-
1
-
-
84876460979
-
Incidence and trends of infection with pathogens transmitted commonly through food-Foodborne Diseases Active Surveillance Network, 10 U. S sites, 1996-2012
-
CDC. 2013. Incidence and trends of infection with pathogens transmitted commonly through food-Foodborne Diseases Active Surveillance Network, 10 U. S. sites, 1996-2012. MMWR Morb. Mortal. Wkly. Rep. 62:283-287. http://www.cdc.gov/ mmwr/preview/mmwrhtml/mm6215a2.htm.
-
(2013)
MMWR Morb. Mortal. Wkly. Rep.
, vol.62
, pp. 283-287
-
-
-
2
-
-
84873134414
-
Surveillance for foodborne disease outbreaks-United States, 2009-2010. MMWRMorb
-
CDC. 2013. Surveillance for foodborne disease outbreaks-United States, 2009-2010. MMWRMorb. Mortal. Wkly. Rep. 62:41-47. http://www.cdc.gov/mmwr/ preview/mmwrhtml/mm6203a1.htm.
-
(2013)
Mortal. Wkly. Rep.
, vol.62
, pp. 41-47
-
-
-
3
-
-
0028268337
-
Phylogenetics of Salmonella enteritidis
-
Stanley J, Baquar N. 1994. Phylogenetics of Salmonella enteritidis. Int. J. Food Microbiol. 21:79-87. http://dx.doi.org/10.1016/0168-1605 (94) 90202-X.
-
(1994)
Int. J. Food Microbiol.
, vol.21
, pp. 79-87
-
-
Stanley, J.1
Baquar, N.2
-
4
-
-
83055180142
-
Methodologies for Salmonella enterica subsp enterica subtyping: Gold standards and alternatives
-
Wattiau P, Boland C, Bertrand S. 2011. Methodologies for Salmonella enterica subsp enterica subtyping: gold standards and alternatives. Appl. Environ. Microbiol. 77:7877-7885. http://dx.doi.org/10.1128/AEM.05527-11.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 7877-7885
-
-
Wattiau, P.1
Boland, C.2
Bertrand, S.3
-
6
-
-
84862101232
-
The epidemiology of travel-related Salmonella Enteritidis in Ontario, Canada, 2010-2011
-
Tighe MK, Savage R, Vrbova L, Toolan M, Whitfield Y, Varga C, Lee B, Allen V, Maki A, Walton R, Johnson C, Dhar B, Ahmed R, Crowcroft NS, Middleton D. 2012. The epidemiology of travel-related Salmonella Enteritidis in Ontario, Canada, 2010-2011. BMC Public Health 12:310. http://dx.doi.org/10.1186/1471- 2458-12-310.
-
(2012)
BMC Public Health
, vol.12
, pp. 310
-
-
Tighe, M.K.1
Savage, R.2
Vrbova, L.3
Toolan, M.4
Whitfield, Y.5
Varga, C.6
Lee, B.7
Allen, V.8
Maki, A.9
Walton, R.10
Johnson, C.11
Dhar, B.12
Ahmed, R.13
Crowcroft, N.S.14
Middleton, D.15
-
7
-
-
0026597289
-
Salmonella bacteraemia in England and Wales, 1981-1990
-
Threlfall EJ, Hall ML, Rowe B. 1992. Salmonella bacteraemia in England and Wales, 1981-1990. J. Clin. Pathol. 45:34-36. http://dx.doi.org/10.1136/jcp. 45.1.34.
-
(1992)
J. Clin. Pathol.
, vol.45
, pp. 34-36
-
-
Threlfall, E.J.1
Hall, M.L.2
Rowe, B.3
-
8
-
-
0028173501
-
Salmonella enteritidis phage types in Germany
-
Schroeter A, Ward LR, Rowe B, Protz D, Hartung M, Helmuth R. 1994. Salmonella enteritidis phage types in Germany. Eur. J. Epidemiol. 10:645-648. http://dx.doi.org/10.1007/BF01719587.
-
(1994)
Eur. J. Epidemiol.
, vol.10
, pp. 645-648
-
-
Schroeter, A.1
Ward, L.R.2
Rowe, B.3
Protz, D.4
Hartung, M.5
Helmuth, R.6
-
9
-
-
0028365412
-
The characterization of Danish isolates of Salmonella enterica serovar Enteritidis by phage typing and plasmid profiling: 1980-1990
-
Brown DJ, Baggesen DL, Hansen HB, Hansen HC, Bisgaard M. 1994. The characterization of Danish isolates of Salmonella enterica serovar Enteritidis by phage typing and plasmid profiling: 1980-1990. APMIS 102:208-214. http://dx.doi.org/10.1111/j.1699-0463.1994.tb04866.x.
-
(1994)
APMIS
, vol.102
, pp. 208-214
-
-
Brown, D.J.1
Baggesen, D.L.2
Hansen, H.B.3
Hansen, H.C.4
Bisgaard, M.5
-
10
-
-
13844297756
-
Emergence of new Salmonella Enteritidis phage types in Europe? Surveillance of infections in returning travellers
-
Nygard K, de Jong B, Guerin PJ, Andersson Y, Olsson A, Giesecke J. 2004. Emergence of new Salmonella Enteritidis phage types in Europe? Surveillance of infections in returning travellers. BMC Med. 2:32. http://dx.doi.org/10.1186/ 1741-7015-2-32.
