-
1
-
-
79251577061
-
The regulation of autophagy - Unanswered questions
-
PMID:21187343
-
Chen Y, Klionsky DJ. The regulation of autophagy - unanswered questions. J Cell Sci 2011; 124:161-70; PMID:21187343; http://dx.doi.org/10.1242/jcs.064576
-
(2011)
J Cell Sci
, vol.124
, pp. 161-170
-
-
Chen, Y.1
Klionsky, D.J.2
-
2
-
-
34447099450
-
Atg8, a ubiquitin-like protein required for autophagosome formation, mediates membrane tethering and hemifusion
-
PMID:17632063
-
Nakatogawa H, Ichimura Y, Ohsumi Y. Atg8, a ubiquitin-like protein required for autophagosome formation, mediates membrane tethering and hemifusion. Cell 2007; 130:165-78; PMID:17632063; http://dx.doi.org/10.1016/j. cell.2007.05.021
-
(2007)
Cell
, vol.130
, pp. 165-178
-
-
Nakatogawa, H.1
Ichimura, Y.2
Ohsumi, Y.3
-
3
-
-
47549092694
-
Atg8 controls phagophore expansion during autophagosome formation
-
PMID:18508918
-
Xie Z, Nair U, Klionsky DJ. Atg8 controls phagophore expansion during autophagosome formation. Mol Biol Cell 2008; 19:3290-8; PMID:18508918; http://dx.doi.org/10.1091/mbc.E07-12-1292
-
(2008)
Mol Biol Cell
, vol.19
, pp. 3290-3298
-
-
Xie, Z.1
Nair, U.2
Klionsky, D.J.3
-
4
-
-
0036901104
-
Mechanism of cargo selection in the cytoplasm to vacuole targeting pathway
-
PMID:12479808
-
Shintani T, Huang W-P, Stromhaug PE, Klionsky DJ. Mechanism of cargo selection in the cytoplasm to vacuole targeting pathway. Dev Cell 2002; 3:825-37; PMID:12479808; http://dx.doi.org/10.1016/S1534-5807(02)00373-8
-
(2002)
Dev Cell
, vol.3
, pp. 825-837
-
-
Shintani, T.1
Huang, W.-P.2
Stromhaug, P.E.3
Klionsky, D.J.4
-
5
-
-
27944504351
-
p62/SQSTM1 forms protein aggregates degraded by autophagy and has a protective effect on hunting-tin-induced cell death
-
PMID:16286508
-
Bjørkøy G, Lamark T, Brech A, Outzen H, Perander M, Overvatn A, Stenmark H, Johansen T. p62/SQSTM1 forms protein aggregates degraded by autophagy and has a protective effect on hunting-tin-induced cell death. J Cell Biol 2005; 171:603-14; PMID:16286508; http://dx.doi.org/10.1083/jcb. 200507002
-
(2005)
J Cell Biol
, vol.171
, pp. 603-614
-
-
Bjørkøy, G.1
Lamark, T.2
Brech, A.3
Outzen, H.4
Perander, M.5
Overvatn, A.6
Stenmark, H.7
Johansen, T.8
-
6
-
-
57249083972
-
Structural basis of target recognition by Atg8/LC3 during selective autophagy
-
PMID:19021777
-
Noda NN, Kumeta H, Nakatogawa H, Satoo K, Adachi W, Ishii J, Fujioka Y, Ohsumi Y, Inagaki F. Structural basis of target recognition by Atg8/LC3 during selective autophagy. Genes Cells 2008; 13:1211-8; PMID:19021777; http://dx.doi.org/10.1111/j.1365-2443.2008.01238.x
-
(2008)
Genes Cells
, vol.13
, pp. 1211-1218
-
-
Noda, N.N.1
Kumeta, H.2
Nakatogawa, H.3
Satoo, K.4
Adachi, W.5
Ishii, J.6
Fujioka, Y.7
Ohsumi, Y.8
Inagaki, F.9
-
7
-
-
79954544250
-
LC3 and GATE-16 N termini mediate membrane fusion processes required for autophagosome biogenesis
-
PMID:21497758
-
Weidberg H, Shpilka T, Shvets E, Abada A, Shimron F, Elazar Z. LC3 and GATE-16 N termini mediate membrane fusion processes required for autophagosome biogenesis. Dev Cell 2011; 20:444-54; PMID:21497758; http://dx.doi.org/10.1016/ j.devcel.2011.02.006
-
(2011)
Dev Cell
, vol.20
, pp. 444-454
-
-
Weidberg, H.1
Shpilka, T.2
Shvets, E.3
Abada, A.4
Shimron, F.5
Elazar, Z.6
-
8
-
-
58149290220
-
An Atg4B mutant hampers the lipidation of LC3 paralogues and causes defects in autophagosome closure
-
PMID:18768752
-
Fujita N, Hayashi-Nishino M, Fukumoto H, Omori H, Yamamoto A, Noda T, Yoshimori T. An Atg4B mutant hampers the lipidation of LC3 paralogues and causes defects in autophagosome closure. Mol Biol Cell 2008; 19:4651-9; PMID:18768752; http://dx.doi.org/10.1091/mbc.E08-03-0312
