-
1
-
-
0019362778
-
Nomenclature for "micrococcus radiodurans" and other radiation-resistant cocci: Deinococcaceae fam. Nov. And Deinococcus gen. Nov., including five species
-
Brooks BW, Murray RGE (1981) Nomenclature for "Micrococcus radiodurans" and other radiation-resistant cocci: Deinococcaceae fam. nov. and Deinococcus gen. nov., including five species. Int J Syst Evol Microbiol 31(3):353-360
-
(1981)
Int J Syst Evol Microbiol
, vol.31
, Issue.3
, pp. 353-360
-
-
Brooks, B.W.1
Murray, R.G.E.2
-
2
-
-
0020407158
-
Nonstaining (KOH) method for determination of Gram reactions of marine bacteria
-
1:STN:280:DyaL3s%2FntlCitw%3D%3D
-
Buck JD (1982) Nonstaining (KOH) method for determination of Gram reactions of marine bacteria. Appl Environ Microbiol 44:992-993
-
(1982)
Appl Environ Microbiol
, vol.44
, pp. 992-993
-
-
Buck, J.D.1
-
3
-
-
0019490792
-
Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implication
-
1:STN:280:DyaL3M3ntVWrtQ%3D%3D
-
Collins MD, Jones D (1981) Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implication. Microbiol Rev 45(2):316-354
-
(1981)
Microbiol Rev
, vol.45
, Issue.2
, pp. 316-354
-
-
Collins, M.D.1
Jones, D.2
-
4
-
-
8344278843
-
Accumulation of Mn(II) in Deinococcus radiodurans facilitates gamma-radiation resistance
-
10.1126/science.1103185 1:CAS:528:DC%2BD2cXptFyjur0%3D 10.1126/science.1103185
-
Daly MJ, Gaidamakova EK, Matrosova VY, Vasilenko A, Zhai M, Venkateswaran A, Hess M, Omelchenko MV, Kostandarithes HM, Makarova KS, Wackett LP, Fredrickson JK, Ghosal D (2004) Accumulation of Mn(II) in Deinococcus radiodurans facilitates gamma-radiation resistance. Science 306(5698):1025-1028. doi: 10.1126/science.1103185
-
(2004)
Science
, vol.306
, Issue.5698
, pp. 1025-1028
-
-
Daly, M.J.1
Gaidamakova, E.K.2
Matrosova, V.Y.3
Vasilenko, A.4
Zhai, M.5
Venkateswaran, A.6
Hess, M.7
Omelchenko, M.V.8
Kostandarithes, H.M.9
Makarova, K.S.10
Wackett, L.P.11
Fredrickson, J.K.12
Ghosal, D.13
-
5
-
-
0024358339
-
Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
-
Ezaki T, Hashimoto Y, Yabuuchi E (1989) Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Evol Microbiol 39:224-229
-
(1989)
Int J Syst Evol Microbiol
, vol.39
, pp. 224-229
-
-
Ezaki, T.1
Hashimoto, Y.2
Yabuuchi, E.3
-
6
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
10.2307/2408678
-
Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
7
-
-
84959747425
-
Toward defining the course of evolution: Minimum change for a specified tree topology
-
10.2307/2412116
-
Fitch WM (1971) Toward defining the course of evolution: minimum change for a specified tree topology. Syst Zool 20(4):406-416
-
(1971)
Syst Zool
, vol.20
, Issue.4
, pp. 406-416
-
-
Fitch, W.M.1
-
8
-
-
0030435636
-
Comparative lipoquinone analysis of influent sewage and activated sludge by high performance liquid chromatography and photodiode array detection
-