-
(2004)
BMC Med.
, vol.2
, pp. 32
-
-
Nygard, K.1
De Jong, B.2
Guerin, P.J.3
Andersson, Y.4
Olsson, A.5
Giesecke, J.6
-
11
-
-
80053243170
-
Salmonella infections associated with international travel: A Foodborne Diseases Active Surveillance Network (FoodNet) study
-
Johnson LR, Gould LH, Dunn JR, Berkelman R, Mahon BE. 2011. Salmonella infections associated with international travel: a Foodborne Diseases Active Surveillance Network (FoodNet) study. Foodborne Pathog. Dis. 8:1031-1037. http://dx.doi.org/10.1089/fpd.2011.0854.
-
(2011)
Foodborne Pathog. Dis.
, vol.8
, pp. 1031-1037
-
-
Johnson, L.R.1
Gould, L.H.2
Dunn, J.R.3
Berkelman, R.4
Mahon, B.E.5
-
12
-
-
18744431519
-
Risk factors for sporadic infection with Salmonella enteritidis, Denmark, 1997-1999
-
Molbak K, Neimann J. 2002. Risk factors for sporadic infection with Salmonella enteritidis, Denmark, 1997-1999. Am. J. Epidemiol. 156:654-661. http://dx.doi.org/10.1093/aje/kwf096.
-
(2002)
Am. J. Epidemiol.
, vol.156
, pp. 654-661
-
-
Molbak, K.1
Neimann, J.2
-
13
-
-
0034130197
-
Epidemiologic typing of Salmonella enterica serotype Enteritidis in a Canadawide outbreak of gastroenteritis due to contaminated cheese
-
Ahmed R, Soule G, Demczuk WH, Clark C, Khakhria R, Ratnam S, Marshall S, Ng LK, Woodward DL, Johnson WM, Rodgers FG. 2000. Epidemiologic typing of Salmonella enterica serotype Enteritidis in a Canadawide outbreak of gastroenteritis due to contaminated cheese. J. Clin. Microbiol. 38:2403-2406. http://jcm.asm.org/content/38/6/2403.long.
-
(2000)
J. Clin. Microbiol.
, vol.38
, pp. 2403-2406
-
-
Ahmed, R.1
Soule, G.2
Demczuk, W.H.3
Clark, C.4
Khakhria, R.5
Ratnam, S.6
Marshall, S.7
Ng, L.K.8
Woodward, D.L.9
Johnson, W.M.10
Rodgers, F.G.11
-
14
-
-
0027225665
-
Interrelationships between strains of Salmonella enteritidis belonging to phage types 4, 7, 7a, 8, 13, 13a, 23, 24 and 30
-
Threlfall EJ, Chart H, Ward LR, de Sa JD, Rowe B. 1993. Interrelationships between strains of Salmonella enteritidis belonging to phage types 4, 7, 7a, 8, 13, 13a, 23, 24 and 30. J. Appl. Bacteriol. 75:43-48. http://dx.doi.org/10.1111/j.1365-2672.1993.tb03405.x.
-
(1993)
J. Appl. Bacteriol.
, vol.75
, pp. 43-48
-
-
Threlfall, E.J.1
Chart, H.2
Ward, L.R.3
De Sa, J.D.4
Rowe, B.5
-
15
-
-
0031194142
-
Genotypic evaluation of Salmonella enteritidis isolates of known phage types by arbitrarily primed polymerase chain reaction
-
Fadl AA, Khan MI. 1997. Genotypic evaluation of Salmonella enteritidis isolates of known phage types by arbitrarily primed polymerase chain reaction. Avian Dis. 41:732-737. http://dx.doi.org/10.2307/1592168.
-
(1997)
Avian Dis.
, vol.41
, pp. 732-737
-
-
Fadl, A.A.1
Khan, M.I.2
-
16
-
-
0024694981
-
Conversion of Salmonella enteritidis phage type 4 to phage type 7 involves loss of lipopolysaccharide with concomitant loss of virulence
-
Chart H, Row B, Threlfall EJ, Ward LR. 1989. Conversion of Salmonella enteritidis phage type 4 to phage type 7 involves loss of lipopolysaccharide with concomitant loss of virulence. FEMS Microbiol. Lett. 51:37-40.
-
(1989)
FEMS Microbiol. Lett.
, vol.51
, pp. 37-40
-
-
Chart, H.1
Row, B.2
Threlfall, E.J.3
Ward, L.R.4
-
17
-
-
0024342887
-
Acquisition of a drug resistance plasmid converts Salmonella enteritidis phage type 4 to phage type 24
-
Frost JA, Ward LR, Rowe B. 1989. Acquisition of a drug resistance plasmid converts Salmonella enteritidis phage type 4 to phage type 24. Epidemiol. Infect. 103:243-248. http://dx.doi.org/10.1017/S0950268800030594.
-
(1989)
Epidemiol. Infect.
