The progression of peroxisomal degradation through autophagy requires peroxisomal division

Autophagy

Volumn 10, Issue 4, 2014, Pages 652-661

  Mao, Kai ^a   Liu, Xu ^a   Feng, Yuchen ^a   Klionsky, Daniel J ^a  

^a UNIVERSITY OF MICHIGAN   (United States)

Author keywords

Pexophagy; Phagophore; Stress; Vacuole; Yeast

Indexed keywords

AUTOPHAGY PROTEIN 11; AUTOPHAGY PROTEIN 36; GUANOSINE TRIPHOSPHATASE; GUANOSINE TRIPHOSPHATASE DNM1; GUANOSINE TRIPHOSPHATASE VPS1; PROTEIN; UNCLASSIFIED DRUG; DYNAMIN I; MEMBRANE PROTEIN;

ARTICLE; AUTOPHAGY; CARBON SOURCE; CELL ORGANELLE; CONTROLLED STUDY; CYTOSOL; IMMUNOBLOTTING; MITOCHONDRION; MITOPHAGY; NONHUMAN; PEROXISOMAL TARGETING SIGNAL; PEROXISOME; PEXOPHAGY; PROTEIN DEGRADATION; PROTEIN PHOSPHORYLATION; PROTEIN PROTEIN INTERACTION; SACCHAROMYCES CEREVISIAE; CYTOLOGY; METABOLISM; PHYSIOLOGY; SCHIZOSACCHAROMYCES; TRANSPORT AT THE CELLULAR LEVEL;

AUTOPHAGY; BIOLOGICAL TRANSPORT; DYNAMIN I; MEMBRANE PROTEINS; MITOCHONDRIA; ORGANELLES; PEROXISOMES; SCHIZOSACCHAROMYCES;

EID: 84898400392     PISSN: 15548627     EISSN: 15548635     Source Type: Journal    
DOI: 10.4161/auto.27852     Document Type: Article

References (31)

