargas AC, Turashvili G, Martens J, Fatima A, Miron P, Chin SF, Thomas G, Boyault S, Mariani O, Lakhani SR, Van De Vijver M, Van ?t Veer L, Foekens J, Desmedt C, Sotiriou C, Tutt A, Caldas C, Reis-Filho JS, Aparicio SA, Salomon AV, Borresen-Dale AL, Richardson AL, Campbell PJ, Futreal PA, Stratton MR (2012) The landscape of cancer genes and mutational processes in breast cancer. Nature 486(7403): 400-404.
-
(2012)
Nature
, vol.486
, Issue.7403
, pp. 400-404
-
-
Stephens, P.J.1
Tarpey, P.S.2
Davies, H.3
Van Loo, P.4
Greenman, C.5
Wedge, D.C.6
Nik-Zainal, S.7
Martin, S.8
Varela, I.9
Bignell, G.R.10
Yates, L.R.11
Papaemmanuil, E.12
Beare, D.13
Butler, A.14
Cheverton, A.15
Gamble, J.16
Hinton, J.17
Jia, M.18
Jayakumar, A.19
Jones, D.20
Latimer, C.21
Lau, K.W.22
McLaren, S.23
McBride, D.J.24
Menzies, A.25
Mudie, L.26
Raine, K.27
Rad, R.28
Chapman, M.S.29
Teague, J.30
Easton, D.31
Langerod, A.32
Lee, M.T.33
Shen, C.Y.34
Tee, B.T.35
Huimin, B.W.36
Broeks, A.37
Vargas, A.C.38
Turashvili, G.39
Martens, J.40
Fatima, A.41
Miron, P.42
Chin, S.F.43
Thomas, G.44
Boyault, S.45
Mariani, O.46
Lakhani, S.R.47
Van De Vijver, M.48
Vant Veer, L.49
Foekens, J.50
Desmedt, C.51
Sotiriou, C.52
Tutt, A.53
Caldas, C.54
Reis-Filho, J.S.55
Aparicio, S.A.56
Salomon, A.V.57
Borresen-Dale, A.L.58
Richardson, A.L.59
Campbell, P.J.60
Futreal, P.A.61
Stratton, M.R.62
more..
-
39
-
-
79953194132
-
Somatic hypermutation of human mitochondrial and nuclear dna by apobec3 cytidine deaminases, a pathway for DNA catabolism
-
Suspène R, Aynaud M, Gué tard D, Henry M, Eckhoff G, Marchio A, Pineau P, Dejean A, Vartanian JP, Wain-Hobson S (2011a) Somatic hypermutation of human mitochondrial and nuclear DNA by APOBEC3 cytidine deaminases, a pathway for DNA catabolism. Proc Natl Acad Sci USA 108(12): 4858-4863.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, Issue.12
, pp. 4858-4863
-
-
Suspène, R.1
Aynaud, M.2
Guétard, D.3
Henry, M.4
Eckhoff, G.5
Marchio, A.6
Pineau, P.7
Dejean, A.8
Vartanian, J.P.9
Wain-Hobson, S.10
-
40
-
-
79960413190
-
Genetic editing of herpes simplex virus 1 and epstein-barr herpesvirus genomes by human apobec3 cytidine deaminases in culture and in vivo
-
Suspène R, Aynaud MM, K och S, Pasdeloup D, Labetoulle M, Gaertner B, Vartanian JP, Meyerhans A, Wain-Hobson S (2011b) Genetic editing of herpes simplex virus 1 and Epstein-Barr herpesvirus genomes by human APOBEC3 cytidine deaminases in culture and in vivo. J Virol 85 (15): 7594-7602.
-
(2011)
J Virol
, vol.85
, Issue.15
, pp. 7594-7602
-
-
Suspène, R.1
Aynaud, M.M.2
Koch, S.3
Pasdeloup, D.4
Labetoulle, M.5
Gaertner, B.6
Vartanian, J.P.7
Meyerhans, A.8
Wain-Hobson, S.9
-
41
-
-
84879255759
-
Efficient deamination of 5-methylcytidine and 5-substituted deoxycytidine residues in dna by human apobec3a cytidine deaminase
-
Suspène R, Aynaud MM, Vartanian JP, Wain-Hobson S (2013) Efficient deamination of 5-methylcytidine and 5-substituted deoxycytidine residues in DNA by human APOBEC3A cytidine deaminase. PLoS One 8(8): E73641.
-
(2013)
PLoS One
, vol.8
, Issue.8
-
-
Suspène, R.1
Aynaud, M.M.2
Vartanian, J.P.3
Wain-Hobson, S.4
-
42
-
-
20444416733
-
Extensive editing of both hepatitis b virus dna strands by apobec3 cytidine deaminases in vitro and in vivo
-
Suspène R, Gué tard D, Henry M, Sommer P, Wain-Hobson S, Vartanian JP (2005b) Extensive editing of both hepatitis B virus DNA strands by APOBEC3 cytidine deaminases in vitro and in vivo. Proc Natl Acad Sci USA 102(23): 8321-8326.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, Issue.23
, pp. 8321-8326
-
-
Suspène, R.1
Guétard, D.2
Henry, M.3
Sommer, P.4
Wain-Hobson, S.5
Vartanian, J.P.6
-
43
-
-
11444249832
-
Recovery of apobec3-edited human immunodeficiency virus g-4a hypermutants by differential dna denaturation pcr
-
Suspène R, Henry M, Guillot S, Wain-Hobson S, Vartanian JP (2005 a ) Recovery of APOBEC3-edited human immunodeficiency virus G-4A hypermutants by differential DNA denaturation PCR. J Gen Virol 86(Part 1): 125-129.