, vol.103
, pp. 243-248
-
-
Frost, J.A.1
Ward, L.R.2
Rowe, B.3
-
18
-
-
84861227065
-
Development of a sequence typing scheme for differentiation of Salmonella Enteritidis strains
-
Tankouo-Sandjong B, Kinde H, Wallace I. 2012. Development of a sequence typing scheme for differentiation of Salmonella Enteritidis strains. FEMS Microbiol. Lett. 331:165-175. http://dx.doi.org/10.1111/j.1574-6968.2012.02568. x.
-
(2012)
FEMS Microbiol. Lett.
, vol.331
, pp. 165-175
-
-
Tankouo-Sandjong, B.1
Kinde, H.2
Wallace, I.3
-
19
-
-
84863115385
-
Genetic relationships of phage types and single nucleotide polymorphism typing of Salmonella enterica serovar Typhimurium
-
Pang S, Octavia S, Reeves PR, Wang Q, Gilbert GL, Sintchenko V, Lan R. 2012. Genetic relationships of phage types and single nucleotide polymorphism typing of Salmonella enterica serovar Typhimurium. J. Clin. Microbiol. 50:727-734. http://dx.doi.org/10.1128/JCM.01284-11.
-
(2012)
J. Clin. Microbiol.
, vol.50
, pp. 727-734
-
-
Pang, S.1
Octavia, S.2
Reeves, P.R.3
Wang, Q.4
Gilbert, G.L.5
Sintchenko, V.6
Lan, R.7
-
20
-
-
24944457214
-
Differences in gene content between Salmonella enterica serovar Enteritidis isolates and comparison to closely related serovars Gallinarum and Dublin
-
Porwollik S, Santiviago CA, Cheng P, Florea L, Jackson S, McClelland M. 2005. Differences in gene content between Salmonella enterica serovar Enteritidis isolates and comparison to closely related serovars Gallinarum and Dublin. J. Bacteriol. 187:6545-6555. http://dx.doi.org/10.1128/JB.187.18.6545- 6555.2005.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 6545-6555
-
-
Porwollik, S.1
Santiviago, C.A.2
Cheng, P.3
Florea, L.4
Jackson, S.5
McClelland, M.6
-
21
-
-
0025740447
-
Evolutionary lines among Salmonella enteritidis phage types are identified by insertion sequence IS200 distribution
-
Stanley J, Jones CS, Threlfall EJ. 1991. Evolutionary lines among Salmonella enteritidis phage types are identified by insertion sequence IS200 distribution. FEMS Microbiol. Lett. 66:83-89.
-
(1991)
FEMS Microbiol. Lett.
, vol.66
, pp. 83-89
-
-
Stanley, J.1
Jones, C.S.2
Threlfall, E.J.3
-
22
-
-
0028107286
-
Clonal lines of Salmonella enterica serotype Enteritidis documented by Is200-, ribo-, pulsed-field gel-electrophoresis and RFLP typing
-
Olsen JE, Skov MN, Threlfall EJ, Brown DJ. 1994. Clonal lines of Salmonella enterica serotype Enteritidis documented by Is200-, ribo-, pulsed-field gel-electrophoresis and RFLP typing. J. Med. Microbiol. 40:15-22. http://dx.doi.org/10.1099/00222615-40-1-15.
-
(1994)
J. Med. Microbiol.
, vol.40
, pp. 15-22
-
-
Olsen, J.E.1
Skov, M.N.2
Threlfall, E.J.3
Brown, D.J.4
-
23
-
-
0141817852
-
Multi-locus sequence typing: A tool for global epidemiology
-
Urwin R, Maiden MC. 2003. Multi-locus sequence typing: a tool for global epidemiology. Trends Microbiol. 11:479-487. http://dx.doi.org/10.1016/j.tim. 2003.08.006.
-
(2003)
Trends Microbiol.
, vol.11
, pp. 479-487
-
-
Urwin, R.1
Maiden, M.C.2
-
24
-
-
79958246267
-
Multi-locus sequence typing of Salmonella enterica subsp enterica serovar Enteritidis strains in Japan between 1973 and 2004
-
Noda T, Murakami K, Asai T, Etoh Y, Ishihara T, Kuroki T, Horikawa K, Fujimoto S. 2011. Multi-locus sequence typing of Salmonella enterica subsp enterica serovar Enteritidis strains in Japan between 1973 and 2004. Acta Vet. Scand. 53:38. http://dx.doi.org/10.1186/1751-0147-53-38.
-
(2011)
Acta Vet. Scand.
, vol.53
, pp. 38
-
-
Noda, T.1
Murakami, K.2
Asai, T.3
Etoh, Y.4
Ishihara, T.5
Kuroki, T.6
Horikawa, K.7
Fujimoto, S.8
-
25
-
-
53849111617
-
Evolution, population structure, and phylogeography of genetically monomorphic bacterial pathogens
-
Achtman M. 2008. Evolution, population structure, and phylogeography of genetically monomorphic bacterial pathogens. Annu. Rev. Microbiol. 62:53-70. http://dx.doi.org/10.1146/annurev. micro.62.081307.162832.
-
(2008)
Annu. Rev. Microbiol.
