-
1
-
-
49749125963
-
Cellulosic ethanol production using the naturally occurring xylose-fermenting yeast, Pichia stipitis
-
10.1007/s12010-007-9086-7 18431677 10.1007/s10529-008-9728-z
-
Agbogbo FK, Coward-Kelly G (2008) Cellulosic ethanol production using the naturally occurring xylose-fermenting yeast, Pichia stipitis. Biotechnol Lett 30:1515-1524. doi: 10.1007/s12010-007-9086-7
-
(2008)
Biotechnol Lett
, vol.30
, pp. 1515-1524
-
-
Agbogbo, F.K.1
Coward-Kelly, G.2
-
2
-
-
32144432437
-
The SWISS-MODEL workspace: A web-based environment for protein structure homology modelling
-
10.1093/bioinformatics/bti770 16301204 10.1093/bioinformatics/bti770
-
Arnold K, Bordoli L, Kopp J, Schwede T (2006) The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling. Bioinformatics 22:195-201. doi: 10.1093/bioinformatics/bti770
-
(2006)
Bioinformatics
, vol.22
, pp. 195-201
-
-
Arnold, K.1
Bordoli, L.2
Kopp, J.3
Schwede, T.4
-
4
-
-
3042795436
-
Biological bleaching of chemical pulps
-
10.1080/07388550490465817 15328766 10.1080/07388550490465817
-
Bajpai P (2004) Biological bleaching of chemical pulps. Crit Rev Biotechnol 24:1-58. doi: 10.1080/07388550490465817
-
(2004)
Crit Rev Biotechnol
, vol.24
, pp. 1-58
-
-
Bajpai, P.1
-
5
-
-
0034882564
-
Microbial xylanases and their industrial applications: A review
-
10.1007/s002530100704 11548999 10.1007/s002530100704
-
Beg QK, Kapoor M, Mahajan L, Hoondal GS (2001) Microbial xylanases and their industrial applications: a review. Appl Microbiol Biotechnol 56:326-338. doi: 10.1007/s002530100704
-
(2001)
Appl Microbiol Biotechnol
, vol.56
, pp. 326-338
-
-
Beg, Q.K.1
Kapoor, M.2
Mahajan, L.3
Hoondal, G.S.4
-
6
-
-
3042521098
-
Improved prediction of signal peptides: SignalP 3.0
-
10.1016/j.jmb.2004.05.028 15223320 10.1016/j.jmb.2004.05.028
-
Bendtsen JD, Nielsen H, von Heijne G, Brunak S (2004) Improved prediction of signal peptides: SignalP 3.0. J Mol Biol 340:783-795. doi: 10.1016/j.jmb.2004.05.028
-
(2004)
J Mol Biol
, vol.340
, pp. 783-795
-
-
Bendtsen, J.D.1
Nielsen, H.2
Von Heijne, G.3
Brunak, S.4
-
7
-
-
40549141792
-
QMEAN: A comprehensive scoring function for model quality assessment
-
10.1002/prot.21715 17932912 10.1002/prot.21715
-
Benkert P, Tosatto SC, Schomburg D (2008) QMEAN: a comprehensive scoring function for model quality assessment. Proteins 71:261-277. doi: 10.1002/prot.21715
-
(2008)
Proteins
, vol.71
, pp. 261-277
-
-
Benkert, P.1
Tosatto, S.C.2
Schomburg, D.3
-
8
-
-
0022386956
-
Microbial xylanolytic systems
-
10.1016/0167-7799(85)90004-6 10.1016/0167-7799(85)90004-6
-
Biely P (1985) Microbial xylanolytic systems. Trends Biotechnol 3:286-290. doi: 10.1016/0167-7799(85)90004-6
-
(1985)
Trends Biotechnol
, vol.3
, pp. 286-290
-
-
Biely, P.1
-
9
-
-
84876683833
-
GUX1 and GUX2 glucuronyltransferases decorate distinct domains of glucuronoxylan with different substitution patterns
-
10.1111/tpj.12135 23373848 10.1111/tpj.12135
-
Bromley JR, Busse-Wicher M, Tryfona T, Mortimer JC, Zhang Z, Brown D, Dupree P (2013) GUX1 and GUX2 glucuronyltransferases decorate distinct domains of glucuronoxylan with different substitution patterns. Plant J 74(3):423-434. doi: 10.1111/tpj.12135
-
(2013)
Plant J
, vol.74
, Issue.3
, pp. 423-434
-
-
Bromley, J.R.1
Busse-Wicher, M.2
Tryfona, T.3
Mortimer, J.C.4
Zhang, Z.5
Brown, D.6
Dupree, P.7
-
10
-
-
