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Volumn 13, Issue 5, 2014, Pages 772-781

Autoregulation of lin-4 microRNA transcription by RNA activation (RNAa) in C. elegans

Author keywords

Heterochronic; Lin 4; microRNA; miRNA; RNA activation; RNAa; Seam cell; Stem cell

Indexed keywords

MICRORNA; RNA; RNA POLYMERASE II; HELMINTH RNA; LIN-4 MICRORNA, C ELEGANS;

EID: 84897978883     PISSN: 15384101     EISSN: 15514005     Source Type: Journal    
DOI: 10.4161/cc.27679     Document Type: Article
Times cited : (42)

References (34)
  • 1
    • 0030970775 scopus 로고    scopus 로고
    • The cold shock domain protein LIN-28 controls developmental timing in C. Elegans and is regulated by the lin-4 RNA
    • PMID:9054503
    • Moss EG, Lee RC, Ambros V. The cold shock domain protein LIN-28 controls developmental timing in C. elegans and is regulated by the lin-4 RNA. Cell 1997; 88:637-46; PMID:9054503; http://dx.doi.org/10.1016/S0092-8674(00)81906-6
    • (1997) Cell , vol.88 , pp. 637-646
    • Moss, E.G.1    Lee, R.C.2    Ambros, V.3
  • 2
    • 0025989344 scopus 로고
    • Temporal regulation of lin-14 by the antagonistic action of two other heterochronic genes, lin-4 and lin-28
    • PMID:1916265
    • Arasu P, Wightman B, Ruvkun G. Temporal regulation of lin-14 by the antagonistic action of two other heterochronic genes, lin-4 and lin-28. Genes Dev 1991; 5:1825-33; PMID:1916265; http://dx.doi.org/10.1101/gad.5.10.1825
    • (1991) Genes Dev , vol.5 , pp. 1825-1833
    • Arasu, P.1    Wightman, B.2    Ruvkun, G.3
  • 3
    • 0031468448 scopus 로고    scopus 로고
    • Temporal pattern formation by heterochronic genes
    • PMID:9442909
    • Slack F, Ruvkun G. Temporal pattern formation by heterochronic genes. Annu Rev Genet 1997; 31:611-34; PMID:9442909; http://dx.doi.org/10.1146/annurev. genet.31.1.611
    • (1997) Annu Rev Genet , vol.31 , pp. 611-634
    • Slack, F.1    Ruvkun, G.2
  • 4
    • 78349307166 scopus 로고    scopus 로고
    • Regulation of lin-4 miRNA expression, organismal growth and development by a conserved RNA binding protein in C. Elegans
    • PMID:20937268
    • Bracht JR, Van Wynsberghe PM, Mondol V, Pasquinelli AE. Regulation of lin-4 miRNA expression, organismal growth and development by a conserved RNA binding protein in C. elegans. Dev Biol 2010; 348:210-21; PMID:20937268; http://dx.doi.org/10.1016/j.ydbio.2010.10.003
    • (2010) Dev Biol , vol.348 , pp. 210-221
    • Bracht, J.R.1    Van Wynsberghe, P.M.2    Mondol, V.3    Pasquinelli, A.E.4
  • 5
    • 58749096360 scopus 로고    scopus 로고
    • On the road to reading the RNA-interference code
    • PMID:19158785
    • Siomi H, Siomi MC. On the road to reading the RNA-interference code. Nature 2009; 457:396-404; PMID:19158785; http://dx.doi.org/10.1038/nature07754
    • (2009) Nature , vol.457 , pp. 396-404
    • Siomi, H.1    Siomi, M.C.2
  • 6
    • 84872533627 scopus 로고    scopus 로고
    • RNA interference in the nucleus: Roles for small RNAs in transcription, epigenetics and beyond
    • PMID:23329111
    • Castel SE, Martienssen RA. RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond. Nat Rev Genet 2013; 14:100-12; PMID:23329111; http://dx.doi.org/10.1038/nrg3355
    • (2013) Nat Rev Genet , vol.14 , pp. 100-112
    • Castel, S.E.1    Martienssen, R.A.2
  • 7
    • 38349169664 scopus 로고    scopus 로고
    • Mechanisms of post-transcriptional regulation by microRNAs: Are the answers in sight?
    • PMID:18197166
    • Filipowicz W, Bhattacharyya SN, Sonenberg N. Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight? Nat Rev Genet 2008; 9:102-14; PMID:18197166; http://dx.doi.org/10.1038/nrg2290
    • (2008) Nat Rev Genet , vol.9 , pp. 102-114
    • Filipowicz, W.1    Bhattacharyya, S.N.2    Sonenberg, N.3
  • 8
    • 15544363403 scopus 로고    scopus 로고
    • Specific and potent RNAi in the nucleus of human cells
    • PMID:15643423
    • Robb GB, Brown KM, Khurana J, Rana TM. Specific and potent RNAi in the nucleus of human cells. Nat Struct Mol Biol 2005; 12:133-7; PMID:15643423; http://dx.doi.org/10.1038/nsmb886
    • (2005) Nat Struct Mol Biol , vol.12 , pp. 133-137
    • Robb, G.B.1    Brown, K.M.2    Khurana, J.3    Rana, T.M.4
  • 9
    • 4344705410 scopus 로고    scopus 로고
