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Volumn 289, Issue 16, 2014, Pages 11342-11352

Organization of ribosomes and nucleoids in escherichia coli cells during growth and in quiescence

Author keywords

[No Author keywords available]

Indexed keywords

ESCHERICHIA COLI;

EID: 84898985090     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M114.557348     Document Type: Article
Times cited : (76)

References (53)
  • 1
    • 0032489015 scopus 로고    scopus 로고
    • The cell as a collection of protein machines. Preparing the next generation of molecular biologists
    • Alberts, B. (1998) The cell as a collection of protein machines. Preparing the next generation of molecular biologists. Cell 92, 291-294
    • (1998) Cell , vol.92 , pp. 291-294
    • Alberts, B.1
  • 2
    • 0034671792 scopus 로고    scopus 로고
    • Global analysis of the genetic network controlling a bacterial cell cycle
    • Laub, M. T., McAdams, H. H., Feldblyum, T., Fraser, C. M., and Shapiro, L. (2000) Global analysis of the genetic network controlling a bacterial cell cycle. Science 290, 2144-2148
    • (2000) Science , vol.290 , pp. 2144-2148
    • Laub, M.T.1    McAdams, H.H.2    Feldblyum, T.3    Fraser, C.M.4    Shapiro, L.5
  • 4
    • 0034109064 scopus 로고    scopus 로고
    • Plasmid r1 is present as clusters in the cells of escherichia coli
    • Weitao, T., Dasgupta, S., and Nordström, K. (2000) Plasmid R1 is present as clusters in the cells of Escherichia coli. Plasmid 43, 200-204
    • (2000) Plasmid , vol.43 , pp. 200-204
    • Weitao, T.1    Dasgupta, S.2    Nordström, K.3
  • 5
  • 6
    • 0033753457 scopus 로고    scopus 로고
    • Role of the mukb gene in chromosome and plasmid partition in escherichia coli
    • Weitao, T., Dasgupta, S., and Nordström, K. (2000) Role of the mukB gene in chromosome and plasmid partition in Escherichia coli. Mol. Microbiol. 38, 392-400
    • (2000) Mol. Microbiol. , vol.38 , pp. 392-400
    • Weitao, T.1    Dasgupta, S.2    Nordström, K.3
  • 7
    • 0034511875 scopus 로고    scopus 로고
    • Dynamic localization of bacterial and plasmid chromosomes
    • Hiraga, S. (2000) Dynamic localization of bacterial and plasmid chromosomes. Annu. Rev. Genet. 34, 21-59
    • (2000) Annu. Rev. Genet. , vol.34 , pp. 21-59
    • Hiraga, S.1
  • 8
    • 0041853574 scopus 로고    scopus 로고
    • Bacterial chromosome dynamics
    • Sherratt, D. J. (2003) Bacterial chromosome dynamics. Science 301, 780-785
    • (2003) Science , vol.301 , pp. 780-785
    • Sherratt, D.J.1
  • 9
    • 3042548402 scopus 로고    scopus 로고
    • Rapid and sequential movement of individual chromosomal loci to specific subcellular locations during bacterial dna replication
    • Viollier, P. H., Thanbichler, M., McGrath, P. T., West, L., Meewan, M., McAdams, H. H., and Shapiro, L. (2004) Rapid and sequential movement of individual chromosomal loci to specific subcellular locations during bacterial DNA replication. Proc. Natl. Acad. Sci. U.S.A. 101, 9257-9262
    • (2004) Proc. Natl. Acad. Sci. U.S.A. , vol.101 , pp. 9257-9262
    • Viollier, P.H.1    Thanbichler, M.2    McGrath, P.T.3    West, L.4    Meewan, M.5    McAdams, H.H.6    Shapiro, L.7
  • 10
    • 78650078263 scopus 로고    scopus 로고
    • Ftsz in bacterial cytokinesis. Cytoskeleton and force generator all in one
    • Erickson, H. P., Anderson, D. E., and Osawa, M. (2010) FtsZ in bacterial cytokinesis. Cytoskeleton and force generator all in one. Microbiol. Mol. Biol. Rev. 74, 504-528
    • (2010) Microbiol. Mol. Biol. Rev. , vol.74 , pp. 504-528
    • Erickson, H.P.1    Anderson, D.E.2    Osawa, M.3
  • 11
    • 0346020436 scopus 로고    scopus 로고