-
(2008)
Mol Biol Cell
, vol.19
, pp. 4651-4659
-
-
Fujita, N.1
Hayashi-Nishino, M.2
Fukumoto, H.3
Omori, H.4
Yamamoto, A.5
Noda, T.6
Yoshimori, T.7
-
9
-
-
77953122645
-
LC3 and GATE-16/GABARAP sub-families are both essential yet act differently in autophagosome biogenesis
-
PMID:20418806
-
Weidberg H, Shvets E, Shpilka T, Shimron F, Shinder V, Elazar Z. LC3 and GATE-16/GABARAP sub-families are both essential yet act differently in autophagosome biogenesis. EMBO J 2010; 29:1792-802; PMID:20418806; http://dx.doi.org/10.1038/emboj.2010.74
-
(2010)
EMBO J
, vol.29
, pp. 1792-1802
-
-
Weidberg, H.1
Shvets, E.2
Shpilka, T.3
Shimron, F.4
Shinder, V.5
Elazar, Z.6
-
10
-
-
79952355107
-
Selective autophagy mediated by autophagic adapter proteins
-
PMID:21189453
-
Johansen T, Lamark T. Selective autophagy mediated by autophagic adapter proteins. Autophagy 2011; 7:279-96; PMID:21189453; http://dx.doi.org/10.4161/ auto.7.3.14487
-
(2011)
Autophagy
, vol.7
, pp. 279-296
-
-
Johansen, T.1
Lamark, T.2
-
11
-
-
84864809503
-
Ubiquitin-like proteins and autophagy at a glance
-
PMID:22736434
-
Shpilka T, Mizushima N, Elazar Z. Ubiquitin-like proteins and autophagy at a glance. J Cell Sci 2012; 125:2343-8; PMID:22736434; http://dx.doi.org/10. 1242/jcs.093757
-
(2012)
J Cell Sci
, vol.125
, pp. 2343-2348
-
-
Shpilka, T.1
Mizushima, N.2
Elazar, Z.3
-
12
-
-
79960878784
-
Atg8: An autophagy-related ubiquitin-like protein family
-
PMID:21867568
-
Shpilka T, Weidberg H, Pietrokovski S, Elazar Z. Atg8: an autophagy-related ubiquitin-like protein family. Genome Biol 2011; 12:226; PMID:21867568; http://dx.doi.org/10.1186/gb-2011-12-7-226
-
(2011)
Genome Biol
, vol.12
, pp. 226
-
-
Shpilka, T.1
Weidberg, H.2
Pietrokovski, S.3
Elazar, Z.4
-
13
-
-
0034707036
-
A ubiquitin-like system mediates protein lipidation
-
PMID:11100732
-
Ichimura Y, Kirisako T, Takao T, Satomi Y, Shimonishi Y, Ishihara N, Mizushima N, Tanida I, Kominami E, Ohsumi M, et al. A ubiquitin-like system mediates protein lipidation. Nature 2000; 408:488-92; PMID:11100732; http://dx.doi.org/10.1038/35044114
-
(2000)
Nature
, vol.408
, pp. 488-492
-
-
Ichimura, Y.1
Kirisako, T.2
Takao, T.3
Satomi, Y.4
Shimonishi, Y.5
Ishihara, N.6
Mizushima, N.7
Tanida, I.8
Kominami, E.9
Ohsumi, M.10
-
14
-
-
0034329418
-
LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing
-
PMID:11060023
-
Kabeya Y, Mizushima N, Ueno T, Yamamoto A, Kirisako T, Noda T, Kominami E, Ohsumi Y, Yoshimori T. LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing. EMBO J 2000; 19:5720-8; PMID:11060023; http://dx.doi.org/10.1093/emboj/19.21.5720
-
(2000)
EMBO J
, vol.19
, pp. 5720-5728
-
-
Kabeya, Y.1
Mizushima, N.2
Ueno, T.3
Yamamoto, A.4
Kirisako, T.5
Noda, T.6
Kominami, E.7
Ohsumi, Y.8
Yoshimori, T.9
-
15
-
-
3242888703
-
LC3, GABARAP and GATE16 localize to autophagosomal membrane depending on form-II formation
-
PMID:15169837
-
Kabeya Y, Mizushima N, Yamamoto A, Oshitani-Okamoto S, Ohsumi Y, Yoshimori T. LC3, GABARAP and GATE16 localize to autophagosomal membrane depending on form-II formation. J Cell Sci 2004; 117:2805-12; PMID:15169837; http://dx.doi.org/10.1242/jcs.01131
-
(2004)
J Cell Sci
, vol.117
, pp. 2805-2812
-
-
Kabeya, Y.1
Mizushima, N.2
Yamamoto, A.3
Oshitani-Okamoto, S.4
Ohsumi, Y.5
Yoshimori, T.6
-
16
-
-
4344604111
-
HsAtg4B/HsApg4B/autophagin-1 cleaves the carboxyl termini of three human Atg8 homologues and delipidates microtu-bule- associated protein light chain 3- and GABAA receptor-associated protein-phospholipid conjugates