58149200943
-
The Carbohydrate-Active Enzymes database (CAZy): An expert resource for glycogenomics
-
10.1093/nar/gkn663 2686590 18838391 10.1093/nar/gkn663
-
Cantarel BL, Coutinho PM, Rancurel C, Bernard T, Lombard V, Henrissat B (2009) The Carbohydrate-Active Enzymes database (CAZy): an expert resource for glycogenomics. Nucleic Acids Res 37:D233-D238. doi: 10.1093/nar/gkn663
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Cantarel, B.L.1
Coutinho, P.M.2
Rancurel, C.3
Bernard, T.4
Lombard, V.5
Henrissat, B.6
-
11
-
-
12144282020
-
Xylanases, xylanase families, and extremophilic xylanases
-
10.1016/j.femsre.2004.06.005 15652973 10.1016/j.femsre.2004.06.005
-
Collins T, Gerday C, Feller G (2005) Xylanases, xylanase families, and extremophilic xylanases. FEMS Microbiol Rev 29:3-23. doi: 10.1016/j.femsre.2004. 06.005
-
(2005)
FEMS Microbiol Rev
, vol.29
, pp. 3-23
-
-
Collins, T.1
Gerday, C.2
Feller, G.3
-
12
-
-
0036315660
-
Arabinoxylans and endoxylanases in wheat flour bread-making
-
10.1006/jcrs.2001.0433 10.1006/jcrs.2001.0433
-
Courtin CM, Delcour JA (2002) Arabinoxylans and endoxylanases in wheat flour bread-making. J Cereal Sci 35:225-243. doi: 10.1006/jcrs.2001.0433
-
(2002)
J Cereal Sci
, vol.35
, pp. 225-243
-
-
Courtin, C.M.1
Delcour, J.A.2
-
13
-
-
33746818382
-
Evolving enzyme technology: Impact on commercial poultry nutrition
-
10.1079/NRR2006121 19079878 10.1079/NRR2006121
-
Cowieson AJ, Hruby M, Pierson EE (2006) Evolving enzyme technology: impact on commercial poultry nutrition. Nutr Res Rev 19:90-103. doi: 10.1079/NRR2006121
-
(2006)
Nutr Res Rev
, vol.19
, pp. 90-103
-
-
Cowieson, A.J.1
Hruby, M.2
Pierson, E.E.3
-
14
-
-
0029645404
-
Structures and mechanisms of glycosyl hydrolases
-
10.1016/S0969-2126(01)00220-9 8535779 10.1016/S0969-2126(01)00220-9
-
Davies G, Henrissat B (1995) Structures and mechanisms of glycosyl hydrolases. Structure 3:853-859. doi: 10.1016/S0969-2126(01)00220-9
-
(1995)
Structure
, vol.3
, pp. 853-859
-
-
Davies, G.1
Henrissat, B.2
-
15
-
-
33747839468
-
ScanProsite: Detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins
-
10.1093/nar/gkl124 1538847 16845026 10.1093/nar/gkl124
-
de Castro E, Sigrist CJ, Gattiker A, Bulliard V, Langendijk-Genevaux PS, Gasteiger E, Bairoch A, Hulo N (2006) ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins. Nucleic Acids Res 34:W362-W365. doi: 10.1093/nar/gkl124
-
(2006)
Nucleic Acids Res
, vol.34
-
-
De Castro, E.1
Sigrist, C.J.2
Gattiker, A.3
Bulliard, V.4
Langendijk-Genevaux, P.S.5
Gasteiger, E.6
Bairoch, A.7
Hulo, N.8
-
16
-
-
4744340582
-
Cloning, functional expression, and characterization of three Phanerochaete chrysosporium endo-1,4-β-xylanases
-
10.1007/s00294-004-0520-x 15278289 10.1007/s00294-004-0520-x
-
Decelle B, Tsang A, Storms RK (2004) Cloning, functional expression, and characterization of three Phanerochaete chrysosporium endo-1,4-β-xylanases. Curr Genet 46:166-175. doi: 10.1007/s00294-004-0520-x
-
(2004)
Curr Genet
, vol.46
, pp. 166-175
-
-
Decelle, B.1
Tsang, A.2
Storms, R.K.3
-
17
-
-
0022729451
-
Xylose fermentation by Candida shehatae and Pichia stipitis: Effects of pH, temperature, and substrate concentration
-
10.1016/0141-0229(86)90136-5 10.1016/0141-0229(86)90136-5
-
