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Volumn 25, Issue 1, 2014, Pages 126-130

Imaging RNA Polymerase II transcription sites in living cells

Author keywords

[No Author keywords available]

Indexed keywords

DNA TOPOISOMERASE; RNA POLYMERASE II; RNA; TRANSCRIPTION FACTOR;

EID: 84899873434     PISSN: 0959437X     EISSN: 18790380     Source Type: Journal    
DOI: 10.1016/j.gde.2014.01.002     Document Type: Review
Times cited : (35)

References (35)
  • 1
    • 70249104647 scopus 로고    scopus 로고
    • Defining mechanisms that regulate RNA polymerase II transcription in vivo
    • Fuda N.J., Ardehali M.B., Lis J.T. Defining mechanisms that regulate RNA polymerase II transcription in vivo. Nature 2009, 461:186-192.
    • (2009) Nature , vol.461 , pp. 186-192
    • Fuda, N.J.1    Ardehali, M.B.2    Lis, J.T.3
  • 2
    • 0027499230 scopus 로고
    • Visualization of focal sites of transcription within human nuclei
    • Jackson D.A., Hassan A.B., Errington R.J., Cook P.R. Visualization of focal sites of transcription within human nuclei. EMBO J 1993, 12:1059-1065.
    • (1993) EMBO J , vol.12 , pp. 1059-1065
    • Jackson, D.A.1    Hassan, A.B.2    Errington, R.J.3    Cook, P.R.4
  • 3
    • 0027305616 scopus 로고
    • Fluorescent labeling of nascent RNA reveals transcription by RNA Polymerase II in domains scattered throughout the nucleus
    • Wansink D.G., Schul W., van der Kraan I., van Steensel B., van Driel R., de Jong L. Fluorescent labeling of nascent RNA reveals transcription by RNA Polymerase II in domains scattered throughout the nucleus. J Cell Biol 1993, 122:283-293.
    • (1993) J Cell Biol , vol.122 , pp. 283-293
    • Wansink, D.G.1    Schul, W.2    van der Kraan, I.3    van Steensel, B.4    van Driel, R.5    de Jong, L.6
  • 4
    • 0029973080 scopus 로고    scopus 로고
    • Active RNA polymerases are localized within discrete transcription "factories' in human nuclei
    • Iborra F.J., Pombo A., Jackson D.A., Cook P.R. Active RNA polymerases are localized within discrete transcription "factories' in human nuclei. J Cell Sci 1996, 109(Pt 6):1427-1436.
    • (1996) J Cell Sci , vol.109 , Issue.PART 6 , pp. 1427-1436
    • Iborra, F.J.1    Pombo, A.2    Jackson, D.A.3    Cook, P.R.4
  • 7
    • 67650064596 scopus 로고    scopus 로고
    • Lack of bystander activation shows that localization exterior to chromosome territories is not sufficient to up-regulate gene expression
    • Morey C., Kress C., Bickmore W.A. Lack of bystander activation shows that localization exterior to chromosome territories is not sufficient to up-regulate gene expression. Genome Res 2009, 19:1184-1194.
    • (2009) Genome Res , vol.19 , pp. 1184-1194
    • Morey, C.1    Kress, C.2    Bickmore, W.A.3
  • 8
    • 18744404520 scopus 로고    scopus 로고
    • Different populations of RNA Polymerase II in living mammalian cells
    • Hieda M., Winstanley H., Maini P., Iborra F.J., Cook P.R. Different populations of RNA Polymerase II in living mammalian cells. Chromosome Res 2005, 13:135-144.
    • (2005) Chromosome Res , vol.13 , pp. 135-144
    • Hieda, M.1    Winstanley, H.2    Maini, P.3    Iborra, F.J.4    Cook, P.R.5
  • 9
    • 0033841301 scopus 로고    scopus 로고
    • Mammalian cell lines expressing functional RNA Polymerase II tagged with the green fluorescent protein