-
PMID:15187094
-
Tanida I, Sou YS, Ezaki J, Minematsu-Ikeguchi N, Ueno T, Kominami E. HsAtg4B/HsApg4B/autophagin-1 cleaves the carboxyl termini of three human Atg8 homologues and delipidates microtu-bule- associated protein light chain 3- and GABAA receptor-associated protein-phospholipid conjugates. J Biol Chem 2004; 279:36268-76; PMID:15187094; http://dx.doi.org/10.1074/jbc.M401461200
-
(2004)
J Biol Chem
, vol.279
, pp. 36268-36276
-
-
Tanida, I.1
Sou, Y.S.2
Ezaki, J.3
Minematsu-Ikeguchi, N.4
Ueno, T.5
Kominami, E.6
-
17
-
-
60849099049
-
A role for NBR1 in autophagosomal degradation of ubiquitinated substrates
-
PMID:19250911
-
Kirkin V, Lamark T, Sou Y-S, Bjørkøy G, Nunn JL, Bruun J-A, Shvets E, McEwan DG, Clausen TH, Wild P, et al. A role for NBR1 in autophagosomal degradation of ubiquitinated substrates. Mol Cell 2009; 33:505-16; PMID:19250911; http://dx.doi.org/10.1016/j.molcel.2009.01.020
-
(2009)
Mol Cell
, vol.33
, pp. 505-516
-
-
Kirkin, V.1
Lamark, T.2
Sou, Y.-S.3
Bjørkøy, G.4
Nunn, J.L.5
Bruun, J.-A.6
Shvets, E.7
McEwan, D.G.8
Clausen, T.H.9
Wild, P.10
-
18
-
-
53049103308
-
Structural basis for sorting mechanism of p62 in selective autophagy
-
PMID:18524774
-
Ichimura Y, Kumanomidou T, Sou YS, Mizushima T, Ezaki J, Ueno T, Kominami E, Yamane T, Tanaka K, Komatsu M. Structural basis for sorting mechanism of p62 in selective autophagy. J Biol Chem 2008; 283:22847-57; PMID:18524774; http://dx.doi.org/10.1074/jbc.M802182200
-
(2008)
J Biol Chem
, vol.283
, pp. 22847-22857
-
-
Ichimura, Y.1
Kumanomidou, T.2
Sou, Y.S.3
Mizushima, T.4
Ezaki, J.5
Ueno, T.6
Kominami, E.7
Yamane, T.8
Tanaka, K.9
Komatsu, M.10
-
19
-
-
76149086512
-
FYCO1 is a Rab7 effector that binds to LC3 and PI3P to mediate microtubule plus end-directed vesicle transport
-
PMID:20100911
-
Pankiv S, Alemu EA, Brech A, Bruun JA, Lamark T, Overvatn A, Bjørkøy G, Johansen T. FYCO1 is a Rab7 effector that binds to LC3 and PI3P to mediate microtubule plus end-directed vesicle transport. J Cell Biol 2010; 188:253-69; PMID:20100911; http://dx.doi.org/10.1083/jcb.200907015
-
(2010)
J Cell Biol
, vol.188
, pp. 253-269
-
-
Pankiv, S.1
Alemu, E.A.2
Brech, A.3
Bruun, J.A.4
Lamark, T.5
Overvatn, A.6
Bjørkøy, G.7
Johansen, T.8
-
20
-
-
84866426794
-
Binding of the Atg1/ULK1 kinase to the ubiquitin-like protein Atg8 regulates autophagy
-
PMID:22885598
-
Kraft C, Kijanska M, Kalie E, Siergiejuk E, Lee SS, Semplicio G, Stoffel I, Brezovich A, Verma M, Hansmann I, et al. Binding of the Atg1/ULK1 kinase to the ubiquitin-like protein Atg8 regulates autophagy. EMBO J 2012; 31:3691-703; PMID:22885598; http://dx.doi.org/10.1038/emboj.2012.225
-
(2012)
EMBO J
, vol.31
, pp. 3691-3703
-
-
Kraft, C.1
Kijanska, M.2
Kalie, E.3
Siergiejuk, E.4
Lee, S.S.5
Semplicio, G.6
Stoffel, I.7
Brezovich, A.8
Verma, M.9
Hansmann, I.10
-
21
-
-
84861396483
-
Rab GTPase-activating proteins in autophagy: Regulation of endocytic and autophagy pathways by direct binding to human ATG8 modifiers
-
PMID:22354992
-
Popovic D, Akutsu M, Novak I, Harper JW, Behrends C, Dikic I. Rab GTPase-activating proteins in autophagy: regulation of endocytic and autophagy pathways by direct binding to human ATG8 modifiers. Mol Cell Biol 2012; 32:1733-44; PMID:22354992; http://dx.doi.org/10.1128/MCB.06717-11
-
(2012)
Mol Cell Biol
, vol.32
, pp. 1733-1744
-
-
Popovic, D.1
Akutsu, M.2
Novak, I.3
Harper, J.W.4
Behrends, C.5
Dikic, I.6
-
22
-
-
84865164864
-
TP53INP1, a tumor suppressor, interacts with LC3 and ATG8-family proteins through the LC3-interacting region (LIR) and promotes autophagy-dependent cell death