, vol.62
, pp. 53-70
-
-
Achtman, M.1
-
26
-
-
30744460678
-
Global phylogeny of Mycobacterium tuberculosis based on single nucleotide polymorphism (SNP) analysis: Insights into tuberculosis evolution, phylogenetic accuracy of other DNA fingerprinting systems, and recommendations for a minimal standard SNP set
-
Filliol I, Motiwala AS, Cavatore M, Qi W, Hazbon MH, Bobadilla del Valle M, Fyfe J, Garcia-Garcia L, Rastogi N, Sola C, Zozio T, Guerrero MI, Leon CI, Crabtree J, Angiuoli S, Eisenach KD, Durmaz R, Joloba ML, Rendon A, Sifuentes-Osornio J, Ponce de Leon A, Cave MD, Fleischmann R, Whittam TS, Alland D. 2006. Global phylogeny of Mycobacterium tuberculosis based on single nucleotide polymorphism (SNP) analysis: insights into tuberculosis evolution, phylogenetic accuracy of other DNA fingerprinting systems, and recommendations for a minimal standard SNP set. J. Bacteriol. 188:759-772. http://dx.doi.org/10. 1128/JB.188.2.759-772.2006.
-
(2006)
J. Bacteriol.
, vol.188
, pp. 759-772
-
-
Filliol, I.1
Motiwala, A.S.2
Cavatore, M.3
Qi, W.4
Hazbon, M.H.5
Bobadilla Del Valle, M.6
Fyfe, J.7
Garcia-Garcia, L.8
Rastogi, N.9
Sola, C.10
Zozio, T.11
Guerrero, M.I.12
Leon, C.I.13
Crabtree, J.14
Angiuoli, S.15
Eisenach, K.D.16
Durmaz, R.17
Joloba, M.L.18
Rendon, A.19
Sifuentes-Osornio, J.20
Ponce De Leon, P.A.21
Cave, M.D.22
Fleischmann, R.23
Whittam, T.S.24
Alland, D.25
more..
-
27
-
-
37249009751
-
Limited genetic diversity in Salmonella enterica serovar Enteritidis PT13
-
Olson AB, Andrysiak AK, Tracz DM, Guard-Bouldin J, Demczuk W, Ng LK, Maki A, Jamieson F, Gilmour MW. 2007. Limited genetic diversity in Salmonella enterica serovar Enteritidis PT13. BMC Microbiol. 7:87. http://dx.doi.org/10. 1186/1471-2180-7-87.
-
(2007)
BMC Microbiol.
, vol.7
, pp. 87
-
-
Olson, A.B.1
Andrysiak, A.K.2
Tracz, D.M.3
Guard-Bouldin, J.4
Demczuk, W.5
Ng, L.K.6
Maki, A.7
Jamieson, F.8
Gilmour, M.W.9
-
28
-
-
80053344646
-
Single nucleotide polymorphisms that differentiate two subpopulations of Salmonella Enteritidis within phage type
-
Guard J, Morales CA, Fedorka-Cray P, Gast RK. 2011. Single nucleotide polymorphisms that differentiate two subpopulations of Salmonella Enteritidis within phage type. BMC Res. Notes 4:369. http://dx.doi.org/10.1186/1756-0500-4- 369.
-
(2011)
BMC Res. Notes
, vol.4
, pp. 369
-
-
Guard, J.1
Morales, C.A.2
Fedorka-Cray, P.3
Gast, R.K.4
-
29
-
-
36348943603
-
Single-nucleotide-polymorphism typing and genetic relationships of Salmonella enterica serovar Typhi isolates
-
Octavia S, Lan R. 2007. Single-nucleotide-polymorphism typing and genetic relationships of Salmonella enterica serovar Typhi isolates. J. Clin. Microbiol. 45:3795-3801. http://dx.doi.org/10.1128/JCM.00720-07.
-
(2007)
J. Clin. Microbiol.
, vol.45
, pp. 3795-3801
-
-
Octavia, S.1
Lan, R.2
-
30
-
-
84873486628
-
On the evolutionary history, population genetics and diversity among isolates of Salmonella Enteritidis PFGE pattern JEGX01.0004
-
Allard MW, Luo Y, Strain E, Pettengill J, Timme R, Wang C, Li C, Keys CE, Zheng J, Stones R, Wilson MR, Musser SM, Brown EW. 2013. On the evolutionary history, population genetics and diversity among isolates of Salmonella Enteritidis PFGE pattern JEGX01.0004. PLoS One 8:e55254. http://dx.doi.org/10. 1371/journal.pone.0055254.
-
(2013)
PLoS One
, vol.8
-
-
Allard, M.W.1
Luo, Y.2
Strain, E.3
Pettengill, J.4
Timme, R.5
Wang, C.6
Li, C.7
Keys, C.E.8
Zheng, J.9
Stones, R.10
Wilson, M.R.11
Musser, S.M.12
Brown, E.W.13
-
31
-
-
84868613754
-
Draft genome sequences of 21 Salmonella enterica serovar Enteritidis strains
-
Timme RE, Allard MW, Luo Y, Strain E, Pettengill J, Wang C, Li C, Keys CE, Zheng J, Stones R, Wilson MR, Musser SM, Brown EW. 2012. Draft genome sequences of 21 Salmonella enterica serovar Enteritidis strains. J. Bacteriol. 194:5994-5995. http://dx.doi.org/10.1128/JB.01289-12.