du Preez JC, Bosch M, Prior BA (1986) Xylose fermentation by Candida shehatae and Pichia stipitis: effects of pH, temperature, and substrate concentration. Enzym Microb Technol 8:360-364. doi: 10.1016/0141-0229(86)90136-5
-
(1986)
Enzym Microb Technol
, vol.8
, pp. 360-364
-
-
Du Preez, J.C.1
Bosch, M.2
Prior, B.A.3
-
18
-
-
0025804758
-
Domains in microbial β-1, 4-glycanases: Sequence conservation, function, and enzyme families
-
372816 1886523
-
Gilkes NR, Henrissat B, Kilburn DG, Miller RC Jr, Warren RA (1991) Domains in microbial β-1, 4-glycanases: sequence conservation, function, and enzyme families. Microbiol Rev 55:303-315
-
(1991)
Microbiol Rev
, vol.55
, pp. 303-315
-
-
Gilkes, N.R.1
Henrissat, B.2
Kilburn, D.G.3
Miller, Jr.R.C.4
Warren, R.A.5
-
19
-
-
42249114507
-
Sustainable liquid biofuels from biomass: The writing's on the walls
-
10.1111/j.1469-8137.2008.02422 18373653 10.1111/j.1469-8137.2008.02422.x
-
Gomez LD, Steele-King CG, McQueen-Mason SJ (2008) Sustainable liquid biofuels from biomass: the writing's on the walls. New Phytol 178:473-485. doi: 10.1111/j.1469-8137.2008.02422
-
(2008)
New Phytol
, vol.178
, pp. 473-485
-
-
Gomez, L.D.1
Steele-King, C.G.2
McQueen-Mason, S.J.3
-
20
-
-
2942562629
-
Genetic and molecular basis of grass cell-wall degradability. I. Lignin-cell wall matrix interactions
-
10.1016/j.crvi.2004.02.009 15255476 10.1016/j.crvi.2004.02.009
-
Grabber JH, Ralph J, Lapierre C, Barriere Y (2004) Genetic and molecular basis of grass cell-wall degradability. I. Lignin-cell wall matrix interactions. C R Biol 327:455-465. doi: 10.1016/j.crvi.2004.02.009
-
(2004)
C R Biol
, vol.327
, pp. 455-465
-
-
Grabber, J.H.1
Ralph, J.2
Lapierre, C.3
Barriere, Y.4
-
21
-
-
33846781800
-
A rare sugar xylitol. Part II: Biotechnological production and future applications of xylitol
-
10.1007/s00253-006-0760-4 17216458 10.1007/s00253-006-0760-4
-
Granström TB, Izumori K, Leisola M (2007) A rare sugar xylitol. Part II: biotechnological production and future applications of xylitol. Appl Microbiol Biotechnol 74:273-276. doi: 10.1007/s00253-006-0760-4
-
(2007)
Appl Microbiol Biotechnol
, vol.74
, pp. 273-276
-
-
Granström, T.B.1
Izumori, K.2
Leisola, M.3
-
22
-
-
7944236701
-
Specific xyloglucanases as a new class of polysaccharide-degrading enzymes
-
10.1016/j.bbagen.2004.07.001 15541296 10.1016/j.bbagen.2004.07.001
-
Grishutin SG, Gusakov AV, Markov AV, Ustinov BB, Semenova MV, Sinitsyn AP (2004) Specific xyloglucanases as a new class of polysaccharide-degrading enzymes. Biochim Biophys Acta 1674:268-281. doi: 10.1016/j.bbagen.2004.07.001
-
(2004)
Biochim Biophys Acta
, vol.1674
, pp. 268-281
-
-
Grishutin, S.G.1
Gusakov, A.V.2
Markov, A.V.3
Ustinov, B.B.4
Semenova, M.V.5
Sinitsyn, A.P.6
-
23
-
-
0028774533
-
Structure of the catalytic core of the family F xylanase from Pseudomonas fluorescens and identification of the xylopentaose-binding sites
-
10.1016/S0969-2126(94)00112-X 7881909 10.1016/S0969-2126(94)00112-X
-
Harris GW, Jenkins JA, Connerton I, Cummings N, Lo Leggio L, Scott M, Hazlewood GP, Laurie JI, Gilbert HJ, Pickersgill RW (1994) Structure of the catalytic core of the family F xylanase from Pseudomonas fluorescens and identification of the xylopentaose-binding sites. Structure 2:1107-1116. doi: 10.1016/S0969-2126(94)00112-X
-
(1994)
Structure
, vol.2
, pp. 1107-1116
-
-
Harris, G.W.1
Jenkins, J.A.2
Connerton, I.3
Cummings, N.4
Lo Leggio, L.5
Scott, M.6