-
PMID:22421968
-
Seillier M, Peuget S, Gayet O, Gauthier C, N'Guessan P, Monte M, Carrier A, Iovanna JL, Dusetti NJ. TP53INP1, a tumor suppressor, interacts with LC3 and ATG8-family proteins through the LC3-interacting region (LIR) and promotes autophagy-dependent cell death. Cell Death Differ 2012; 19:1525-35; PMID:22421968; http://dx.doi.org/10.1038/cdd.2012.30
-
(2012)
Cell Death Differ
, vol.19
, pp. 1525-1535
-
-
Seillier, M.1
Peuget, S.2
Gayet, O.3
Gauthier, C.4
N'Guessan, P.5
Monte, M.6
Carrier, A.7
Iovanna, J.L.8
Dusetti, N.J.9
-
23
-
-
84859012788
-
DOR/Tp53inp2 and Tp53inp1 constitute a metazoan gene family encoding dual regulators of autophagy and transcription
-
PMID:22470510
-
Sancho A, Duran J, García-España A, Mauvezin C, Alemu EA, Lamark T, Macias MJ, DeSalle R, Royo M, Sala D, et al. DOR/Tp53inp2 and Tp53inp1 constitute a metazoan gene family encoding dual regulators of autophagy and transcription. PLoS One 2012; 7:e34034; PMID:22470510; http://dx.doi.org/10. 1371/journal.pone.0034034
-
(2012)
PLoS One
, vol.7
-
-
Sancho, A.1
Duran, J.2
García-España, A.3
Mauvezin, C.4
Alemu, E.A.5
Lamark, T.6
Macias, M.J.7
DeSalle, R.8
Royo, M.9
Sala, D.10
-
24
-
-
64049119964
-
The TP53INP2 protein is required for autophagy in mammalian cells
-
PMID:19056683
-
Nowak J, Archange C, Tardivel-Lacombe J, Pontarotti P, Pébusque M-J, Vaccaro MI, Velasco G, Dagorn JC, Iovanna JL. The TP53INP2 protein is required for autophagy in mammalian cells. Mol Biol Cell 2009; 20:870-81; PMID:19056683; http://dx.doi.org/10.1091/mbc.E08-07-0671
-
(2009)
Mol Biol Cell
, vol.20
, pp. 870-881
-
-
Nowak, J.1
Archange, C.2
Tardivel-Lacombe, J.3
Pontarotti, P.4
Pébusque, M.-J.5
Vaccaro, M.I.6
Velasco, G.7
Dagorn, J.C.8
Iovanna, J.L.9
-
25
-
-
77954237882
-
Network organization of the human autophagy system
-
PMID:20562859
-
Behrends C, Sowa ME, Gygi SP, Harper JW. Network organization of the human autophagy system. Nature 2010; 466:68-76; PMID:20562859; http://dx.doi.org/10.1038/nature09204
-
(2010)
Nature
, vol.466
, pp. 68-76
-
-
Behrends, C.1
Sowa, M.E.2
Gygi, S.P.3
Harper, J.W.4
-
26
-
-
84869222326
-
ATG8 family proteins act as scaffolds for assembly of the ULK complex: Sequence requirements for LC3-interacting region (LIR) motifs
-
PMID:23043107
-
Alemu EA, Lamark T, Torgersen KM, Birgisdottir AB, Larsen KB, Jain A, Olsvik H, Øvervatn A, Kirkin V, Johansen T. ATG8 family proteins act as scaffolds for assembly of the ULK complex: sequence requirements for LC3-interacting region (LIR) motifs. J Biol Chem 2012; 287:39275-90; PMID:23043107; http://dx.doi.org/10.1074/jbc.M112.378109
-
(2012)
J Biol Chem
, vol.287
, pp. 39275-39290
-
-
Alemu, E.A.1
Lamark, T.2
Torgersen, K.M.3
Birgisdottir, A.B.4
Larsen, K.B.5
Jain, A.6
Olsvik, H.7
Øvervatn, A.8
Kirkin, V.9
Johansen, T.10
-
27
-
-
58149089315
-
Autophagy-independent incorporation of GFP-LC3 into protein aggregates is dependent on its interaction with p62/SQSTM1
-
PMID:18776740
-
Shvets E, Elazar Z. Autophagy-independent incorporation of GFP-LC3 into protein aggregates is dependent on its interaction with p62/SQSTM1. Autophagy 2008; 4:1054-6; PMID:18776740
-
(2008)
Autophagy
, vol.4
, pp. 1054-1056
-
-
Shvets, E.1
Elazar, Z.2
-
28
-
-
52649121942
-
The N-terminus and Phe52 residue of LC3 recruit p62/SQSTM1 into autophagosomes
-
PMID:18653543
-
Shvets E, Fass E, Scherz-Shouval R, Elazar Z. The N-terminus and Phe52 residue of LC3 recruit p62/SQSTM1 into autophagosomes. J Cell Sci 2008; 121:2685-95; PMID:18653543; http://dx.doi.org/10.1242/jcs.026005
-
(2008)
