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Volumn , Issue , 2007, Pages 71-85

Expanding the Reach of Grid Computing: Combining Globus- and BOINC-Based Systems

Author keywords

Application programming interface (API); Grid computing systems and grid security infrastructure (GSI); Portable batch system (PBS)

Indexed keywords


EID: 84889972857     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1002/9780470191637.ch4     Document Type: Chapter
Times cited : (40)

References (39)
  • 1
    • 3042671610 scopus 로고    scopus 로고
    • Characterizing grids: Attributes, definitions, and formalisms
    • Z. Németh, V. Sunderam, Characterizing grids: Attributes, definitions, and formalisms, Journal of Grid Computing 1, 9-25, 2003.
    • (2003) Journal of Grid Computing , vol.1 , pp. 9-25
    • Németh, Z.1    Sunderam, V.2
  • 5
    • 0042101429 scopus 로고    scopus 로고
    • Necessity is the mother of invention: A simple Grid computing system using commodity tools
    • D.S. Myers, M.P. Cummings, Necessity is the mother of invention: A simple Grid computing system using commodity tools, Journal of Parallel Distributed Computing 63, 578-589, 2003.
    • (2003) Journal of Parallel Distributed Computing , vol.63 , pp. 578-589
    • Myers, D.S.1    Cummings, M.P.2
  • 6
    • 0010525040 scopus 로고    scopus 로고
    • Folding@Home and Genome@Home: using distributed computing to tackle previously intractable problems in computational biology
    • in: R. Grant (Ed.), Horizon Scientific Press, Norfolk, VA
    • S.M. Larson, C.D. Snow, M. Shirts, V.S. Pande, Folding@Home and Genome@Home: using distributed computing to tackle previously intractable problems in computational biology, in: R. Grant (Ed.), Computational Genomics: Theory and Applications, Horizon Scientific Press, Norfolk, VA, 2004.
    • (2004) Computational Genomics: Theory and Applications
    • Larson, S.M.1    Snow, C.D.2    Shirts, M.3    Pande, V.S.4
  • 7
    • 84889988365 scopus 로고    scopus 로고
    • http://fightaidsathome.scripps.edu/.
  • 9
    • 0000252022 scopus 로고    scopus 로고
    • Globus: A toolkit-based Grid architecture
    • in I. Foster, C. Kesselman (Eds.), Morgan Kaufmann, Los Altos, CA
    • I. Foster, C. Kesselman, Globus: A toolkit-based Grid architecture, in I. Foster, C. Kesselman (Eds.), The Grid: Blueprint for a New Computing Infrastructure, Morgan Kaufmann, Los Altos, CA, 1999.
    • (1999) The Grid: Blueprint for a New Computing Infrastructure
    • Foster, I.1    Kesselman, C.2
  • 10
    • 84889970641 scopus 로고    scopus 로고
    • http://boinc.berkeley.edu/.
  • 11
    • 11244334918 scopus 로고    scopus 로고
    • Public computing: Reconnecting people to science
    • Conference on Shared Knowledge and the Web, Residencia de Estudiantes, Madrid, Spain, November 17-19
    • D.P. Anderson, Public computing: Reconnecting people to science, Conference on Shared Knowledge and the Web, Residencia de Estudiantes, Madrid, Spain, November 17-19, 2003.
    • (2003)
    • Anderson, D.P.1
  • 13
    • 72949090454 scopus 로고    scopus 로고
    • The Lattice Project: A grid research and production environment combining multiple grid computing models
    • in M.H.W. Weber (Ed.), Principles, Applications and Supporting Communities, Tectum (to appear)
    • A.L. Bazinet, M.P. Cummings, The Lattice Project: A grid research and production environment combining multiple grid computing models, in M.H.W. Weber (Ed.), Distributed & Grid Computing-Science Made Transparent for Everyone, Principles, Applications and Supporting Communities, Tectum (to appear).
    • Distributed & Grid Computing-Science Made Transparent for Everyone
    • Bazinet, A.L.1    Cummings, M.P.2
  • 14
    • 84890000217 scopus 로고    scopus 로고
    • Portable Batch Systems
    • Altair Engineering, Portable Batch Systems, http://www.openpbs.org/
    • Engineering, A.1
  • 15
    • 0033990061 scopus 로고    scopus 로고
    • Flexible sequence similarity searching with the FASTA3 program package