-
(2012)
J. Bacteriol.
, vol.194
, pp. 5994-5995
-
-
Timme, R.E.1
Allard, M.W.2
Luo, Y.3
Strain, E.4
Pettengill, J.5
Wang, C.6
Li, C.7
Keys, C.E.8
Zheng, J.9
Stones, R.10
Wilson, M.R.11
Musser, S.M.12
Brown, E.W.13
-
32
-
-
0023424976
-
A phage-typing scheme for Salmonella enteritidis
-
Ward LR, de Sa JD, Rowe B. 1987. A phage-typing scheme for Salmonella enteritidis. Epidemiol. Infect. 99:291-294. http://dx.doi.org/10.1017/ S0950268800067765.
-
(1987)
Epidemiol. Infect.
, vol.99
, pp. 291-294
-
-
Ward, L.R.1
De Sa, J.D.2
Rowe, B.3
-
33
-
-
3543051830
-
Mauve: Multiple alignment of conserved genomic sequence with rearrangements
-
Darling AC, Mau B, Blattner FR, Perna NT. 2004. Mauve: multiple alignment of conserved genomic sequence with rearrangements. Genome Res. 14:1394-1403. http://dx.doi.org/10.1101/gr.2289704.
-
(2004)
Genome Res.
, vol.14
, pp. 1394-1403
-
-
Darling, A.C.1
Mau, B.2
Blattner, F.R.3
Perna, N.T.4
-
34
-
-
79957613599
-
MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28:2731-2739. http://dx.doi.org/10.1093/molbev/msr121.
-
(2011)
Mol. Biol. Evol.
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
35
-
-
79952406380
-
SequenceMatrix: Concatenation software for the fast assembly of multi-gene datasets with character set and codon information
-
Vaidya G, Lohman DJ, Meier R. 2011. SequenceMatrix: concatenation software for the fast assembly of multi-gene datasets with character set and codon information. Cladistics 27:171-180. http://dx.doi.org/10.1111/j.1096-0031. 2010.00329.x.
-
(2011)
Cladistics
, vol.27
, pp. 171-180
-
-
Vaidya, G.1
Lohman, D.J.2
Meier, R.3
-
36
-
-
65649117685
-
DnaSP v5: A software for comprehensive analysis of DNA polymorphism data
-
Librado P, Rozas J. 2009. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25:1451-1452. http://dx.doi.org/10. 1093/bioinformatics/btp187.
-
(2009)
Bioinformatics
, vol.25
, pp. 1451-1452
-
-
Librado, P.1
Rozas, J.2
-
37
-
-
0021066244
-
Evolutionary relationship of DNA sequences in finite populations
-
Tajima F. 1983. Evolutionary relationship of DNA sequences in finite populations. Genetics 105:437-460.
-
(1983)
Genetics
, vol.105
, pp. 437-460
-
-
Tajima, F.1
-
38
-
-
0034118493
-
Inference of population structure using multilocus genotype data
-
Pritchard JK, Stephens M, Donnelly P. 2000. Inference of population structure using multilocus genotype data. Genetics 155:945-959. http://www.genetics.org/content/155/2/945.long.
-
(2000)
Genetics
, vol.155
, pp. 945-959
-
-
Pritchard, J.K.1
Stephens, M.2
Donnelly, P.3
-
39
-
-
68949103876
-
Inferring weak population structure with the assistance of sample group information
-
Hubisz MJ, Falush D, Stephens M, Pritchard JK. 2009. Inferring weak population structure with the assistance of sample group information. Mol. Ecol. Resour. 9:1322-1332. http://dx.doi.org/10.1111/j.1755-0998.2009.02591.x.
-
(2009)
Mol. Ecol. Resour.
, vol.9
, pp. 1322-1332
-
-
Hubisz, M.J.1
Falush, D.2
Stephens, M.3
Pritchard, J.K.4
-
41
-
-
0030615203
-
Evolution of the mitochondrial cytochrome oxidase II gene in Collembola
-
Frati F, Simon C, Sullivan J, Swofford DL. 1997. Evolution of the mitochondrial cytochrome oxidase II gene in Collembola. J. Mol. Evol. 44:145-158. http://dx.doi.org/10.1007/PL00006131.
-
(1997)
J. Mol. Evol.
, vol.44
, pp. 145-158
-
-
Frati, F.1
Simon, C.2
Sullivan, J.3
Swofford, D.L.4
-
42
-
-
0031224772
-
Phylogeography and molecular systematics of the Peromyscus aztecus species group (Rodentia: Muridae) inferred using parsimony and likelihood
-
Sullivan J, Markert JA, Kilpatrick CW. 1997. Phylogeography and molecular systematics of the Peromyscus aztecus species group (Rodentia: Muridae) inferred using parsimony and likelihood. Syst. Biol. 46:426-440. http://dx.doi.org/10.1093/sysbio/46.3.426.
-
(1997)
Syst. Biol.