J Cell Sci
, vol.121
, pp. 2685-2695
-
-
Shvets, E.1
Fass, E.2
Scherz-Shouval, R.3
Elazar, Z.4
-
29
-
-
78349255372
-
Nucleocytoplasmic distribution and dynamics of the autophagosome marker EGFP-LC3
-
PMID:20352102
-
Drake KR, Kang M, Kenworthy AK. Nucleocytoplasmic distribution and dynamics of the autophagosome marker EGFP-LC3. PLoS One 2010; 5:e9806; PMID:20352102; http://dx.doi.org/10.1371/journal.pone.0009806
-
(2010)
PLoS One
, vol.5
-
-
Drake, K.R.1
Kang, M.2
Kenworthy, A.K.3
-
30
-
-
84861434988
-
Imaging protein complex formation in the autophagy pathway: Analysis of the interaction of LC3 and Atg4B(C74A) in live cells using Förster resonance energy transfer and fluorescence recovery after photobleaching
-
PMID:22352642
-
Kraft LJ, Kenworthy AK. Imaging protein complex formation in the autophagy pathway: analysis of the interaction of LC3 and Atg4B(C74A) in live cells using Förster resonance energy transfer and fluorescence recovery after photobleaching. J Biomed Opt 2012; 17:011008; PMID:22352642; http://dx.doi.org/10.1117/1.JBO.17.1.011008
-
(2012)
J Biomed Opt
, vol.17
, pp. 011008
-
-
Kraft, L.J.1
Kenworthy, A.K.2
-
31
-
-
0028289946
-
Molecular characterization of light chain 3. A microtubule binding subunit of MAP1A and MAP1B
-
PMID:7908909
-
Mann SS, Hammarback JA. Molecular characterization of light chain 3. A microtubule binding subunit of MAP1A and MAP1B. J Biol Chem 1994; 269:11492-7; PMID:7908909
-
(1994)
J Biol Chem
, vol.269
, pp. 11492-11497
-
-
Mann, S.S.1
Hammarback, J.A.2
-
32
-
-
34250900953
-
LC3, an autophagosome marker, can be incorporated into protein aggregates independent of autophagy: Caution in the interpretation of LC3 localization
-
PMID:17387262
-
Kuma A, Matsui M, Mizushima N. LC3, an autophagosome marker, can be incorporated into protein aggregates independent of autophagy: caution in the interpretation of LC3 localization. Autophagy 2007; 3:323-8; PMID:17387262
-
(2007)
Autophagy
, vol.3
, pp. 323-328
-
-
Kuma, A.1
Matsui, M.2
Mizushima, N.3
-
33
-
-
38049050178
-
Consideration about negative controls for LC3 and expression vectors for four colored fluorescent protein-LC3 negative controls
-
PMID:18000393
-
Tanida I, Yamaji T, Ueno T, Ishiura S, Kominami E, Hanada K. Consideration about negative controls for LC3 and expression vectors for four colored fluorescent protein-LC3 negative controls. Autophagy 2008; 4:131-4; PMID:18000393
-
(2008)
Autophagy
, vol.4
, pp. 131-134
-
-
Tanida, I.1
Yamaji, T.2
Ueno, T.3
Ishiura, S.4
Kominami, E.5
Hanada, K.6
-
34
-
-
84873254599
-
Simplified equation to extract diffusion coefficients from confocal FRAP data
-
PMID:22984916
-
Kang M, Day CA, Kenworthy AK, DiBenedetto E. Simplified equation to extract diffusion coefficients from confocal FRAP data. Traffic 2012; 13:1589-600; PMID:22984916; http://dx.doi.org/10.1111/tra.12008
-
(2012)
Traffic
, vol.13
, pp. 1589-1600
-
-
Kang, M.1
Day, C.A.2
Kenworthy, A.K.3
DiBenedetto, E.4
-
35
-
-
70349589255
-
A generalization of theory for two-dimensional fluorescence recovery after photobleaching applicable to confocal laser scanning microscopes
-
PMID:19720039
-
Kang M, Day CA, Drake K, Kenworthy AK, DiBenedetto E. A generalization of theory for two-dimensional fluorescence recovery after photobleaching applicable to confocal laser scanning microscopes. Biophys J 2009; 97:1501-11; PMID:19720039; http://dx.doi.org/10.1016/j.bpj.2009.06.017
-
(2009)
Biophys J
, vol.97
, pp. 1501-1511
-
-
Kang, M.1
Day, C.A.2
Drake, K.3
Kenworthy, A.K.4
DiBenedetto, E.5
-
36
-
-
78349238937
-