1:CAS:528:DyaK2sXht1SisrY%3D 10.2323/jgam.42.457
-
Hiraishi A, Ueda Y, Ishihara J, Mori T (1996) Comparative lipoquinone analysis of influent sewage and activated sludge by high performance liquid chromatography and photodiode array detection. J Gen Appl Microbiol 42:457-469
-
(1996)
J Gen Appl Microbiol
, vol.42
, pp. 457-469
-
-
Hiraishi, A.1
Ueda, Y.2
Ishihara, J.3
Mori, T.4
-
9
-
-
9944230452
-
Deinococcus frigens sp. Nov., Deinococcus saxicola sp. Nov., and Deinococcus marmoris sp. Nov., low temperature and draught-tolerating, UV-resistant bacteria from continental Antarctica
-
10.1078/0723202042370008 1:CAS:528:DC%2BD2MXhtF2mtrs%3D 10.1078/0723202042370008
-
Hirsch P, Gallikowski CA, Siebert J, Peissl K, Kroppenstedt R, Schumann P, Stackebrandt E, Anderson R (2004) Deinococcus frigens sp. Nov., Deinococcus saxicola sp. Nov., and Deinococcus marmoris sp. Nov., low temperature and draught-tolerating, UV-resistant bacteria from continental Antarctica. Syst Appl Microbiol 27(6):636-645. doi: 10.1078/0723202042370008
-
(2004)
Syst Appl Microbiol
, vol.27
, Issue.6
, pp. 636-645
-
-
Hirsch, P.1
Gallikowski, C.A.2
Siebert, J.3
Peissl, K.4
Kroppenstedt, R.5
Schumann, P.6
Stackebrandt, E.7
Anderson, R.8
-
10
-
-
55849133004
-
Deinococcus aquaticus sp. Nov., isolated from fresh water, and Deinococcus caeni sp. Nov., isolated from activated sludge
-
10.1099/ijs.0.64082-0 1:CAS:528:DC%2BD1cXhtlyjtbfL 10.1099/ijs.0.64082-0
-
Im WT, Jung HM, Ten LN, Kim MK, Bora N, Goodfellow M, Lim S, Jung J, Lee ST (2008) Deinococcus aquaticus sp. Nov., isolated from fresh water, and Deinococcus caeni sp. Nov., isolated from activated sludge. Int J Syst Evol Microbiol 58:2348-2353. doi: 10.1099/ijs.0.64082-0
-
(2008)
Int J Syst Evol Microbiol
, vol.58
, pp. 2348-2353
-
-
Im, W.T.1
Jung, H.M.2
Ten, L.N.3
Kim, M.K.4
Bora, N.5
Goodfellow, M.6
Lim, S.7
Jung, J.8
Lee, S.T.9
-
11
-
-
58949085996
-
Deinococcus aquatilis sp. Nov., isolated from water
-
10.1099/ijs.0.2008/001206-0 10.1099/ijs.0.2008/001206-0
-
Kämpfer P, Lodders N, Huber B, Falsen E, Busse HJ (2008) Deinococcus aquatilis sp. Nov., isolated from water. Int J Syst Evol Microbiol 58:2803-2806. doi: 10.1099/ijs.0.2008/001206-0
-
(2008)
Int J Syst Evol Microbiol
, vol.58
, pp. 2803-2806
-
-
Kämpfer, P.1
Lodders, N.2
Huber, B.3
Falsen, E.4
Busse, H.J.5
-
12
-
-
84863230041
-
Introducing EzTaxon-e: A prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species
-
10.1099/ijs.0.038075-0 1:CAS:528:DC%2BC38Xms1Wisrg%3D 10.1099/ijs.0.038075-0
-
Kim OS, Cho YJ, Lee K, Yoon SH, Kim M, Na H, Park SC, Jeon YS, Lee JH, Yi H, Won S, Chun J (2012) Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. Int J Syst Evol Microbiol 62:716-721. doi: 10.1099/ijs.0.038075-0
-
(2012)
Int J Syst Evol Microbiol
, vol.62
, pp. 716-721
-
-
Kim, O.S.1
Cho, Y.J.2
Lee, K.3
Yoon, S.H.4
Kim, M.5
Na, H.6
Park, S.C.7
Jeon, Y.S.8
Lee, J.H.9
Yi, H.10
Won, S.11