, vol.46
, pp. 426-440
-
-
Sullivan, J.1
Markert, J.A.2
Kilpatrick, C.W.3
-
43
-
-
0001336205
-
Phylogenetic inference
-
Hillis DM, Moritz C ed, Sinauer Associates, Sunderland, MA
-
Swofford DL, Olsen GJ, Waddell PJ, Hillis DM. 1996. Phylogenetic inference, p 407-514. In Hillis DM, Moritz C (ed), Molecular systematics. Sinauer Associates, Sunderland, MA.
-
(1996)
Molecular Systematics
, pp. 407-514
-
-
Swofford, D.L.1
Olsen, G.J.2
Waddell, P.J.3
Hillis, D.M.4
-
44
-
-
0029469716
-
Maximum-likelihood trees from DNA-sequences-A peculiar statistical estimation problem
-
Yang Z, Goldman N, Friday A. 1995. Maximum-likelihood trees from DNA-sequences-a peculiar statistical estimation problem. Syst. Biol. 44:384-399. http://dx.doi.org/10.1093/sysbio/44.3.384.
-
(1995)
Syst. Biol.
, vol.44
, pp. 384-399
-
-
Yang, Z.1
Goldman, N.2
Friday, A.3
-
46
-
-
0000461280
-
Confidence-limits on phylogenies-an approach using the bootstrap
-
Felsenstein J. 1985. Confidence-limits on phylogenies-an approach using the bootstrap. Evolution 39:783-791. http://dx.doi.org/10.2307/2408678.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
47
-
-
84889972857
-
Expanding the reach of grid computing: Combining Globus- and BOINC-based systems
-
Talbi EG, Zomaya A ed, John Wiley & Sons, New York, NY
-
Myers DS, Bazinet AL, Cummings MP. 2008. Expanding the reach of grid computing: combining Globus- and BOINC-based systems, p 71-85. In Talbi EG, Zomaya A (ed), Grids for bioinformatics and computational biology. Wiley book series on parallel and distributed computing. John Wiley & Sons, New York, NY.
-
(2008)
Grids for Bioinformatics and Computational Biology. Wiley Book Series on Parallel and Distributed Computing
, pp. 71-85
-
-
Myers, D.S.1
Bazinet, A.L.2
Cummings, M.P.3
-
48
-
-
0042101429
-
Necessity is the mother of invention: A simple grid computing system using commodity tools
-
Myers DS, Cummings MP. 2003. Necessity is the mother of invention: a simple grid computing system using commodity tools. J. Parallel Distrib. Comput. 63:578-589. http://dx.doi.org/10.1016/S0743-7315 (03) 00004-2.
-
(2003)
J. Parallel Distrib. Comput.
, vol.63
, pp. 578-589
-
-
Myers, D.S.1
Cummings, M.P.2
-
49
-
-
0042069655
-
Comparing bootstrap and posterior probability values in the four-taxon case
-
Cummings MP, Handley SA, Myers DS, Reed DL, Rokas A, Winka K. 2003. Comparing bootstrap and posterior probability values in the four-taxon case. Syst. Biol. 52:477-487. http://dx.doi.org/10.1080/10635150390218213.
-
(2003)
Syst. Biol.
, vol.52
, pp. 477-487
-
-
Cummings, M.P.1
Handley, S.A.2
Myers, D.S.3
Reed, D.L.4
Rokas, A.5
Winka, K.6
-
50
-
-
84989432221
-
Testing significance of incongruence
-
Farris JS, Kallersjo M, Kluge AG, Bult C. 1994. Testing significance of incongruence. Cladistics 10:315-319. http://dx.doi.org/10.1111/j.1096-0031.1994. tb00181.x.
-
(1994)
Cladistics
, vol.10
, pp. 315-319
-
-
Farris, J.S.1
Kallersjo, M.2
Kluge, A.G.3
Bult, C.4
-
51
-
-
0003512608
-
-
version 0.9.9. K. C. Nixon, Ithaca, NY
-
Nixon KC. 1999. Winclada (beta), version 0.9.9. K. C. Nixon, Ithaca, NY.
-
(1999)
Winclada (Beta)
-
-
Nixon, K.C.1
-
52
-
-
0036375811
-
Detection of recombination among Salmonella enterica strains using the incongruence length difference test
-
Brown EW, Kotewicz ML, Cebula TA. 2002. Detection of recombination among Salmonella enterica strains using the incongruence length difference test. Mol. Phylogenet. Evol. 24:102-120. http://dx.doi.org/10.1016/S1055-7903 (02) 00222-1.
-
(2002)
Mol. Phylogenet. Evol.
, vol.24
, pp. 102-120
-
-
Brown, E.W.1
Kotewicz, M.L.2
Cebula, T.A.3
-
53
-
-
35348839697
-
Multiplex, bead-based suspension array for molecular determination of common Salmonella serogroups
-
Fitzgerald C, Collins M, van Duyne S, Mikoleit M, Brown T, Fields P. 2007. Multiplex, bead-based suspension array for molecular determination of common Salmonella serogroups. J. Clin. Microbiol. 45:3323-3334. http://dx.doi.org/10.1128/JCM.00025-07.