A quantitative approach to analyze binding diffusion kinetics by confocal FRAP
-
PMID:21044570
-
Kang M, Day CA, DiBenedetto E, Kenworthy AK. A quantitative approach to analyze binding diffusion kinetics by confocal FRAP. Biophys J 2010; 99:2737-47; PMID:21044570; http://dx.doi.org/10.1016/j.bpj.2010.09.013
-
(2010)
Biophys J
, vol.99
, pp. 2737-2747
-
-
Kang, M.1
Day, C.A.2
DiBenedetto, E.3
Kenworthy, A.K.4
-
37
-
-
84861587162
-
Fluorescence polarization and fluctuation analysis monitors subunit proximity, stoichiometry, and protein complex hydrodynamics
-
PMID:22666486
-
Nguyen TA, Sarkar P, Veetil JV, Koushik SV, Vogel SS. Fluorescence polarization and fluctuation analysis monitors subunit proximity, stoichiometry, and protein complex hydrodynamics. PLoS One 2012; 7:e38209; PMID:22666486; http://dx.doi.org/10.1371/journal.pone.0038209
-
(2012)
PLoS One
, vol.7
-
-
Nguyen, T.A.1
Sarkar, P.2
Veetil, J.V.3
Koushik, S.V.4
Vogel, S.S.5
-
38
-
-
0037281364
-
Fluorescence correlation spectroscopy
-
PMID:12624907
-
Müller JD, Chen Y, Gratton E. Fluorescence correlation spectroscopy. Methods Enzymol 2003; 361:69-92; PMID:12624907; http://dx.doi.org/10.1016/ S0076-6879(03)61006-2
-
(2003)
Methods Enzymol
, vol.361
, pp. 69-92
-
-
Müller, J.D.1
Chen, Y.2
Gratton, E.3
-
39
-
-
84877336276
-
LC3 fluorescent puncta in autophagosomes or in protein aggregates can be distinguished by FRAP analysis in living cells
-
PMID:23482084
-
Wang L, Chen M, Yang J, Zhang Z. LC3 fluorescent puncta in autophagosomes or in protein aggregates can be distinguished by FRAP analysis in living cells. Autophagy 2013; 9:756-69; PMID:23482084; http://dx.doi.org/10.4161/auto.23814
-
(2013)
Autophagy
, vol.9
, pp. 756-769
-
-
Wang, L.1
Chen, M.2
Yang, J.3
Zhang, Z.4
-
40
-
-
79953901405
-
Are assumptions about the model type necessary in reaction-diffusion modeling? A FRAP application
-
PMID:21354390
-
Mai J, Trump S, Ali R, Schiltz RL, Hager G, Hanke T, Lehmann I, Attinger S. Are assumptions about the model type necessary in reaction-diffusion modeling? A FRAP application. Biophys J 2011; 100:1178-88; PMID:21354390; http://dx.doi.org/10.1016/j.bpj.2011.01.041
-
(2011)
Biophys J
, vol.100
, pp. 1178-1188
-
-
Mai, J.1
Trump, S.2
Ali, R.3
Schiltz, R.L.4
Hager, G.5
Hanke, T.6
Lehmann, I.7
Attinger, S.8
-
41
-
-
9144224360
-
Human light chain 3/MAP1LC3B is cleaved at its carboxyl-terminal Met121 to expose Gly120 for lipidation and targeting to autophagosomal membranes
-
PMID:15355958
-
Tanida I, Ueno T, Kominami E. Human light chain 3/MAP1LC3B is cleaved at its carboxyl-terminal Met121 to expose Gly120 for lipidation and targeting to autophagosomal membranes. J Biol Chem 2004; 279:47704-10; PMID:15355958; http://dx.doi.org/10.1074/jbc.M407016200
-
(2004)
J Biol Chem
, vol.279
, pp. 47704-47710
-
-
Tanida, I.1
Ueno, T.2
Kominami, E.3
-
42
-
-
80053207286
-
The Chlamydia effector chlamydial outer protein N (CopN) sequesters tubulin and prevents microtubule assembly
-
PMID:21841198
-
Archuleta TL, Du Y, English CA, Lory S, Lesser C, Ohi MD, Ohi R, Spiller BW. The Chlamydia effector chlamydial outer protein N (CopN) sequesters tubulin and prevents microtubule assembly. J Biol Chem 2011; 286:33992-8; PMID:21841198; http://dx.doi.org/10.1074/jbc.M111.258426
-
(2011)
J Biol Chem
, vol.286
, pp. 33992-33998
-
-
Archuleta, T.L.1
Du, Y.2
English, C.A.3
Lory, S.4
Lesser, C.5
Ohi, M.D.6
Ohi, R.7
Spiller, B.W.8
-
44
-
-
34548417621
-
Fluorescent protein FRET: The good, the bad and the ugly
-
PMID:17764955
-
Piston DW, Kremers GJ. Fluorescent protein FRET: the good, the bad and the ugly. Trends Biochem Sci 2007; 32:407-14; PMID:17764955; http://dx.doi.org/10.1016/j.tibs.2007.08.003