    • W.R. Pearson, Flexible sequence similarity searching with the FASTA3 program package, Methods of Molecular Biology 132, 185-219, 2000.
    • (2000) Methods of Molecular Biology , vol.132 , pp. 185-219
    • Pearson, W.R.1
  • 16
  • 18
    • 84889966555 scopus 로고    scopus 로고
    • Intercepting arbitrary functions on Windows
    • UNIX, and Macintosh OS X platforms, Center for Bioinformatics and Computational Biology, Institute for Advanced Computer Studies, University of Maryland, CS-TR-4585, UMIACS-TR-2004-28
    • D.S. Myers, A.L. Bazinet, Intercepting arbitrary functions on Windows, UNIX, and Macintosh OS X platforms, Center for Bioinformatics and Computational Biology, Institute for Advanced Computer Studies, University of Maryland, CS-TR-4585, UMIACS-TR-2004-28, 2004.
    • (2004)
    • Myers, D.S.1    Bazinet, A.L.2
  • 19
    • 33750843754 scopus 로고    scopus 로고
    • Grid services base library: A high-level, procedural application programing interface for writing Globus-based grid services
    • A.L. Bazinet, D.S. Myers, J. Fuetsch, M.P. Cummings, Grid services base library: A high-level, procedural application programing interface for writing Globus-based grid services, Future Generation Computer Systems 23, 517-522, 2007.
    • (2007) Future Generation Computer Systems , vol.23 , pp. 517-522
    • Bazinet, A.L.1    Myers, D.S.2    Fuetsch, J.3    Cummings, M.P.4
  • 20
    • 0027968068 scopus 로고
    • ClustalW: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • J.D. Thompson, D.G. Higgins,T.J. Gibson, ClustalW: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic Acids Research 22, 4673-4680, 1994.
    • (1994) Nucleic Acids Research , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 22
    • 3142714474 scopus 로고    scopus 로고
    • Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis
    • J. Hey, R. Nielsen, Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis, Genetics 167, 747-760, 2004.
    • (2004) Genetics , vol.167 , pp. 747-760
    • Hey, J.1    Nielsen, R.2
  • 23
    • 0029027992 scopus 로고
    • Estimating effective population size and mutation rate from sequence data using Metropolis-Hastings sampling
    • M.K. Kuhner, J. Yamato, J. Felsenstein, Estimating effective population size and mutation rate from sequence data using Metropolis-Hastings sampling, Genetics 140, 1421-1430, 1995.
    • (1995) Genetics , vol.140 , pp. 1421-1430
    • Kuhner, M.K.1    Yamato, J.2    Felsenstein, J.3
  • 24
    • 0031835126 scopus 로고    scopus 로고
    • Maximum likelihood estimates of population growth rates based on the coalescent
    • M.K. Kuhner, J. Yamato, J. Felsenstein, Maximum likelihood estimates of population growth rates based on the coalescent, Genetics 149, 429-434, 1998.
    • (1998) Genetics , vol.149 , pp. 429-434
    • Kuhner, M.K.1    Yamato, J.2    Felsenstein, J.3
  • 25
    • 0033756316 scopus 로고    scopus 로고
    • Maximum likelihood estimation of recombination rates from population data
    • M.K. Kuhner, J. Yamato, J. Felsenstein, Maximum likelihood estimation of recombination rates from population data, Genetics 156, 1393-1401, 2000.
    • (2000) Genetics , vol.156 , pp. 1393-1401
    • Kuhner, M.K.1    Yamato, J.2    Felsenstein, J.3
  • 26
    • 0034967295 scopus 로고    scopus 로고
    • Distinguishing migration from isolation. A Markov chain Monte Carlo approach
    • R. Nielsen, J. Wakeley, Distinguishing migration from isolation. A Markov chain Monte Carlo approach, Genetics 158, 885-896, 2001.
    • (2001) Genetics , vol.158 , pp. 885-896
    • Nielsen, R.1    Wakeley, J.2
  • 27
    • 0032979748 scopus 로고    scopus 로고
    • Maximum likelihood estimation of migration rates and effective population numbers in two populations using a coalescent approach
    • P. Beerli, J. Felsenstein, Maximum likelihood estimation of migration rates and effective population numbers in two populations using a coalescent approach, Genetics 152, 763-773, 1999.
    • (1999) Genetics , vol.152 , pp. 763-773
    • Beerli, P.1    Felsenstein, J.2