-
(2007)
J. Clin. Microbiol.
, vol.45
, pp. 3323-3334
-
-
Fitzgerald, C.1
Collins, M.2
Van Duyne, S.3
Mikoleit, M.4
Brown, T.5
Fields, P.6
-
54
-
-
79951486830
-
Molecular determination of H antigens of Salmonella by use of a microspherebased liquid array
-
McQuiston JR, Waters RJ, Dinsmore BA, Mikoleit ML, Fields PI. 2011. Molecular determination of H antigens of Salmonella by use of a microspherebased liquid array. J. Clin. Microbiol. 49:565-573. http://dx.doi.org/10.1128/JCM. 01323-10.
-
(2011)
J. Clin. Microbiol.
, vol.49
, pp. 565-573
-
-
McQuiston, J.R.1
Waters, R.J.2
Dinsmore, B.A.3
Mikoleit, M.L.4
Fields, P.I.5
-
55
-
-
0033000468
-
Salmonella enteritidis phage types 1 and 4: Pheno- and genotypic epidemiology of recent outbreaks in Finland
-
Lukinmaa S, Schildt R, Rinttila T, Siitonen A. 1999. Salmonella enteritidis phage types 1 and 4: pheno- and genotypic epidemiology of recent outbreaks in Finland. J. Clin. Microbiol. 37:2176-2182.
-
(1999)
J. Clin. Microbiol.
, vol.37
, pp. 2176-2182
-
-
Lukinmaa, S.1
Schildt, R.2
Rinttila, T.3
Siitonen, A.4
-
56
-
-
33845411075
-
Salmonella Enteritidis in broiler chickens, United States, 2000-2005
-
Altekruse SF, Bauer N, Chanlongbutra A, DeSagun R, Naugle A, Schlosser W, Umholtz R, White P. 2006. Salmonella Enteritidis in broiler chickens, United States, 2000-2005. Emerg. Infect. Dis. 12:1848-1852. http://dx.doi.org/10.3201/ eid1212.060653.
-
(2006)
Emerg. Infect. Dis.
, vol.12
, pp. 1848-1852
-
-
Altekruse, S.F.1
Bauer, N.2
Chanlongbutra, A.3
DeSagun, R.4
Naugle, A.5
Schlosser, W.6
Umholtz, R.7
White, P.8
-
57
-
-
71749084424
-
Genotypic and phenotypic diversity of Salmonella Enteritidis isolated from chickens and humans in Korea
-
Kang ZW, Jung JH, Kim SH, Lee BK, Lee DY, Kim YJ, Lee JY, Won HK, Kim EH, Hahn TW. 2009. Genotypic and phenotypic diversity of Salmonella Enteritidis isolated from chickens and humans in Korea. J. Vet. Med. Sci. 71:1433-1438. http://dx.doi.org/10.1292/jvms.001433.
-
(2009)
J. Vet. Med. Sci.
, vol.71
, pp. 1433-1438
-
-
Kang, Z.W.1
Jung, J.H.2
Kim, S.H.3
Lee, B.K.4
Lee, D.Y.5
Kim, Y.J.6
Lee, J.Y.7
Won, H.K.8
Kim, E.H.9
Hahn, T.W.10
-
58
-
-
0002711937
-
Epidemiology of Salmonella enterica serovar Enteritidis phage type 4 in England and Wales
-
Saeed AM, Gaste RE, Potter ME, Wall PG ed, Iowa State University Press, Ames, IA
-
Wall PG, Ward LR. 1999. Epidemiology of Salmonella enterica serovar Enteritidis phage type 4 in England and Wales, p 19-25. In Saeed AM, Gaste RE, Potter ME, Wall PG (ed), Salmonella enterica serovar Enteritidis in humans and animals: epidemiology, pathogenesis, and control. Iowa State University Press, Ames, IA.
-
(1999)
Salmonella Enterica Serovar Enteritidis in Humans and Animals: Epidemiology, Pathogenesis, and Control
, pp. 19-25
-
-
Wall, P.G.1
Ward, L.R.2
-
59
-
-
0011080073
-
Salmonella enterica serovar Enteritidis in France
-
Saeed AM, Gaste RE, Potter ME, Wall PG ed, Iowa State University Press, Ames, IA
-
Grimont P A D, Bouvet P, Grimont F, Desenclos J-C. 1999. Salmonella enterica serovar Enteritidis in France, p 43-49. In Saeed AM, Gaste RE, Potter ME, Wall PG (ed), Salmonella enterica serovar Enteritidis in humans and animals: epidemiology, pathogenesis, and control. Iowa State University Press, Ames, IA.
-
(1999)
Salmonella Enterica Serovar Enteritidis in Humans and Animals: Epidemiology, Pathogenesis, and Control
, pp. 43-49
-
-
Grimont, P.A.D.1
Bouvet, P.2
Grimont, F.3
Desenclos, J.-C.4
-
60
-
-
0001887980
-
Ups and downs of Salmonella enterica serovar Enteritidis in Germany
-
Saeed AM, Gaste RE, Potter ME, Wall PG ed, Iowa State University Press, Ames, IA
-
Tschape H, Liesegang A, Gericke B, Prager R, Rabsch W, Helmuth R. 1999. Ups and downs of Salmonella enterica serovar Enteritidis in Germany, p 51-61. In Saeed AM, Gaste RE, Potter ME, Wall PG (ed), Salmonella enterica serovar Enteritidis in humans and animals: epidemiology, pathogenesis, and control. Iowa State University Press, Ames, IA.