-
(2007)
Trends Biochem Sci
, vol.32
, pp. 407-414
-
-
Piston, D.W.1
Kremers, G.J.2
-
45
-
-
84929047634
-
Time Resolved Fluorescence Anisotropy
-
Periasamy A, Clegg RM, eds. Boca Raton: Taylor & Francis
-
Vogel SS, Thaler C, Blank PS, Koushik SV. Time Resolved Fluorescence Anisotropy. In: Periasamy A, Clegg RM, eds. FLIM Microscopy in Biology and Medicine. Boca Raton: Taylor & Francis, 2010:245-90
-
(2010)
FLIM Microscopy in Biology and Medicine
, pp. 245-290
-
-
Vogel, S.S.1
Thaler, C.2
Blank, P.S.3
Koushik, S.V.4
-
46
-
-
0017364523
-
Rotational relaxation of 70S ribosomes by a depolarization method using triplet probes
-
PMID:323851
-
Lavalette D, Amand B, Pochon F. Rotational relaxation of 70S ribosomes by a depolarization method using triplet probes. Proc Natl Acad Sci U S A 1977; 74:1407-11; PMID:323851; http://dx.doi.org/10.1073/pnas.74.4.1407
-
(1977)
Proc Natl Acad Sci U S A
, vol.74
, pp. 1407-1411
-
-
Lavalette, D.1
Amand, B.2
Pochon, F.3
-
47
-
-
0016196137
-
Study of Escherichia coli ribosomes by intensity fluctuation spectroscopy of scattered laser light
-
PMID:4603215
-
Koppel DE. Study of Escherichia coli ribosomes by intensity fluctuation spectroscopy of scattered laser light. Biochemistry 1974; 13:2712-9; PMID:4603215; http://dx.doi.org/10.1021/bi00710a009
-
(1974)
Biochemistry
, vol.13
, pp. 2712-2719
-
-
Koppel, D.E.1
-
48
-
-
80555144189
-
Atg8 transfer from Atg7 to Atg3: A distinctive E1-E2 architecture and mechanism in the autophagy pathway
-
PMID:22055190
-
Taherbhoy AM, Tait SW, Kaiser SE, Williams AH, Deng A, Nourse A, Hammel M, Kurinov I, Rock CO, Green DR, et al. Atg8 transfer from Atg7 to Atg3: a distinctive E1-E2 architecture and mechanism in the autophagy pathway. Mol Cell 2011; 44:451-61; PMID:22055190; http://dx.doi.org/10.1016/j.molcel.2011.08.034
-
(2011)
Mol Cell
, vol.44
, pp. 451-461
-
-
Taherbhoy, A.M.1
Tait, S.W.2
Kaiser, S.E.3
Williams, A.H.4
Deng, A.5
Nourse, A.6
Hammel, M.7
Kurinov, I.8
Rock, C.O.9
Green, D.R.10
-
49
-
-
0038325675
-
Mouse Apg16L, a novel WD-repeat protein, targets to the autophagic isolation membrane with the Apg12-Apg5 conjugate
-
PMID:12665549
-
Mizushima N, Kuma A, Kobayashi Y, Yamamoto A, Matsubae M, Takao T, Natsume T, Ohsumi Y, Yoshimori T. Mouse Apg16L, a novel WD-repeat protein, targets to the autophagic isolation membrane with the Apg12-Apg5 conjugate. J Cell Sci 2003; 116:1679-88; PMID:12665549; http://dx.doi.org/10.1242/jcs.00381
-
(2003)
J Cell Sci
, vol.116
, pp. 1679-1688
-
-
Mizushima, N.1
Kuma, A.2
Kobayashi, Y.3
Yamamoto, A.4
Matsubae, M.5
Takao, T.6
Natsume, T.7
Ohsumi, Y.8
Yoshimori, T.9
-
50
-
-
38049098543
-
The Atg12-Atg5 conjugate has a novel E3-like activity for protein lipidation in autophagy
-
PMID:17986448
-
Hanada T, Noda NN, Satomi Y, Ichimura Y, Fujioka Y, Takao T, Inagaki F, Ohsumi Y. The Atg12-Atg5 conjugate has a novel E3-like activity for protein lipidation in autophagy. J Biol Chem 2007; 282:37298-302; PMID:17986448; http://dx.doi.org/10.1074/jbc.C700195200
-
(2007)
J Biol Chem
, vol.282
, pp. 37298-37302
-
-
Hanada, T.1
Noda, N.N.2
Satomi, Y.3
Ichimura, Y.4
Fujioka, Y.5
Takao, T.6
Inagaki, F.7
Ohsumi, Y.8
-
51
-
-
43949143804
-
The Atg16L complex specifies the site of LC3 lipidation for membrane biogenesis in autophagy
-
PMID:18321988
-
Fujita N, Itoh T, Omori H, Fukuda M, Noda T, Yoshimori T. The Atg16L complex specifies the site of LC3 lipidation for membrane biogenesis in autophagy. Mol Biol Cell 2008; 19:2092-100; PMID:18321988; http://dx.doi.org/10. 1091/mbc.E07-12-1257