    • The bacterial cytoskeleton. An intermediate filament-like function in cell shape
    • Ausmees, N., Kuhn, J. R., and Jacobs-Wagner, C. (2003) The bacterial cytoskeleton. An intermediate filament-like function in cell shape. Cell 115, 705-713
    • (2003) Cell , vol.115 , pp. 705-713
    • Ausmees, N.1    Kuhn, J.R.2    Jacobs-Wagner, C.3
  • 12
    • 0035937396 scopus 로고    scopus 로고
    • Control of cell shape in bacteria. Helical, actin-like filaments in bacillus subtilis
    • Jones, L. J., Carballido-López, R., and Errington, J. (2001) Control of cell shape in bacteria. Helical, actin-like filaments in Bacillus subtilis. Cell 104, 913-922
    • (2001) Cell , vol.104 , pp. 913-922
    • Jones, L.J.1    Carballido-López, R.2    Errington, J.3
  • 13
    • 0032553470 scopus 로고    scopus 로고
    • Localization of bacterial dna polymerase. Evidence for a factory model of replication
    • Lemon, K. P., and Grossman, A. D. (1998) Localization of bacterial DNA polymerase. Evidence for a factory model of replication. Science 282, 1516-1519
    • (1998) Science , vol.282 , pp. 1516-1519
    • Lemon, K.P.1    Grossman, A.D.2
  • 14
    • 77951537332 scopus 로고    scopus 로고
    • Stoichiometry and architecture of active dna replication machinery in escherichia coli
    • Reyes-Lamothe, R., Sherratt, D. J., and Leake, M. C. (2010) Stoichiometry and architecture of active DNA replication machinery in Escherichia coli. Science 328, 498-501
    • (2010) Science , vol.328 , pp. 498-501
    • Reyes-Lamothe, R.1    Sherratt, D.J.2    Leake, M.C.3
  • 15
    • 0034651795 scopus 로고    scopus 로고
    • Compartmentalization of transcription and translation in bacillus subtilis
    • Lewis, P. J., Thaker, S. D., and Errington, J. (2000) Compartmentalization of transcription and translation in Bacillus subtilis. EMBO J. 19, 710-718
    • (2000) EMBO J. , vol.19 , pp. 710-718
    • Lewis, P.J.1    Thaker, S.D.2    Errington, J.3
  • 16
    • 0034859439 scopus 로고    scopus 로고
    • Specific polar localization of ribosomes in bacillus subtilis depends on active transcription
    • Mascarenhas, J., Weber, M. H., and Graumann, P. L. (2001) Specific polar localization of ribosomes in Bacillus subtilis depends on active transcription. EMBO Rep. 2, 685-689
    • (2001) EMBO Rep. , vol.2 , pp. 685-689
    • Mascarenhas, J.1    Weber, M.H.2    Graumann, P.L.3
  • 17
    • 84862765893 scopus 로고    scopus 로고
    • Superresolution imaging of ribosomes and rna polymerase in live escherichia coli cells
    • Bakshi, S., Siryaporn, A., Goulian, M., and Weisshaar, J. C. (2012) Superresolution imaging of ribosomes and RNA polymerase in live Escherichia coli cells. Mol. Microbiol. 85, 21-38
    • (2012) Mol. Microbiol. , vol.85 , pp. 21-38
    • Bakshi, S.1    Siryaporn, A.2    Goulian, M.3    Weisshaar, J.C.4
  • 18
    • 0346887121 scopus 로고    scopus 로고
    • The distribution of rna polymerase in escherichia coli is dynamic and sensitive to environmental cues
    • Cabrera, J. E., and Jin, D. J. (2003) The distribution of RNA polymerase in Escherichia coli is dynamic and sensitive to environmental cues. Mol. Microbiol. 50, 1493-1505
    • (2003) Mol. Microbiol. , vol.50 , pp. 1493-1505
    • Cabrera, J.E.1    Jin, D.J.2
  • 19
    • 3843126332 scopus 로고    scopus 로고
    • Rna dynamics in live escherichia coli cells
    • Golding, I., and Cox, E. C. (2004) RNA dynamics in live Escherichia coli cells. Proc. Natl. Acad. Sci. U.S.A. 101, 11310-11315
    • (2004) Proc. Natl. Acad. Sci. U.S.A. , vol.101 , pp. 11310-11315
    • Golding, I.1    Cox, E.C.2
  • 20
    • 34548630230 scopus 로고    scopus 로고