Chun, J.12
-
13
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
1:CAS:528:DyaL3MXmtFSktg%3D%3D 10.1007/BF01731581
-
Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16(2):111-120
-
(1980)
J Mol Evol
, vol.16
, Issue.2
, pp. 111-120
-
-
Kimura, M.1
-
14
-
-
77956800518
-
Lipid and cell-wall analysis in bacterial systematics
-
1:CAS:528:DyaL1cXitFylt78%3D 10.1016/S0580-9517(08)70410-0
-
Komagata K, Suzuki KI (1987) Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19:161-205
-
(1987)
Methods Microbiol
, vol.19
, pp. 161-205
-
-
Komagata, K.1
Suzuki, K.I.2
-
15
-
-
0023752959
-
Fatty acids, antibiotic resistance and deoxyribonucleic acid homology groups of Bradyrhizobium japonicum
-
10.1099/00207713-38-4-358 1:CAS:528:DyaL1MXlsVWqsQ%3D%3D
-
Kuykendall LD, Roy MA, O'Neill JJ, Devine TE (1988) Fatty acids, antibiotic resistance and deoxyribonucleic acid homology groups of Bradyrhizobium japonicum. Int J Syst Evol Microbiol 38:358-361. doi: 10.1099/00207713-38-4-358
-
(1988)
Int J Syst Evol Microbiol
, vol.38
, pp. 358-361
-
-
Kuykendall, L.D.1
Roy, M.A.2
O'Neill, J.J.3
Devine, T.E.4
-
16
-
-
33646186936
-
Deinococcus ficus sp. Nov., isolated from the rhizosphere of Ficus religiosa L.
-
10.1099/ijs.0.64007-0 1:CAS:528:DC%2BD28XkvFGns78%3D 10.1099/ijs.0.64007- 0
-
Lai WA, Kämpfer P, Arun AB, Shen FT, Huber B, Rekha PD, Young CC (2006) Deinococcus ficus sp. Nov., isolated from the rhizosphere of Ficus religiosa L. Int J Syst Evol Microbiol 56:787-791. doi: 10.1099/ijs.0.64007-0
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 787-791
-
-
Lai, W.A.1
Kämpfer, P.2
Arun, A.B.3
Shen, F.T.4
Huber, B.5
Rekha, P.D.6
Young, C.C.7
-
17
-
-
0021182575
-
An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids
-
10.1016/0167-7012(84)90018-6 1:CAS:528:DyaL2cXlt1Kitr4%3D 10.1016/0167-7012(84)90018-6
-
Minnikin DE, O'Donnell AG, Goodfellow M, Alderson G, Athalye M, Schaal A, Parlett JH (1984) An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J Microbiol Methods 2(5):233-241. doi: 10.1016/0167-7012(84)90018-6
-
(1984)
J Microbiol Methods
, vol.2
, Issue.5
, pp. 233-241
-
-
Minnikin, D.E.1
O'Donnell, A.G.2
Goodfellow, M.3
Alderson, G.4
Athalye, M.5
Schaal, A.6
Parlett, J.H.7
-
18
-
-
0030950157
-
Phylogenetic diversity of the Deinococci as determined by 16S ribosomal DNA sequence comparison
-
1:CAS:528:DyaK2sXislGit7s%3D
-
Rainey FA, Nobre MF, Schumann P, Stackebrandt E, da Costa MS (1997) Phylogenetic diversity of the Deinococci as determined by 16S ribosomal DNA sequence comparison. Int J Syst Evol Microbiol 47(2):510-514
-
(1997)
Int J Syst Evol Microbiol
, vol.47
, Issue.2
, pp. 510-514
-
-
Rainey, F.A.1
Nobre, M.F.2
Schumann, P.3
Stackebrandt, E.4
Da Costa, M.S.5
-
19
-
-
20444383583
-
Extensive diversity of ionizing-radiation-resistant bacteria recovered from Sonoran Desert soil and description of nine new species of the genus Deinococcus obtained from a single soil sample