Hazlewood, G.P.7
Laurie, J.I.8
Gilbert, H.J.9
Pickersgill, R.W.10
-
24
-
-
35348862096
-
The selective and differential effects of cycloheximide on many strains of Coccidioides immitis
-
13520665
-
Huppert M, Walker LJ (1958) The selective and differential effects of cycloheximide on many strains of Coccidioides immitis. Am J Clin Pathol 29:291-295
-
(1958)
Am J Clin Pathol
, vol.29
, pp. 291-295
-
-
Huppert, M.1
Walker, L.J.2
-
25
-
-
0034820534
-
Distribution of uronic acids in xylans from various species of soft- and hardwood as determined by MALDI mass spectrometry
-
10.1021/bm010062x
-
Jacobs A, Larsson PT, Dahlman O (2001) Distribution of uronic acids in xylans from various species of soft- and hardwood as determined by MALDI mass spectrometry. Biogeosciences 2:979-990. doi: 10.1021/bm010062x
-
(2001)
Biogeosciences
, vol.2
, pp. 979-990
-
-
Jacobs, A.1
Larsson, P.T.2
Dahlman, O.3
-
26
-
-
18444396585
-
Determination of thioxylo-oligosaccharide binding to family 11 xylanases using electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry and X-ray crystallography
-
10.1111/j.1742-4658.2005.04659.x 15853815 10.1111/j.1742-4658.2005.04659. x
-
Jänis J, Hakanpää J, Hakulinen N, Ibatullin FM, Hoxha A, Derrick PJ, Rouvinen J, Vainiotalo P (2005) Determination of thioxylo-oligosaccharide binding to family 11 xylanases using electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry and X-ray crystallography. FEBS J 272:2317-2333. doi: 10.1111/j.1742-4658.2005.04659.x
-
(2005)
FEBS J
, vol.272
, pp. 2317-2333
-
-
Jänis, J.1
Hakanpää, J.2
Hakulinen, N.3
Ibatullin, F.M.4
Hoxha, A.5
Derrick, P.J.6
Rouvinen, J.7
Vainiotalo, P.8
-
27
-
-
84865431024
-
Microbial xylanases: Engineering, production, and industrial applications
-
10.1016/j.biotechadv.2011.11.006 22138412 10.1016/j.biotechadv.2011.11. 006
-
Juturu V, Wu JC (2012) Microbial xylanases: engineering, production, and industrial applications. Biotechnol Adv 30:1219-1227. doi: 10.1016/j.biotechadv. 2011.11.006
-
(2012)
Biotechnol Adv
, vol.30
, pp. 1219-1227
-
-
Juturu, V.1
Wu, J.C.2
-
28
-
-
33947656492
-
Structural differences of xylans affect their interaction with cellulose
-
10.1016/j.carbpol.2006.09.006 10.1016/j.carbpol.2006.09.006
-
Kabel MA, van den Borne H, Vincken J, Voragen AGJ, Schols HA (2007) Structural differences of xylans affect their interaction with cellulose. Carbohydr Polym 69:94-105. doi: 10.1016/j.carbpol.2006.09.006
-
(2007)
Carbohydr Polym
, vol.69
, pp. 94-105
-
-
Kabel, M.A.1
Van Den Borne, H.2
Vincken, J.3
Voragen, A.G.J.4
Schols, H.A.5
-
29
-
-
0348062818
-
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models
-
10.1093/nar/gkh008 308743 14681401 10.1093/nar/gkh008
-
Kopp J, Schwede T (2004) The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models. Nucleic Acids Res 32:D230-D234. doi: 10.1093/nar/gkh008
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Kopp, J.1
Schwede, T.2
-
30
-
-
0024962351
-
Determination of the three-dimensional solution structure of the C-terminal domain of cellobiohydrolase i from Trichoderma reesei. A study using nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing
-
10.1021/bi00444a016 10.1021/bi00444a016
-