1. Motley AM, Hettema EH. Yeast peroxisomes multiply by growth and division. J Cell Biol 2007; 178:399-410; PMID:17646399; http://dx.doi.org/10.1083/jcb. 200702167
2. Schrader M, Bonekamp NA, Islinger M. Fission and proliferation of peroxisomes. Biochim Biophys Acta 2012; 1822:1343-57; PMID:22240198; http://dx.doi.org/10.1016/j.bbadis.2011.12.014
3. Hutchins MU, Veenhuis M, Klionsky DJ. Peroxisome degradation in Saccharomyces cerevisiae is dependent on machinery of macroautophagy and the Cvt pathway. J Cell Sci 1999; 112:4079-87; PMID:10547367
4. Sakai Y, Oku M, van der Klei IJ, Kiel JAKW. Pexophagy: autophagic degradation of peroxisomes. Biochim Biophys Acta 2006; 1763:1767-75; PMID:17005271; http://dx.doi.org/10.1016/j.bbamcr.2006.08.023
5. Xie Z, Klionsky DJ. Autophagosome formation: core machinery and adaptations. Nat Cell Biol 2007; 9:1102-9; PMID:17909521; http://dx.doi.org/10. 1038/ncb1007-1102
6. Mizushima N, Levine B, Cuervo AM, Klionsky DJ. Autophagy fights disease through cellular self-digestion. Nature 2008; 451:1069-75; PMID:18305538; http://dx.doi.org/10.1038/nature06639
7. Reggiori F, Klionsky DJ. Autophagic processes in yeast: mechanism, machinery and regulation. Genetics 2013; 194:341-61; PMID:23733851; http://dx.doi.org/10.1534/genetics.112.149013
8. Mijaljica D, Nazarko TY, Brumell JH, Huang W-P, Komatsu M, Prescott M, Simonsen A, Yamamoto A, Zhang H, Klionsky DJ, et al. Receptor protein complexes are in control of autophagy. Autophagy 2012; 8:1701-5; PMID:22874568; http://dx.doi.org/10.4161/auto.21332
9. Farré JC, Manjithaya R, Mathewson RD, Subramani S. PpAtg30 tags peroxisomes for turnover by selective autophagy. Dev Cell 2008; 14:365-76; PMID:18331717; http://dx.doi.org/10.1016/j.devcel.2007.12.011
10. Motley AM, Nuttall JM, Hettema EH. Pex3-anchored Atg36 tags peroxisomes for degradation in Saccharomyces cerevisiae. EMBO J 2012; 31:2852-68; PMID:22643220; http://dx.doi.org/10.1038/emboj.2012.151
11. Mao K, Wang K, Liu X, Klionsky DJ. The scaffold protein Atg11 recruits fission machinery to drive selective mitochondria degradation by autophagy. Dev Cell 2013; 26:9-18; PMID:23810512; http://dx.doi.org/10.1016/j.devcel.2013.05. 024
12. Kim J, Kamada Y, Stromhaug PE, Guan J, Hefner-Gravink A, Baba M, Scott SV, Ohsumi Y, Dunn WA Jr., Klionsky DJ. Cvt9/Gsa9 functions in sequestering selective cytosolic cargo destined for the vacuole. J Cell Biol 2001; 153:381-96; PMID:11309418; http://dx.doi.org/10.1083/jcb.153.2.381
13. Motley AM, Ward GP, Hettema EH. Dnm1p-dependent peroxisome fission requires Caf4p, Mdv1p and Fis1p. J Cell Sci 2008; 121:1633-40; PMID:18445678; http://dx.doi.org/10.1242/jcs.026344
14. Okamoto K, Shaw JM. Mitochondrial morphology and dynamics in yeast and multicellular eukaryotes. Annu Rev Genet 2005; 39:503-36; PMID:16285870; http://dx.doi.org/10.1146/annurev.genet.38.072902.093019
15. Vizeacoumar FJ, Vreden WN, Fagarasanu M, Eitzen GA, Aitchison JD, Rachubinski RA. The dyna-min-like protein Vps1p of the yeast Saccharomyces cerevisiae associates with peroxisomes in a Pex19p-dependent manner. J Biol Chem 2006; 281:12817-23; PMID:16520372; http://dx.doi.org/10.1074/jbc.M600365200
16. Kuravi K, Nagotu S, Krikken AM, Sjollema K, Deckers M, Erdmann R, Veenhuis M, van der Klei IJ. Dynamin-related proteins Vps1p and Dnm1p control peroxisome abundance in Saccharomyces cerevisiae. J Cell Sci 2006; 119:3994-4001; PMID:16968746; http://dx.doi.org/10.1242/jcs.03166
17. Mao K, Wang K, Zhao M, Xu T, Klionsky DJ. Two MAPK-signaling pathways are required for mitophagy in Saccharomyces cerevisiae. J Cell Biol 2011; 193:755-67; PMID:21576396; http://dx.doi.org/10.1083/jcb.201102092
18. Manivannan S, de Boer R, Veenhuis M, van der Klei IJ. Lumenal peroxisomal protein aggregates are removed by concerted fission and autophagy events. Autophagy 2013; 9:1044-56; PMID:23614977; http://dx.doi.org/10.4161/auto.24543
19. Sung MK, Huh WK. Bimolecular fluorescence complementation analysis system for in vivo detection of protein-protein interaction in Saccharomyces cerevisiae. Yeast 2007; 24:767-75; PMID:17534848; http://dx.doi.org/10.1002/yea. 1504
20. Kanki T, Klionsky DJ. Mitophagy in yeast occurs through a selective mechanism. J Biol Chem 2008; 283:32386-93; PMID:18818209; http://dx.doi.org/10. 1074/jbc.M802403200
21. Kanki T, Wang K, Cao Y, Baba M, Klionsky DJ. Atg32 is a mitochondrial protein that confers selectivity during mitophagy. Dev Cell 2009; 17:98-109; PMID:19619495; http://dx.doi.org/10.1016/j.devcel.2009.06.014
22. Farré JC, Burkenroad A, Burnett SF, Subramani S. Phosphorylation of mitophagy and pexophagy receptors coordinates their interaction with Atg8 and Atg11. EMBO Rep 2013; 14:441-9; PMID:23559066; http://dx.doi.org/10.1038/embor. 2013.40
23. Xie Z, Nair U, Klionsky DJ. Atg8 controls phagophore expansion during autophagosome formation. Mol Biol Cell 2008; 19:3290-8; PMID:18508918; http://dx.doi.org/10.1091/mbc.E07-12-1292
24. Baba M, Osumi M, Scott SV, Klionsky DJ, Ohsumi Y. Two distinct pathways for targeting proteins from the cytoplasm to the vacuole/lysosome. J Cell Biol 1997; 139:1687-95; PMID:9412464; http://dx.doi.org/10.1083/jcb.139.7.1687
25. Cheong H, Yorimitsu T, Reggiori F, Legakis JE, Wang C-W, Klionsky DJ. Atg17 regulates the magnitude of the autophagic response. Mol Biol Cell 2005; 16:3438-53; PMID:15901835; http://dx.doi.org/10.1091/mbc.E04-10-0894
26. Shintani T, Huang W-P, Stromhaug PE, Klionsky DJ. Mechanism of cargo selection in the cytoplasm to vacuole targeting pathway. Dev Cell 2002; 3:825-37; PMID:12479808; http://dx.doi.org/10.1016/S1534-5807(02)00373-8
27. Yorimitsu T, Klionsky DJ. Atg11 links cargo to the vesicle-forming machinery in the cytoplasm to vacuole targeting pathway. Mol Biol Cell 2005; 16:1593-605; PMID:15659643; http://dx.doi.org/10.1091/mbc.E04-11-1035
28. Friedman JR, Lackner LL, West M, DiBenedetto JR, Nunnari J, Voeltz GK. ER tubules mark sites of mitochondrial division. Science 2011; 334:358-62; PMID:21885730; http://dx.doi.org/10.1126/science.1207385
29. Robinson JS, Klionsky DJ, Banta LM, Emr SD. Protein sorting in Saccharomyces cerevisiae: isolation of mutants defective in the delivery and processing of multiple vacuolar hydrolases. Mol Cell Biol 1988; 8:4936-48; PMID:3062374
30. Mao K, Chew LH, Inoue-Aono Y, Cheong H, Nair U, Popelka H, Yip CK, Klionsky DJ. Atg29 phosphorylation regulates coordination of the Atg17-Atg31-Atg29 complex with the Atg11 scaffold during autophagy initiation. Proc Natl Acad Sci U S A 2013; 110:E2875-84; PMID:23858448; http://dx.doi.org/ 10.1073/pnas.1300064110
31. James P, Halladay J, Craig EA. Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast. Genetics 1996; 144:1425-36; PMID:8978031