-
10.1128/AEM.71.9.5225-5235.2005 1:CAS:528:DC%2BD2MXhtVahtr7M 10.1128/AEM.71.9.5225-5235.2005
-
Rainey FA, Ray K, Ferreira M, Gatz BZ, Nobre MF, Bagaley D, Rash BA, Park MJ, Earl AM, Shank NC, Small AM, Henk MC, Battista JR, Kämpfer P, da Costa MS (2005) Extensive diversity of ionizing-radiation-resistant bacteria recovered from Sonoran Desert soil and description of nine new species of the genus Deinococcus obtained from a single soil sample. Appl Environ Microbiol 71(9):5225-5235. doi: 10.1128/AEM.71.9.5225-5235.2005
-
(2005)
Appl Environ Microbiol
, vol.71
, Issue.9
, pp. 5225-5235
-
-
Rainey, F.A.1
Ray, K.2
Ferreira, M.3
Gatz, B.Z.4
Nobre, M.F.5
Bagaley, D.6
Rash, B.A.7
Park, M.J.8
Earl, A.M.9
Shank, N.C.10
Small, A.M.11
Henk, M.C.12
Battista, J.R.13
Kämpfer, P.14
Da Costa, M.S.15
-
20
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
1:STN:280:DyaL1c7ovFSjsA%3D%3D
-
Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4(4):406-425
-
(1987)
Mol Biol Evol
, vol.4
, Issue.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
21
-
-
84861889171
-
Deinococcus daejeonensis sp. Nov., isolated from sludge in a sewage disposal plant
-
10.1099/ijs.0.033316-0 1:CAS:528:DC%2BC38XhtF2jsL%2FE 10.1099/ijs.0.033316-0
-
Srinivasan S, Kim MK, Lim S, Joe M, Lee M (2012) Deinococcus daejeonensis sp. Nov., isolated from sludge in a sewage disposal plant. Int J Syst Evol Microbiol 62:1265-1270. doi: 10.1099/ijs.0.033316-0
-
(2012)
Int J Syst Evol Microbiol
, vol.62
, pp. 1265-1270
-
-
Srinivasan, S.1
Kim, M.K.2
Lim, S.3
Joe, M.4
Lee, M.5
-
22
-
-
84870895955
-
Deinococcus humi sp. Nov., isolated from soil
-
10.1099/ijs.0.037234-0 1:CAS:528:DC%2BC3sXjs1OrtLs%3D 10.1099/ijs.0.037234-0
-
Srinivasan S, Lee JJ, Lim S, Joe M, Kim MK (2012) Deinococcus humi sp. Nov., isolated from soil. Int J Syst Evol Microbiol 62:2844-2850. doi: 10.1099/ijs.0.037234-0
-
(2012)
Int J Syst Evol Microbiol
, vol.62
, pp. 2844-2850
-
-
Srinivasan, S.1
Lee, J.J.2
Lim, S.3
Joe, M.4
Kim, M.K.5
-
23
-
-
0028028182
-
Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
-
10.1099/00207713-44-4-846 1:CAS:528:DyaK2MXitFCnsb4%3D
-
Stackebrandt E, Goebel BM (1994) Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Evol Microbiol 44:846-849. doi: 10.1099/00207713-44- 4-846
-
(1994)
Int J Syst Evol Microbiol
, vol.44
, pp. 846-849
-
-
Stackebrandt, E.1
Goebel, B.M.2
-
24
-
-
79957613599
-
MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
10.1093/molbev/msr121 1:CAS:528:DC%2BC3MXht1eiu73K 10.1093/molbev/msr121
-
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28(10):2731-2739. doi: 10.1093/molbev/msr121
-
(2011)
Mol Biol Evol
, vol.28
, Issue.10
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
25
-
-
0021715576
-
Determination of DNA base composition by reversed-phase high-performance liquid chromatography
-