    • Assembly dynamics of the bacterial mincde system and spatial regulation of the z ring
    • Lutkenhaus, J. (2007) Assembly dynamics of the bacterial MinCDE system and spatial regulation of the Z ring. Annu. Rev. Biochem. 76, 539-562
    • (2007) Annu. Rev. Biochem. , vol.76 , pp. 539-562
    • Lutkenhaus, J.1
  • 21
    • 0033609139 scopus 로고    scopus 로고
    • Rapid pole-To-pole oscillation of a protein required for directing division to the middle of escherichia coli
    • Raskin, D. M., and de Boer, P. A. (1999) Rapid pole-To-pole oscillation of a protein required for directing division to the middle of Escherichia coli. Proc. Natl. Acad. Sci. U.S.A. 96, 4971-4976
    • (1999) Proc. Natl. Acad. Sci. U.S.A. , vol.96 , pp. 4971-4976
    • Raskin, D.M.1    De Boer, P.A.2
  • 22
    • 0014960630 scopus 로고
    • Visualization of bacterial genes in action
    • Miller, O. L., Jr., Hamkalo, B. A., and Thomas, C. A., Jr. (1970) Visualization of bacterial genes in action. Science 169, 392-395
    • (1970) Science , vol.169 , pp. 392-395
    • Miller Jr., O.L.1    Hamkalo, B.A.2    Thomas Jr., C.A.3
  • 24
    • 77951589688 scopus 로고    scopus 로고
    • Cooperation between translating ribosomes and rna polymerase in transcription elongation
    • Proshkin, S., Rahmouni, A. R., Mironov, A., and Nudler, E. (2010) Cooperation between translating ribosomes and RNA polymerase in transcription elongation. Science 328, 504-508
    • (2010) Science , vol.328 , pp. 504-508
    • Proshkin, S.1    Rahmouni, A.R.2    Mironov, A.3    Nudler, E.4
  • 25
    • 0036050398 scopus 로고    scopus 로고
    • The role of co-Transcriptional translation and protein translocation (transertion) in bacterial chromosome segregation
    • Woldringh, C. L. (2002) The role of co-Transcriptional translation and protein translocation (transertion) in bacterial chromosome segregation. Mol. Microbiol. 45, 17-29
    • (2002) Mol. Microbiol. , vol.45 , pp. 17-29
    • Woldringh, C.L.1
  • 26
    • 84877048279 scopus 로고    scopus 로고
    • Cellular organization of the transfer of genetic information
    • Campos, M., and Jacobs-Wagner, C. (2013) Cellular organization of the transfer of genetic information. Curr. Opin. Microbiol. 16, 171-176
    • (2013) Curr. Opin. Microbiol. , vol.16 , pp. 171-176
    • Campos, M.1    Jacobs-Wagner, C.2
  • 30
    • 0033869982 scopus 로고    scopus 로고
    • Two types of localization of the dna-binding proteins within the escherichia coli nucleoid
    • Azam, T. A., Hiraga, S., and Ishihama, A. (2000) Two types of localization of the DNA-binding proteins within the Escherichia coli nucleoid. Genes Cells 5, 613-626
    • (2000) Genes Cells , vol.5 , pp. 613-626
    • Azam, T.A.1    Hiraga, S.2    Ishihama, A.3
  • 32
    • 11144267737 scopus 로고    scopus 로고
    • Improved monomeric red, orange and yellow fluorescent proteins derived from discosoma sp. Red fluorescent protein
    • Shaner, N. C., Campbell, R. E., Steinbach, P. A., Giepmans, B. N., Palmer, A. E., and Tsien, R. Y. (2004) Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein. Nat. Biotechnol. 22, 1567-1572
    • (2004) Nat. Biotechnol. , vol.22 , pp. 1567-1572
    • Shaner, N.C.1    Campbell, R.E.2    Steinbach, P.A.3    Giepmans, B.N.4    Palmer, A.E.5    Tsien, R.Y.6
  • 33
    • 33747333128 scopus 로고    scopus 로고
    • A set of recombineering plasmids for gram-negative bacteria
    • Datta, S., Costantino, N., and Court, D. L. (2006) A set of recombineering plasmids for gram-negative bacteria. Gene 379, 109-115
    • (2006) Gene , vol.379 , pp. 109-115
    • Datta, S.1    Costantino, N.2    Court, D.L.3
  • 34
    • 59649098288 scopus 로고    scopus 로고