-
(1999)
Salmonella Enterica Serovar Enteritidis in Humans and Animals: Epidemiology, Pathogenesis, and Control
, pp. 51-61
-
-
Tschape, H.1
Liesegang, A.2
Gericke, B.3
Prager, R.4
Rabsch, W.5
Helmuth, R.6
-
61
-
-
0003080168
-
Salmonella enterica serovar Enteritidis in Denmark
-
Saeed AM, Gaste RE, Potter ME, Wall PG ed, Iowa State University Press, Ames, IA
-
Gerner-Smidt P, Wegener HC. 1999. Salmonella enterica serovar Enteritidis in Denmark, p 63-69. In Saeed AM, Gaste RE, Potter ME, Wall PG (ed), Salmonella enterica serovar Enteritidis in humans and animals: epidemiology, pathogenesis, and control. Iowa State University Press, Ames, IA.
-
(1999)
Salmonella Enterica Serovar Enteritidis in Humans and Animals: Epidemiology, Pathogenesis, and Control
, pp. 63-69
-
-
Gerner-Smidt, P.1
Wegener, H.C.2
-
62
-
-
0002001283
-
Epidemiology of human Salmonella enterica serovar Enteritidis infections in the United States
-
Saeed AM, Gaste RE, Potter ME, Wall PG ed, Iowa State University Press, Ames, IA
-
Angulo FJ, Swerdlow DL. 1999. Epidemiology of human Salmonella enterica serovar Enteritidis infections in the United States, p 33-41. In Saeed AM, Gaste RE, Potter ME, Wall PG (ed), Salmonella enterica serovar Enteritidis in humans and animals: epidemiology, pathogenesis, and control. Iowa State University Press, Ames, IA.
-
(1999)
Salmonella Enterica Serovar Enteritidis in Humans and Animals: Epidemiology, Pathogenesis, and Control
, pp. 33-41
-
-
Angulo, F.J.1
Swerdlow, D.L.2
-
63
-
-
11144354606
-
Chicken consumption is a newly identified risk factor for sporadic Salmonella enterica serotype Enteritidis infections in the United States: A case-control study in FoodNet sites
-
Emerging Infections Program FoodNet Working Group
-
Kimura AC, Reddy V, Marcus R, Cieslak PR, Mohle-Boetani JC, Kassenborg HD, Segler SD, Hardnett FP, Barrett T, Swerdlow DL, Emerging Infections Program FoodNet Working Group. 2004. Chicken consumption is a newly identified risk factor for sporadic Salmonella enterica serotype Enteritidis infections in the United States: a case-control study in FoodNet sites. Clin. Infect. Dis. 38:S244-S252. http://dx.doi.org/10.1086/381576.
-
(2004)
Clin. Infect. Dis.
, vol.38
-
-
Kimura, A.C.1
Reddy, V.2
Marcus, R.3
Cieslak, P.R.4
Mohle-Boetani, J.C.5
Kassenborg, H.D.6
Segler, S.D.7
Hardnett, F.P.8
Barrett, T.9
Swerdlow, D.L.10
-
64
-
-
0028040185
-
Molecular subtyping of Salmonella enteritidis phage type 8 strains from the United States
-
Usera MA, Popovic T, Bopp CA, Strockbine NA. 1994. Molecular subtyping of Salmonella enteritidis phage type 8 strains from the United States. J. Clin. Microbiol. 32:194-198.
-
(1994)
J. Clin. Microbiol.
, vol.32
, pp. 194-198
-
-
Usera, M.A.1
Popovic, T.2
Bopp, C.A.3
Strockbine, N.A.4
-
65
-
-
77954526425
-
Limited genetic diversity and gene expression differences between egg- and noneggrelated Salmonella Enteritidis strains
-
Botteldoorn N, Van Coillie E, Goris J, Werbrouck H, Piessens V, Godard C, Scheldeman P, Herman L, Heyndrickx M. 2010. Limited genetic diversity and gene expression differences between egg- and noneggrelated Salmonella Enteritidis strains. Zoonoses Public Health 57:345-357. http://dx.doi.org/10.1111/j.1863- 2378.2008.01216.x.
-
(2010)
Zoonoses Public Health
, vol.57
, pp. 345-357
-
-
Botteldoorn, N.1
Van Coillie, E.2
Goris, J.3
Werbrouck, H.4
Piessens, V.5
Godard, C.6
Scheldeman, P.7
Herman, L.8
Heyndrickx, M.9
-
66
-
-
1342331102
-
DISTRUCT: A program for the graphical display of population structure
-
Rosenberg NA. 2004. DISTRUCT: a program for the graphical display of population structure. Mol. Ecol. Notes 4:137-138. http://dx.doi.org/10.1046/j. 1471-8286.2003.00566.x.
-
(2004)
Mol. Ecol. Notes
, vol.4
, pp. 137-138
-
-
Rosenberg, N.A.1
|