  • 28
    • 0035836728 scopus 로고    scopus 로고
    • Maximum likelihood estimation of a migration matrix and effective populations sizes in n subpopulations by using a coalescent approach
    • P. Beerli, J. Felsenstein, Maximum likelihood estimation of a migration matrix and effective populations sizes in n subpopulations by using a coalescent approach, Proceedings of the National Academy of Science of the United States of America 98, 4563-4568, 2001.
    • (2001) Proceedings of the National Academy of Science of the United States of America , vol.98 , pp. 4563-4568
    • Beerli, P.1    Felsenstein, J.2
  • 29
    • 0031773680 scopus 로고    scopus 로고
    • Modeltest: Testing the model of DNA substitution
    • D. Posada, K.A. Crandall, Modeltest: Testing the model of DNA substitution, Bioinformatics 14, 817-818, 1998.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 30
    • 0003474197 scopus 로고    scopus 로고
    • PAUP*: Phylogenetic analysis using parsimony (*and other methods), version 4
    • Sinauer Associates, Sunderland, MA
    • D.L. Swofford, PAUP*: Phylogenetic analysis using parsimony (*and other methods), version 4, Sinauer Associates, Sunderland, MA, 2003.
    • (2003)
    • Swofford, D.L.1
  • 31
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • F. Ronquist, J.P. Huelsenbeck, MrBayes 3: Bayesian phylogenetic inference under mixed models, Bioinformatics 19, 1572-1574, 2003.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 32
    • 0036184745 scopus 로고    scopus 로고
    • Generating samples under a Wright-Fisher neutral model of genetic variation
    • R.R. Hudson, Generating samples under a Wright-Fisher neutral model of genetic variation, Bioinformatics 18, 337-338, 2002.
    • (2002) Bioinformatics , vol.18 , pp. 337-338
    • Hudson, R.R.1
  • 33
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput
    • R.C. Edgar, MUSCLE: multiple sequence alignment with high accuracy and high throughput, Nucleic Acids Research 32, 1792-1797, 2004.
    • (2004) Nucleic Acids Research , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 34
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • S. Guindon, O. Gascuel, A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood, Systematic Biology 52, 696-704, 2003.
    • (2003) Systematic Biology , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 35
    • 0033524952 scopus 로고    scopus 로고
    • A dynamic programming algorithm for RNA structure prediction including pseudoknots
    • E. Rivas, S.R. Eddy, A dynamic programming algorithm for RNA structure prediction including pseudoknots, Journal of Molecular Biology 285, 2053-2068, 1999.
    • (1999) Journal of Molecular Biology , vol.285 , pp. 2053-2068
    • Rivas, E.1    Eddy, S.R.2
  • 36
    • 0030928378 scopus 로고    scopus 로고
    • Seq-Gen: An application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees
    • A. Rambaut, N.C. Grassly, Seq-Gen: An application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees, Computer Applications in the Biosciences, 13, 235-238, 1997.
    • (1997) Computer Applications in the Biosciences , vol.13 , pp. 235-238
    • Rambaut, A.1    Grassly, N.C.2
  • 37
    • 0033886350 scopus 로고    scopus 로고
    • A new statistic for detecting genetic differentiation
    • R.R. Hudson, A new statistic for detecting genetic differentiation, Genetics 155, 2011-2014, 2000.
    • (2000) Genetics , vol.155 , pp. 2011-2014
    • Hudson, R.R.1
  • 38
    • 20444391345 scopus 로고    scopus 로고
    • Structural determinants for selective recognition of a Lys48-linked polyubiquitin chain by a UBA domain
    • R. Varadan, M. Assfalg, S. Raasi, C. Pickart, D. Fushman, Structural determinants for selective recognition of a Lys48-linked polyubiquitin chain by a UBA domain, Molecules and Cells 18, 687-698, 2005.
    • (2005) Molecules and Cells , vol.18 , pp. 687-698
    • Varadan, R.1    Assfalg, M.2    Raasi, S.3    Pickart, C.4    Fushman, D.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.