-
(2005)
J Gen Virol
, vol.86
, Issue.PART 1
, pp. 125-129
-
-
Suspène, R.1
Henry, M.2
Guillot, S.3
Wain-Hobson, S.4
Vartanian, J.P.5
-
44
-
-
2342469410
-
Apobec3g is a single-stranded dna cytidine deaminase and functions independently of hiv reverse transcriptase
-
Suspène R, Sommer P, Henry M, Ferris S, Guétard D, Pochet S, Chester A, Navaratnam N, Wain-Hobson S, Vartanian JP (2004) APOBEC3G is a single-stranded DNA cytidine deaminase and functions independently of HIV reverse transcriptase. Nucleic Acids Res 32(8): 2421-2429.
-
(2004)
Nucleic Acids Res
, vol.32
, Issue.8
, pp. 2421-2429
-
-
Suspène, R.1
Sommer, P.2
Henry, M.3
Ferris, S.4
Guétard, D.5
Pochet, S.6
Chester, A.7
Navaratnam, N.8
Wain-Hobson, S.9
Vartanian, J.P.10
-
45
-
-
42049096136
-
Evidence for editing of human papillomavirus dna by apobec3 in benign and precancerous lesions
-
Vartanian JP, Gué tard D, Henry M, Wain-Hobson S (2008) Evidence for editing of human papillomavirus DNA by APOBEC3 in benign and precancerous lesions. Science 320(5873): 230-233.
-
(2008)
Science
, vol.320
, Issue.5873
, pp. 230-233
-
-
Vartanian, J.P.1
Guétard, D.2
Henry, M.3
Wain-Hobson, S.4
-
46
-
-
77954074544
-
Massive apobec3 editing of hepatitis b viral dna in cirrhosis
-
Vartanian JP, Henry M, Marchio A, Suspène R, Aynaud MM, Guétard D, Cervantes-Gonzalez M, Battiston C, Mazzaferro V, Pineau P, Dejean A, Wain-Hobson S (2010) Massive APOBEC3 editing of hepatitis B viral DNA in cirrhosis. PLoS Pathogen 6(5): E1000928.
-
(2010)
PLoS Pathogen
, vol.6
, Issue.5
-
-
Vartanian, J.P.1
Henry, M.2
Marchio, A.3
Suspène, R.4
Aynaud, M.M.5
Guétard, D.6
Cervantes-Gonzalez, M.7
Battiston, C.8
Mazzaferro, V.9
Pineau, P.10
Dejean, A.11
Wain-Hobson, S.12
-
47
-
-
0023972380
-
Uracil-dna glycosylase inhibitor of bacteriophage pbs2: Cloning and effects of expression of the inhibitor gene in Escherichia coli
-
Wang Z, Mosbaugh DW (1988) Uracil-DNA glycosylase inhibitor of bacteriophage PBS2: Cloning and effects of expression of the inhibitor gene in Escherichia coli. J Bacteriol 170(3): 1082-1091.
-
(1988)
J Bacteriol
, vol.170
, Issue.3
, pp. 1082-1091
-
-
Wang, Z.1
Mosbaugh, D.W.2
-
48
-
-
84867270112
-
Efficient deamination of 5-methylcytosines in dna by human apobec3a, but not by aid or apobec3g
-
Wijesinghe P, Bhagwat AS (2012) Efficient deamination of 5-methylcytosines in DNA by human APOBEC3A, but not by AID or APOBEC3G. Nucleic Acids Res 40(18): 9206-9217.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.18
, pp. 9206-9217
-
-
Wijesinghe, P.1
Bhagwat, A.S.2
-
49
-
-
84874521034
-
Evidence of associations of apobec3b gene deletion with su sceptibility to persistent hbv infection and hepatocellular carcinoma
-
Zhang T, Cai J, Chang J, Yu D, Wu C, Yan T, Zhai K, Bi X, Zhao H, Xu J, Tan W, Qu C, Lin D (2012) Evidence of associations of APOBEC3B gene deletion with su sceptibility to persistent HBV infection and hepatocellular carcinoma. Hum Mol Genet 22(6): 1262-1269.
-
(2012)
Hum Mol Genet
, vol.22
, Issue.6
, pp. 1262-1269
-
-
Zhang, T.1
Cai, J.2
Chang, J.3
Yu, D.4
Wu, C.5
Yan, T.6
Zhai, K.7
Bi, X.8
Zhao, H.9
Xu, J.10
Tan, W.11
Qu, C.12
Lin, D.13
|