    • Sugaya K., Vigneron M., Cook P.R. Mammalian cell lines expressing functional RNA Polymerase II tagged with the green fluorescent protein. J Cell Sci 2000, 113(Pt 15):2679-2683.
    • (2000) J Cell Sci , vol.113 , Issue.PART 15 , pp. 2679-2683
    • Sugaya, K.1    Vigneron, M.2    Cook, P.R.3
  • 10
    • 0037049641 scopus 로고    scopus 로고
    • The transcription cycle of RNA Polymerase II in living cells
    • Kimura H., Sugaya K., Cook P.R. The transcription cycle of RNA Polymerase II in living cells. J Cell Biol 2002, 159:777-782.
    • (2002) J Cell Biol , vol.159 , pp. 777-782
    • Kimura, H.1    Sugaya, K.2    Cook, P.R.3
  • 13
    • 33845360042 scopus 로고    scopus 로고
    • Ultra-high resolution imaging by fluorescence photoactivation localization microscopy
    • Hess S.T., Girirajan T.P., Mason M.D. Ultra-high resolution imaging by fluorescence photoactivation localization microscopy. Biophys J 2006, 91:4258-4272.
    • (2006) Biophys J , vol.91 , pp. 4258-4272
    • Hess, S.T.1    Girirajan, T.P.2    Mason, M.D.3
  • 16
    • 38149133051 scopus 로고    scopus 로고
    • Transcription factories are nuclear subcompartments that remain in the absence of transcription
    • Mitchell J.A., Fraser P. Transcription factories are nuclear subcompartments that remain in the absence of transcription. Genes Dev 2008, 22:20-25.
    • (2008) Genes Dev , vol.22 , pp. 20-25
    • Mitchell, J.A.1    Fraser, P.2
  • 17
    • 38549115170 scopus 로고    scopus 로고
    • P-TEFb is critical for the maturation of RNA Polymerase II into productive elongation in vivo
    • Ni Z., Saunders A., Fuda N.J., Yao J., Suarez J.R., Webb W.W., Lis J.T. P-TEFb is critical for the maturation of RNA Polymerase II into productive elongation in vivo. Mol Cell Biol 2008, 28:1161-1170.
    • (2008) Mol Cell Biol , vol.28 , pp. 1161-1170
    • Ni, Z.1    Saunders, A.2    Fuda, N.J.3    Yao, J.4    Suarez, J.R.5    Webb, W.W.6    Lis, J.T.7
  • 19
    • 33744779614 scopus 로고    scopus 로고
    • The locus control region is required for association of the murine beta-globin locus with engaged transcription factories during erythroid maturation
    • Ragoczy T., Bender M.A., Telling A., Byron R., Groudine M. The locus control region is required for association of the murine beta-globin locus with engaged transcription factories during erythroid maturation. Genes Dev 2006, 20:1447-1457.
    • (2006) Genes Dev , vol.20 , pp. 1447-1457
    • Ragoczy, T.1    Bender, M.A.2    Telling, A.3    Byron, R.4    Groudine, M.5
  • 20
    • 33745436025 scopus 로고    scopus 로고
    • Active chromatin hub of the mouse alpha-globin locus forms in a transcription factory of clustered housekeeping genes
    • Zhou G.L., Xin L., Song W., Di L.J., Liu G., Wu X.S., Liu D.P., Liang C.C. Active chromatin hub of the mouse alpha-globin locus forms in a transcription factory of clustered housekeeping genes. Mol Cell Biol 2006, 26:5096-5105.
    • (2006) Mol Cell Biol , vol.26 , pp. 5096-5105
    • Zhou, G.L.1    Xin, L.2    Song, W.3    Di, L.J.4    Liu, G.5    Wu, X.S.6    Liu, D.P.7    Liang, C.C.8
  • 24
    • 33748304273 scopus 로고    scopus 로고
    • Dynamics of heat shock factor association with native gene loci in living cells
    • Yao J., Munson K.M., Webb W.W., Lis J.T. Dynamics of heat shock factor association with native gene loci in living cells. Nature 2006, 442:1050-1053.
    • (2006) Nature , vol.442 , pp. 1050-1053