Kraulis J, Clore GM, Nilges M, Jones TA, Pettersson G, Knowles J, Gronenborn AM (1989) Determination of the three-dimensional solution structure of the C-terminal domain of cellobiohydrolase I from Trichoderma reesei. A study using nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing. Biochem 28:7241-7257. doi: 10.1021/bi00444a016
-
(1989)
Biochem
, vol.28
, pp. 7241-7257
-
-
Kraulis, J.1
Clore, G.M.2
Nilges, M.3
Jones, T.A.4
Pettersson, G.5
Knowles, J.6
Gronenborn, A.M.7
-
31
-
-
0032984477
-
Molecular and biotechnological aspects of xylanases
-
10.1111/j.1574-6976.1999.tb00407.x 10422261 10.1111/j.1574-6976.1999. tb00407.x
-
Kulkarni N, Shendye A, Rao M (1999) Molecular and biotechnological aspects of xylanases. FEMS Microbiol Rev 23:411-456. doi: 10.1111/j.1574-6976. 1999.tb00407.x
-
(1999)
FEMS Microbiol Rev
, vol.23
, pp. 411-456
-
-
Kulkarni, N.1
Shendye, A.2
Rao, M.3
-
32
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
10.1093/bioinformatics/btm404 17846036 10.1093/bioinformatics/btm404
-
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibson TJ, Higgins DG (2007) Clustal W and Clustal X version 2.0. Bioinformatics 23:2947-2948. doi: 10.1093/bioinformatics/btm404
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
Thompson, J.D.11
Gibson, T.J.12
Higgins, D.G.13
-
33
-
-
0000243829
-
PROCHECK: A program to check the stereochemical quality of protein structures
-
10.1107/S0021889892009944 10.1107/S0021889892009944
-
Laskowski RA, MacArthur MW, Moss DS, Thornton JM (1993) PROCHECK: a program to check the stereochemical quality of protein structures. J Appl Crystallogr 26:283-291. doi: 10.1107/S0021889892009944
-
(1993)
J Appl Crystallogr
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
Macarthur, M.W.2
Moss, D.S.3
Thornton, J.M.4
-
35
-
-
3242887157
-
CD-Search: Protein domain annotations on the fly
-
10.1093/nar/gkh454 441592 15215404 10.1093/nar/gkh454
-
Marchler-Bauer A, Bryant SH (2004) CD-Search: protein domain annotations on the fly. Nucleic Acids Res 32:W327-W331. doi: 10.1093/nar/gkh454
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Marchler-Bauer, A.1
Bryant, S.H.2
-
36
-
-
23144435719
-
TargetIdentifier: A webserver for identifying full-length cDNAs from EST sequences
-
10.1093/nar/gki436 1160197 15980559 10.1093/nar/gki436
-
Min XJ, Butler G, Storms R, Tsang A (2005a) TargetIdentifier: a webserver for identifying full-length cDNAs from EST sequences. Nucleic Acids Res 33:W669-W672. doi: 10.1093/nar/gki436
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Min, X.J.1
Butler, G.2
Storms, R.3
Tsang, A.4
-
37
-
-
23144455729
-
OrfPredictor: Predicting protein-coding regions in EST-derived sequences
-
10.1093/nar/gki394 1160155 15980561 10.1093/nar/gki394
-
Min XJ, Butler G, Storms R, Tsang A (2005b) OrfPredictor: predicting protein-coding regions in EST-derived sequences. Nucleic Acids Res 33:W677-W680. doi: 10.1093/nar/gki394
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Min, X.J.1
Butler, G.2
Storms, R.3
Tsang, A.4
-
38
-
-
0027968572
-
Identification of two acidic residues involved in the catalysis of xylanase A from Streptomyces lividans
-
1137222 7915112
-
Moreau A, Roberge M, Manin C, Shareck F, Kluepfel D, Morosoli R (1994) Identification of two acidic residues involved in the catalysis of xylanase A from Streptomyces lividans. Biochem J 302(Pt 1):291-295
-
(1994)
Biochem J
, vol.302
, Issue.PART 1
, pp. 291-295
-
-
Moreau, A.1
Roberge, M.2
Manin, C.3
Shareck, F.4
Kluepfel, D.5