    • A single-step method for purification of active his-Tagged ribosomes from a genetically engineered escherichia coli
    • Ederth, J., Mandava, C. S., Dasgupta, S., and Sanyal, S. (2009) A single-step method for purification of active His-Tagged ribosomes from a genetically engineered Escherichia coli. Nucleic Acids Res. 37, e15
    • (2009) Nucleic Acids Res. , vol.37
    • Ederth, J.1    Mandava, C.S.2    Dasgupta, S.3    Sanyal, S.4
  • 35
    • 77953494296 scopus 로고    scopus 로고
    • Spatial resolution of two bacterial cell division proteins. Zapa recruits zapb to the inner face of the z-ring
    • Galli, E., and Gerdes, K. (2010) Spatial resolution of two bacterial cell division proteins. ZapA recruits ZapB to the inner face of the Z-ring. Mol. Microbiol. 76, 1514-1526
    • (2010) Mol. Microbiol. , vol.76 , pp. 1514-1526
    • Galli, E.1    Gerdes, K.2
  • 36
    • 0028799986 scopus 로고
    • Analysis of cell size and dna content in exponentially growing and stationary-phase batch cultures of escherichia coli
    • Akerlund, T., Nordström, K., and Bernander, R. (1995) Analysis of cell size and DNA content in exponentially growing and stationary-phase batch cultures of Escherichia coli. J. Bacteriol. 177, 6791-6797
    • (1995) J. Bacteriol. , vol.177 , pp. 6791-6797
    • Akerlund, T.1    Nordström, K.2    Bernander, R.3
  • 37
    • 70450233600 scopus 로고    scopus 로고
    • The a-z of bacterial translation inhibitors
    • Wilson, D. N. (2009) The A-Z of bacterial translation inhibitors. Crit. Rev. Biochem. Mol. Biol. 44, 393-433
    • (2009) Crit. Rev. Biochem. Mol. Biol. , vol.44 , pp. 393-433
    • Wilson, D.N.1
  • 38
    • 0015816131 scopus 로고
    • Effect of rifampin on the structure and membrane attachment of the nucleoid of escherichia coli
    • Dworsky, P., and Schaechter, M. (1973) Effect of rifampin on the structure and membrane attachment of the nucleoid of Escherichia coli. J. Bacteriol. 116, 1364-1374
    • (1973) J. Bacteriol. , vol.116 , pp. 1364-1374
    • Dworsky, P.1    Schaechter, M.2
  • 39
    • 67649394401 scopus 로고    scopus 로고
    • Active transcription of rrna operons condenses the nucleoid in escherichia coli. Examining the effect of transcription on nucleoid structure in the absence of transertion
    • Cabrera, J. E., Cagliero, C., Quan, S., Squires, C. L., and Jin, D. J. (2009) Active transcription of rRNA operons condenses the nucleoid in Escherichia coli. Examining the effect of transcription on nucleoid structure in the absence of transertion. J. Bacteriol. 191, 4180-4185
    • (2009) J. Bacteriol. , vol.191 , pp. 4180-4185
    • Cabrera, J.E.1    Cagliero, C.2    Quan, S.3    Squires, C.L.4    Jin, D.J.5
  • 40
    • 78651434674 scopus 로고    scopus 로고
    • The role of escherichia coli yrbb in the lethal action of quinolones
    • Han, X., Geng, J., Zhang, L., and Lu, T. (2011) The role of Escherichia coli YrbB in the lethal action of quinolones. J. Antimicrob. Chemother. 66, 323-331
    • (2011) J. Antimicrob. Chemother. , vol.66 , pp. 323-331
    • Han, X.1    Geng, J.2    Zhang, L.3    Lu, T.4
  • 42
    • 13544274210 scopus 로고    scopus 로고
    • Mreb actin-mediated segregation of a specific region of a bacterial chromosome
    • Gitai, Z., Dye, N. A., Reisenauer, A., Wachi, M., and Shapiro, L. (2005) MreB actin-mediated segregation of a specific region of a bacterial chromosome. Cell 120, 329-341
    • (2005) Cell , vol.120 , pp. 329-341
    • Gitai, Z.1    Dye, N.A.2    Reisenauer, A.3    Wachi, M.4    Shapiro, L.5
  • 43
    • 36549033450 scopus 로고    scopus 로고
    • Cell shape determination in escherichia coli