1:CAS:528:DyaL2MXitVGktg%3D%3D 10.1111/j.1574-6968.1984.tb01388.x
-
Tamaoka J, Komagata K (1984) Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25:125-128
-
(1984)
FEMS Microbiol Lett
, vol.25
, pp. 125-128
-
-
Tamaoka, J.1
Komagata, K.2
-
26
-
-
0031574072
-
The CLUSTAL-X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
10.1093/nar/25.24.4876 1:CAS:528:DyaK1cXntFyntQ%3D%3D 10.1093/nar/25.24.4876
-
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25(24):4876-4882. doi: 10.1093/nar/25.24.4876
-
(1997)
Nucleic Acids Res
, vol.25
, Issue.24
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
27
-
-
0000770675
-
International committee on systematic bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics
-
Wayne LG, Brenner DJ, Colwell RR, Grimont PAD, Kandler O, Krichevsky MI, Moore LH, Moore WEC, Murray RGE, Stackebrandt E, Starr MP, Trüper HG (1987) International committee on systematic bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Evol Microbiol 37:463-464
-
(1987)
Int J Syst Evol Microbiol
, vol.37
, pp. 463-464
-
-
Wayne, L.G.1
Brenner, D.J.2
Colwell, R.R.3
Grimont, P.A.D.4
Kandler, O.5
Krichevsky, M.I.6
Moore, L.H.7
Moore, W.E.C.8
Murray, R.G.E.9
Stackebrandt, E.10
Starr, M.P.11
Trüper, H.G.12
-
28
-
-
13044313472
-
Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1
-
1:CAS:528:DyaK1MXns1aisL8%3D 10.1126/science.286.5444.1571
-
White O, Eisen JA, Heidelberg JF, Hickey EK, Peterson JD, Dodson RJ, Haft DH, Gwinn ML, Nelson WC, Richardson DL, Moffat KS, Qin H, Jiang L, Pamphile W, Crosby M, Shen M, Vamathevan JJ, Lam P, McDonald L, Utterback T, Zalewski C, Makarova KS, Aravind L, Daly MJ, Minton KW, Fleischmann RD, Ketchum KA, Nelson KE, Salzberg S, Smith HO, Venter JC, Fraser CM (1999) Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1. Science 286(5444):1571-1577
-
(1999)
Science
, vol.286
, Issue.5444
, pp. 1571-1577
-
-
White, O.1
Eisen, J.A.2
Heidelberg, J.F.3
Hickey, E.K.4
Peterson, J.D.5
Dodson, R.J.6
Haft, D.H.7
Gwinn, M.L.8
Nelson, W.C.9
Richardson, D.L.10
Moffat, K.S.11
Qin, H.12
Jiang, L.13
Pamphile, W.14
Crosby, M.15
Shen, M.16
Vamathevan, J.J.17
Lam, P.18
McDonald, L.19
Utterback, T.20
Zalewski, C.21
Makarova, K.S.22
Aravind, L.23
Daly, M.J.24
Minton, K.W.25
Fleischmann, R.D.26
Ketchum, K.A.27
Nelson, K.E.28
Salzberg, S.29
Smith, H.O.30
Venter, J.C.31
Fraser, C.M.32
more..
-
29
-
-
77952710648
-
Deinococcus aerolatus sp. Nov. And Deinococcus aerophilus sp. Nov., isolated from air samples
-
10.1099/ijs.0.016030-0 1:CAS:528:DC%2BC3cXnsVenu7c%3D 10.1099/ijs.0.016030-0
-
Yoo SH, Weon HY, Kim SJ, Kim YS, Kim BY, Kwon SW (2010) Deinococcus aerolatus sp. Nov. And Deinococcus aerophilus sp. Nov., isolated from air samples. Int J Syst Evol Microbiol 60:1191-1195. doi: 10.1099/ijs.0.016030-0
-
(2010)
Int J Syst Evol Microbiol
, vol.60
, pp. 1191-1195
-
-
Yoo, S.H.1
Weon, H.Y.2
Kim, S.J.3
Kim, Y.S.4
Kim, B.Y.5
Kwon, S.W.6
|