    • Yao, J.1    Munson, K.M.2    Webb, W.W.3    Lis, J.T.4
  • 25
    • 37349099448 scopus 로고    scopus 로고
    • Intranuclear distribution and local dynamics of RNA Polymerase II during transcription activation
    • Yao J., Ardehali M.B., Fecko C.J., Webb W.W., Lis J.T. Intranuclear distribution and local dynamics of RNA Polymerase II during transcription activation. Mol Cell 2007, 28:978-990.
    • (2007) Mol Cell , vol.28 , pp. 978-990
    • Yao, J.1    Ardehali, M.B.2    Fecko, C.J.3    Webb, W.W.4    Lis, J.T.5
  • 26
    • 78650250161 scopus 로고    scopus 로고
    • Recruitment timing and dynamics of transcription factors at the Hsp70 loci in living cells
    • Zobeck K.L., Buckley M.S., Zipfel W.R., Lis J.T. Recruitment timing and dynamics of transcription factors at the Hsp70 loci in living cells. Mol Cell 2010, 40:965-975.
    • (2010) Mol Cell , vol.40 , pp. 965-975
    • Zobeck, K.L.1    Buckley, M.S.2    Zipfel, W.R.3    Lis, J.T.4
  • 28
    • 84862908850 scopus 로고    scopus 로고
    • Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation
    • Li G., Ruan X., Auerbach R.K., Sandhu K.S., Zheng M., Wang P., Poh H.M., Goh Y., Lim J., Zhang J., et al. Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation. Cell 2012, 148:84-98.
    • (2012) Cell , vol.148 , pp. 84-98
    • Li, G.1    Ruan, X.2    Auerbach, R.K.3    Sandhu, K.S.4    Zheng, M.5    Wang, P.6    Poh, H.M.7    Goh, Y.8    Lim, J.9    Zhang, J.10
  • 30
    • 0033561153 scopus 로고    scopus 로고
    • Regional specialization in human nuclei: visualization of discrete sites of transcription by RNA Polymerase III
    • Pombo A., Jackson D.A., Hollinshead M., Wang Z., Roeder R.G., Cook P.R. Regional specialization in human nuclei: visualization of discrete sites of transcription by RNA Polymerase III. EMBO J 1999, 18:2241-2253.
    • (1999) EMBO J , vol.18 , pp. 2241-2253
    • Pombo, A.1    Jackson, D.A.2    Hollinshead, M.3    Wang, Z.4    Roeder, R.G.5    Cook, P.R.6
  • 31
    • 57849109058 scopus 로고    scopus 로고
    • Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters
    • Core L.J., Waterfall J.J., Lis J.T. Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters. Science 2008, 322:1845-1848.
    • (2008) Science , vol.322 , pp. 1845-1848
    • Core, L.J.1    Waterfall, J.J.2    Lis, J.T.3
  • 32
    • 84875190221 scopus 로고    scopus 로고
    • Genome architecture: domain organization of interphase chromosomes
    • Bickmore W.A., van Steensel B. Genome architecture: domain organization of interphase chromosomes. Cell 2013, 152:1270-1284.
    • (2013) Cell , vol.152 , pp. 1270-1284
    • Bickmore, W.A.1    van Steensel, B.2
  • 33
    • 67650319009 scopus 로고    scopus 로고
    • Single-molecule approaches to stochastic gene expression
    • Raj A., van Oudenaarden A. Single-molecule approaches to stochastic gene expression. Annu Rev Biophys 2009, 38:255-270.
    • (2009) Annu Rev Biophys , vol.38 , pp. 255-270
    • Raj, A.1    van Oudenaarden, A.2
  • 34
    • 80053343092 scopus 로고    scopus 로고
    • TAL effectors: customizable proteins for DNA targeting
    • Bogdanove A.J., Voytas D.F. TAL effectors: customizable proteins for DNA targeting. Science 2011, 333:1843-1846.
    • (2011) Science , vol.333 , pp. 1843-1846
    • Bogdanove, A.J.1    Voytas, D.F.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.