Morosoli, R.6
-
39
-
-
33744513096
-
Detecting outliers when fitting data with nonlinear regression - A new method based on robust nonlinear regression and the false discovery rate
-
10.1186/1471-2105-7-123 10.1186/1471-2105-7-123
-
Motulsky HJ, Brown RE (2006) Detecting outliers when fitting data with nonlinear regression - a new method based on robust nonlinear regression and the false discovery rate. BMC Bioinforma 7:123. doi: 10.1186/1471-2105-7-123
-
(2006)
BMC Bioinforma
, vol.7
, pp. 123
-
-
Motulsky, H.J.1
Brown, R.E.2
-
40
-
-
0037244052
-
Thermostable xylanase from Thermoascus aurantiacus at ultrahigh resolution (0.89 A) at 100 K and atomic resolution (1.11 A) at 293 K refined anisotropically to small-molecule accuracy
-
10.1107/S0907444902020164 12499546 10.1107/S0907444902020164
-
Natesh R, Manikandan K, Bhanumoorthy P, Viswamitra MA, Ramakumar S (2003) Thermostable xylanase from Thermoascus aurantiacus at ultrahigh resolution (0.89 A) at 100 K and atomic resolution (1.11 A) at 293 K refined anisotropically to small-molecule accuracy. Acta Crystallogr D Biol Crystallogr 59:105-117. doi: 10.1107/S0907444902020164
-
(2003)
Acta Crystallogr D Biol Crystallogr
, vol.59
, pp. 105-117
-
-
Natesh, R.1
Manikandan, K.2
Bhanumoorthy, P.3
Viswamitra, M.A.4
Ramakumar, S.5
-
41
-
-
84857646538
-
GH11 xylanases: Structure/function/properties relationships and applications
-
10.1016/j.biotechadv.2011.10.003 22067746 10.1016/j.biotechadv.2011.10. 003
-
Paës G, Berrin J-G, Beaugrand J (2012) GH11 xylanases: structure/function/properties relationships and applications. Biotechnol Adv 30:564-592. doi: 10.1016/j.biotechadv.2011.10.003
-
(2012)
Biotechnol Adv
, vol.30
, pp. 564-592
-
-
Paës, G.1
Berrin, J.-G.2
Beaugrand, J.3
-
42
-
-
34547602473
-
MyHits: Improvements to an interactive resource for analyzing protein sequences
-
10.1093/nar/gkm352 1933190 17545200 10.1093/nar/gkm352
-
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L (2007) MyHits: improvements to an interactive resource for analyzing protein sequences. Nucleic Acids Res 35:W433-W437. doi: 10.1093/nar/gkm352
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Pagni, M.1
Ioannidis, V.2
Cerutti, L.3
Zahn-Zabal, M.4
Jongeneel, C.V.5
Hau, J.6
Martin, O.7
Kuznetsov, D.8
Falquet, L.9
-
43
-
-
4143103785
-
The dual nature of the wheat xylanase protein inhibitor XIP-I: Structural basis for the inhibition of family 10 and family 11 xylanases
-
15181003 10.1074/jbc.M404225200
-
Payan F, Leone P, Porciero S, Furniss C, Tahir T, Williamson G, Durand A, Manzanares P, Gilbert HJ, Juge N, Roussel A (2004) The dual nature of the wheat xylanase protein inhibitor XIP-I: structural basis for the inhibition of family 10 and family 11 xylanases. J Biol Chem 279:36029-36037
-
(2004)
J Biol Chem
, vol.279
, pp. 36029-36037
-
-
Payan, F.1
Leone, P.2
Porciero, S.3
Furniss, C.4
Tahir, T.5
Williamson, G.6
Durand, A.7
Manzanares, P.8
Gilbert, H.J.9
Juge, N.10
Roussel, A.11
-
44
-
-
10744230264
-
The mechanisms by which family 10 glycoside hydrolases bind decorated substrates
-
10.1074/jbc.M312278200 14668328 10.1074/jbc.M312278200
-
Pell G, Taylor EJ, Gloster TM, Turkenburg JP, Fontes CM, Ferreira LM, Nagy T, Clark SJ, Davies GJ, Gilbert HJ (2004) The mechanisms by which family 10 glycoside hydrolases bind decorated substrates. J Biol Chem 279:9597-9605. doi: 10.1074/jbc.M312278200