    • Osborn, M. J., and Rothfield, L. (2007) Cell shape determination in Escherichia coli. Curr. Opin. Microbiol. 10, 606-610
    • (2007) Curr. Opin. Microbiol. , vol.10 , pp. 606-610
    • Osborn, M.J.1    Rothfield, L.2
  • 44
    • 0141864658 scopus 로고    scopus 로고
    • Dysfunctional mreb inhibits chromosome segregation in escherichia coli
    • Kruse, T., Møller-Jensen, J., Løbner-Olesen, A., and Gerdes, K. (2003) Dysfunctional MreB inhibits chromosome segregation in Escherichia coli. EMBO J. 22, 5283-5292
    • (2003) EMBO J. , vol.22 , pp. 5283-5292
    • Kruse, T.1    Møller-Jensen, J.2    Løbner-Olesen, A.3    Gerdes, K.4
  • 45
    • 66649138900 scopus 로고    scopus 로고
    • A22 disrupts the bacterial actin cytoskeleton by directly binding and inducing a low-Affinity state in mreb
    • Bean, G. J., Flickinger, S. T., Westler, W. M., McCully, M. E., Sept, D., Weibel, D. B., and Amann, K. J. (2009) A22 disrupts the bacterial actin cytoskeleton by directly binding and inducing a low-Affinity state in MreB. Biochemistry 48, 4852-4857
    • (2009) Biochemistry , vol.48 , pp. 4852-4857
    • Bean, G.J.1    Flickinger, S.T.2    Westler, W.M.3    McCully, M.E.4    Sept, D.5    Weibel, D.B.6    Amann, K.J.7
  • 46
    • 85041133119 scopus 로고    scopus 로고
    • Association of escherichia coli ribosomes with the inner membrane requires the signal recognition particle receptor but is independent of the signal recognition particle
    • Herskovits, A. A., and Bibi, E. (2000) Association of Escherichia coli ribosomes with the inner membrane requires the signal recognition particle receptor but is independent of the signal recognition particle. Proc. Natl. Acad. Sci. U.S.A. 97, 4621-4626
    • (2000) Proc. Natl. Acad. Sci. U.S.A. , vol.97 , pp. 4621-4626
    • Herskovits, A.A.1    Bibi, E.2
  • 48
    • 80052565008 scopus 로고    scopus 로고
    • Random partitioning of molecules at cell division
    • Huh, D., and Paulsson, J. (2011) Random partitioning of molecules at cell division. Proc. Natl. Acad. Sci. U.S.A. 108, 15004-15009
    • (2011) Proc. Natl. Acad. Sci. U.S.A. , vol.108 , pp. 15004-15009
    • Huh, D.1    Paulsson, J.2
  • 49
    • 79251603722 scopus 로고    scopus 로고
    • Non-genetic heterogeneity from stochastic partitioning at cell division
    • Huh, D., and Paulsson, J. (2011) Non-genetic heterogeneity from stochastic partitioning at cell division. Nat. Genet. 43, 95-100
    • (2011) Nat. Genet. , vol.43 , pp. 95-100
    • Huh, D.1    Paulsson, J.2
  • 50
    • 79960325276 scopus 로고    scopus 로고
    • Entropy-based mechanism of ribosome-nucleoid segregation in E. Coli cells
    • Mondal, J., Bratton, B. P., Li, Y., Yethiraj, A., and Weisshaar, J. C. (2011) Entropy-based mechanism of ribosome-nucleoid segregation in E. coli cells. Biophys. J. 100, 2605-2613
    • (2011) Biophys. J. , vol.100 , pp. 2605-2613
    • Mondal, J.1    Bratton, B.P.2    Li, Y.3    Yethiraj, A.4    Weisshaar, J.C.5
  • 51
    • 33750510057 scopus 로고    scopus 로고
    • Shape and compaction of escherichia coli nucleoids
    • Zimmerman, S. B. (2006) Shape and compaction of Escherichia coli nucleoids. J. Struct. Biol. 156, 255-261
    • (2006) J. Struct. Biol. , vol.156 , pp. 255-261
    • Zimmerman, S.B.1
  • 52
    • 84872267642 scopus 로고    scopus 로고
    • Membrane heterogeneity created by transertion is a global regulator in bacteria
    • Fishov, I., and Norris, V. (2012) Membrane heterogeneity created by transertion is a global regulator in bacteria. Curr. Opin. Microbiol. 15, 724-730
    • (2012) Curr. Opin. Microbiol. , vol.15 , pp. 724-730
    • Fishov, I.1    Norris, V.2


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