-
(2008)
Mol Biol Cell
, vol.19
, pp. 2092-2100
-
-
Fujita, N.1
Itoh, T.2
Omori, H.3
Fukuda, M.4
Noda, T.5
Yoshimori, T.6
-
52
-
-
0032494098
-
Microtubule involvement in translational regulation of fibronectin expression by light chain 3 of microtubule-associated protein 1 in vascular smooth muscle cells
-
PMID:9734470
-
Zhou B, Rabinovitch M. Microtubule involvement in translational regulation of fibronectin expression by light chain 3 of microtubule-associated protein 1 in vascular smooth muscle cells. Circ Res 1998; 83:481-9; PMID:9734470; http://dx.doi.org/10.1161/01.RES.83.5.481
-
(1998)
Circ Res
, vol.83
, pp. 481-489
-
-
Zhou, B.1
Rabinovitch, M.2
-
53
-
-
75149118941
-
Determining Atg protein stoichiometry at the phagophore assembly site by fluorescence microscopy
-
PMID:20131413
-
Geng J, Klionsky DJ. Determining Atg protein stoichiometry at the phagophore assembly site by fluorescence microscopy. Autophagy 2010; 6:144-7; PMID:20131413; http://dx.doi.org/10.4161/auto.6.1.10249
-
(2010)
Autophagy
, vol.6
, pp. 144-147
-
-
Geng, J.1
Klionsky, D.J.2
-
55
-
-
43149119497
-
Evidence for a common mode of transcription factor interaction with chromatin as revealed by improved quantitative fluorescence recovery after photobleaching
-
PMID:18199661
-
Mueller F, Wach P, McNally JG. Evidence for a common mode of transcription factor interaction with chromatin as revealed by improved quantitative fluorescence recovery after photobleaching. Biophys J 2008; 94:3323-39; PMID:18199661; http://dx.doi.org/10.1529/biophysj.107.123182
-
(2008)
Biophys J
, vol.94
, pp. 3323-3339
-
-
Mueller, F.1
Wach, P.2
McNally, J.G.3
-
56
-
-
0017192686
-
Mobility measurement by analysis of fluorescence photobleaching recovery kinetics
-
PMID:786399
-
Axelrod D, Koppel DE, Schlessinger J, Elson E, Webb WW. Mobility measurement by analysis of fluorescence photobleaching recovery kinetics. Biophys J 1976; 16:1055-69; PMID:786399; http://dx.doi.org/10.1016/S0006- 3495(76)85755-4
-
(1976)
Biophys J
, vol.16
, pp. 1055-1069
-
-
Axelrod, D.1
Koppel, D.E.2
Schlessinger, J.3
Elson, E.4
Webb, W.W.5
-
57
-
-
4644243088
-
Intracellular macromolecular mobility measured by fluorescence recovery after photobleaching with confocal laser scanning microscopes
-
PMID:15292455
-
Braga J, Desterro JM, Carmo-Fonseca M. Intracellular macromolecular mobility measured by fluorescence recovery after photobleaching with confocal laser scanning microscopes. Mol Biol Cell 2004; 15:4749-60; PMID:15292455; http://dx.doi.org/10.1091/mbc.E04-06-0496
-
(2004)
Mol Biol Cell
, vol.15
, pp. 4749-4760
-
-
Braga, J.1
Desterro, J.M.2
Carmo-Fonseca, M.3
-
59
-
-
0028869663
-
Two-photon fluorescence correlation spectroscopy: Method and application to the intracellular environment
-
PMID:7696520
-
Berland KM, So PT, Gratton E. Two-photon fluorescence correlation spectroscopy: method and application to the intracellular environment. Biophys J 1995; 68:694-701; PMID:7696520; http://dx.doi.org/10.1016/S0006-3495(95)80230-4
-
(1995)
Biophys J
, vol.68
, pp. 694-701
-
-
Berland, K.M.1
So, P.T.2
Gratton, E.3
-
60
-
-
0036220117
-
Molecular brightness characterization of EGFP in vivo by fluorescence fluctuation spectroscopy
-
PMID:11751302
-
Chen Y, Müller JD, Ruan Q, Gratton E. Molecular brightness characterization of EGFP in vivo by fluorescence fluctuation spectroscopy. Biophys J 2002; 82:133-44; PMID:11751302; http://dx.doi.org/10.1016/S0006- 3495(02)75380-0
-
(2002)
Biophys J
, vol.82
, pp. 133-144
-
-
Chen, Y.1
Müller, J.D.2
Ruan, Q.3
Gratton, E.4
|