-
(2004)
J Biol Chem
, vol.279
, pp. 9597-9605
-
-
Pell, G.1
Taylor, E.J.2
Gloster, T.M.3
Turkenburg, J.P.4
Fontes, C.M.5
Ferreira, L.M.6
Nagy, T.7
Clark, S.J.8
Davies, G.J.9
Gilbert, H.J.10
-
45
-
-
34250663833
-
Arabidopsis irregular xylem8 and irregular xylem9: Implications for the complexity of glucuronoxylan biosynthesis
-
10.1105/tpc.106.049320 1867335 17322407 10.1105/tpc.106.049320
-
Peña MJ, Zhong R, Zhou GK, Richardson EA, O'Neill MA, Darvill AG, York WS, Ye ZH (2007) Arabidopsis irregular xylem8 and irregular xylem9: implications for the complexity of glucuronoxylan biosynthesis. Plant Cell 19:549-563. doi: 10.1105/tpc.106.049320
-
(2007)
Plant Cell
, vol.19
, pp. 549-563
-
-
Peña, M.J.1
Zhong, R.2
Zhou, G.K.3
Richardson, E.A.4
O'Neill, M.A.5
Darvill, A.G.6
York, W.S.7
Ye, Z.H.8
-
46
-
-
21344464046
-
Xylanases from fungi: Properties and industrial applications
-
10.1007/s00253-005-1904-7 15944805 10.1007/s00253-005-1904-7
-
Polizeli ML, Rizzatti AC, Monti R, Terenzi HF, Jorge JA, Amorim DS (2005) Xylanases from fungi: properties and industrial applications. Appl Microbiol Biotechnol 67:577-591. doi: 10.1007/s00253-005-1904-7
-
(2005)
Appl Microbiol Biotechnol
, vol.67
, pp. 577-591
-
-
Polizeli, M.L.1
Rizzatti, A.C.2
Monti, R.3
Terenzi, H.F.4
Jorge, J.A.5
Amorim, D.S.6
-
47
-
-
23144458473
-
InterProScan: Protein domains identifier
-
10.1093/nar/gki442 1160203 15980438 10.1093/nar/gki442
-
Quevillon E, Silventoinen V, Pillai S, Harte N, Mulder N, Apweiler R, Lopez R (2005) InterProScan: protein domains identifier. Nucleic Acids Res 33:W116-W120. doi: 10.1093/nar/gki442
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Quevillon, E.1
Silventoinen, V.2
Pillai, S.3
Harte, N.4
Mulder, N.5
Apweiler, R.6
Lopez, R.7
-
48
-
-
0028197264
-
Effect of residual lignin type and amount on biological bleaching of kraft pulp by Trametes versicolor
-
201495 16349246
-
Reid ID, Paice MG (1994) Effect of residual lignin type and amount on biological bleaching of kraft pulp by Trametes versicolor. Appl Environ Microbiol 60:1395-1400
-
(1994)
Appl Environ Microbiol
, vol.60
, pp. 1395-1400
-
-
Reid, I.D.1
Paice, M.G.2
-
49
-
-
0028872679
-
Response surface optimization of temperature and pH for the growth of Pachysolen tannophilus
-
10.1016/0141-0229(94)00046-T 10.1016/0141-0229(94)00046-T
-
Roebuck K, Brundin A, Johns M (1995) Response surface optimization of temperature and pH for the growth of Pachysolen tannophilus. Enzyme Microb Technol 17:75-78. doi: 10.1016/0141-0229(94)00046-T
-
(1995)
Enzyme Microb Technol
, vol.17
, pp. 75-78
-
-
Roebuck, K.1
Brundin, A.2
Johns, M.3
-
50
-
-
0042622380
-
SWISS-MODEL: An automated protein homology-modeling server
-
10.1093/nar/gkg520 168927 12824332 10.1093/nar/gkg520
-
Schwede T, Kopp J, Guex N, Peitsch MC (2003) SWISS-MODEL: an automated protein homology-modeling server. Nucleic Acids Res 31:3381-3385. doi: 10.1093/nar/gkg520
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3381-3385
-
-
Schwede, T.1
Kopp, J.2
Guex, N.3
Peitsch, M.C.4
-
51
-
-
33645653504
-
Generation, annotation, and analysis of an extensive Aspergillus niger EST collection
-
10.1186/1471-2180-6-7 1434744 16457709 10.1186/1471-2180-6-7
-
Semova N, Storms R, John T, Gaudet P, Ulycznyj P, Min XJ, Sun J, Butler G, Tsang A (2006) Generation, annotation, and analysis of an extensive Aspergillus niger EST collection. BMC Microbiol 6:7. doi: 10.1186/1471-2180-6-7
-
(2006)
BMC Microbiol
, vol.6
, pp. 7
-
-
Semova, N.1
Storms, R.2
John, T.3
Gaudet, P.4
Ulycznyj, P.5
Min, X.J.6
Sun, J.7
Butler, G.8
Tsang, A.9
-
52
-
-
0036210191
-
Biotechnology of microbial xylanases: Enzymology, molecular biology, and application
-
10.1080/07388550290789450 11958335 10.1080/07388550290789450
-
Subramaniyan S, Prema P (2002) Biotechnology of microbial xylanases: enzymology, molecular biology, and application. Crit Rev Biotechnol 22:33-64. doi: 10.1080/07388550290789450
-
(2002)
Crit Rev Biotechnol
, vol.22
, pp. 33-64
-
-
Subramaniyan, S.1
Prema, P.2
-
53
-
-
84856295638
-
Recombinant expression, activity screening, and functional characterization identifies three novel endo-1,4-β-glucanases that efficiently hydrolyse cellulosic substrates
-
10.1007/s00253-011-3419-8 21710260 10.1007/s00253-011-3419-8
-
Tambor JH, Ren H, Ushinsky S, Zheng Y, Riemens A, St-Francois C, Tsang A, Powlowski J, Storms R (2012) Recombinant expression, activity screening, and functional characterization identifies three novel endo-1,4-β-glucanases that efficiently hydrolyse cellulosic substrates. Appl Microbiol Biotechnol 93(1):203-214. doi: 10.1007/s00253-011-3419-8
-
(2012)
Appl Microbiol Biotechnol
, vol.93
, Issue.1
, pp. 203-214
-
-
Tambor, J.H.1
Ren, H.2
Ushinsky, S.3
Zheng, Y.4
Riemens, A.5
St-Francois, C.6
Tsang, A.7
Powlowski, J.8
Storms, R.9
-
55
-
-
24944528327
-
A family 10 Thermoascus aurantiacus xylanase utilizes arabinose decorations of xylan as significant substrate specificity determinants
-
10.1016/j.jmb.2005.07.051 16140328 10.1016/j.jmb.2005.07.051
-
Vardakou M, Flint J, Christakopoulos P, Lewis RJ, Gilbert HJ, Murray JW (2005) A family 10 Thermoascus aurantiacus xylanase utilizes arabinose decorations of xylan as significant substrate specificity determinants. J Mol Biol 352:1060-1067. doi: 10.1016/j.jmb.2005.07.051
-
(2005)
J Mol Biol
, vol.352
, pp. 1060-1067
-
-
Vardakou, M.1
Flint, J.2
Christakopoulos, P.3
Lewis, R.J.4
Gilbert, H.J.5
Murray, J.W.6
-
56
-
-
37549049016
-
Understanding the structural basis for substrate and inhibitor recognition in eukaryotic GH11 xylanases
-
10.1016/j.jmb.2007.11.007 18078955 10.1016/j.jmb.2007.11.007
-
Vardakou M, Dumon C, Murray JW, Christakopoulos P, Weiner DP, Juge N, Lewis RJ, Gilbert HJ, Flint JE (2008) Understanding the structural basis for substrate and inhibitor recognition in eukaryotic GH11 xylanases. J Mol Biol 375:1293-1305. doi: 10.1016/j.jmb.2007.11.007
-
(2008)
J Mol Biol
, vol.375
, pp. 1293-1305
-
-
Vardakou, M.1
Dumon, C.2
Murray, J.W.3
Christakopoulos, P.4
Weiner, D.P.5
Juge, N.6
Lewis, R.J.7
Gilbert, H.J.8
Flint, J.E.9
-
57
-
-
0028211360
-
Mutational and crystallographic analyses of the active site residues of the Bacillus circulans xylanase
-
10.1002/pro.5560030312 2142693 8019418 10.1002/pro.5560030312
-
Wakarchuk WW, Campbell RL, Sung WL, Davoodi J, Yaguchi M (1994) Mutational and crystallographic analyses of the active site residues of the Bacillus circulans xylanase. Protein Sci 3:467-475. doi: 10.1002/pro.5560030312
-
(1994)
Protein Sci
, vol.3
, pp. 467-475
-
-
Wakarchuk, W.W.1
Campbell, R.L.2
Sung, W.L.3
Davoodi, J.4
Yaguchi, M.5
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