    • Small interfering RNA-induced transcriptional gene silencing in human cells
    • PMID:15297624
    • Morris KV, Chan SW, Jacobsen SE, Looney DJ. Small interfering RNA-induced transcriptional gene silencing in human cells. Science 2004; 305:1289-92; PMID:15297624; http://dx.doi.org/10.1126/science.1101372
    • (2004) Science , vol.305 , pp. 1289-1292
    • Morris, K.V.1    Chan, S.W.2    Jacobsen, S.E.3    Looney, D.J.4
  • 10
    • 77953961505 scopus 로고    scopus 로고
    • Small regulatory RNAs inhibit RNA polymerase II during the elongation phase of transcription
    • PMID:20543824
    • Guang S, Bochner AF, Burkhart KB, Burton N, Pavelec DM, Kennedy S. Small regulatory RNAs inhibit RNA polymerase II during the elongation phase of transcription. Nature 2010; 465:1097-101; PMID:20543824; http://dx.doi.org/10. 1038/nature09095
    • (2010) Nature , vol.465 , pp. 1097-1101
    • Guang, S.1    Bochner, A.F.2    Burkhart, K.B.3    Burton, N.4    Pavelec, D.M.5    Kennedy, S.6
  • 12
    • 33847081733 scopus 로고    scopus 로고
    • Activating gene expression in mammalian cells with promoter-targeted duplex RNAs
    • PMID:17259978
    • Janowski BA, Younger ST, Hardy DB, Ram R, Huffman KE, Corey DR. Activating gene expression in mammalian cells with promoter-targeted duplex RNAs. Nat Chem Biol 2007; 3:166-73; PMID:17259978; http://dx.doi.org/10.1038/ nchembio860
    • (2007) Nat Chem Biol , vol.3 , pp. 166-173
    • Janowski, B.A.1    Younger, S.T.2    Hardy, D.B.3    Ram, R.4    Huffman, K.E.5    Corey, D.R.6
  • 14
    • 78650448697 scopus 로고    scopus 로고
    • Activation of LDL receptor expression by small RNAs complementary to a noncoding transcript that overlaps the LDLR promoter
    • PMID:21168770
    • Matsui M, Sakurai F, Elbashir S, Foster DJ, Manoharan M, Corey DR. Activation of LDL receptor expression by small RNAs complementary to a noncoding transcript that overlaps the LDLR promoter. Chem Biol 2010; 17:1344-55; PMID:21168770; http://dx.doi.org/10.1016/j.chembiol.2010.10.009
    • (2010) Chem Biol , vol.17 , pp. 1344-1355
    • Matsui, M.1    Sakurai, F.2    Elbashir, S.3    Foster, D.J.4    Manoharan, M.5    Corey, D.R.6
  • 17
    • 67649556287 scopus 로고    scopus 로고
    • An elegant miRror: MicroRNAs in stem cells, developmental timing and cancer
    • PMID:19340450
    • Nimmo RA, Slack FJ. An elegant miRror: microRNAs in stem cells, developmental timing and cancer. Chromosoma 2009; 118:405-18; PMID:19340450; http://dx.doi.org/10.1007/s00412-009-0210-z
    • (2009) Chromosoma , vol.118 , pp. 405-418
    • Nimmo, R.A.1    Slack, F.J.2
  • 18
    • 0032449075 scopus 로고    scopus 로고
    • Heterochronic genes in development and evolution
    • PMID:9924779
    • Slack F, Ruvkun G. Heterochronic genes in development and evolution. Biol Bull 1998; 195:375-6; PMID:9924779; http://dx.doi.org/10.2307/1543152
    • (1998) Biol Bull , vol.195 , pp. 375-376
    • Slack, F.1    Ruvkun, G.2
  • 19
    • 0033935425 scopus 로고    scopus 로고
    • Control of developmental timing in Caenorhabditis elegans
    • PMID:10889059
    • Ambros V. Control of developmental timing in Caenorhabditis elegans. Curr Opin Genet Dev 2000; 10:428-33; PMID:10889059; http://dx.doi.org/10.1016/S0959- 437X(00)00108-8
    • (2000) Curr Opin Genet Dev , vol.10 , pp. 428-433
    • Ambros, V.1
  • 20
    • 0028269973 scopus 로고
    • Heterochronic genes and the temporal control of C. Elegans development
    • PMID:8029828
    • Ambros V, Moss EG. Heterochronic genes and the temporal control of C. elegans development. Trends Genet 1994; 10:123-7; PMID:8029828; http://dx.doi.org/10.1016/0168-9525(94)90213-5
    • (1994) Trends Genet , vol.10 , pp. 123-127
    • Ambros, V.1    Moss, E.G.2
  • 21
    • 0033153413 scopus 로고    scopus 로고
    • The timing of lin-4 RNA accumulation controls the timing of postembryonic developmental events in Caenorhabditis elegans
    • PMID:10364429
    • Feinbaum R, Ambros V. The timing of lin-4 RNA accumulation controls the timing of postembryonic developmental events in Caenorhabditis elegans. Dev Biol 1999; 210:87-95; PMID:10364429; http://dx.doi.org/10.1006/dbio.1999.9272
    • (1999) Dev Biol , vol.210 , pp. 87-95
    • Feinbaum, R.1    Ambros, V.2
  • 22
    • 51949108357 scopus 로고    scopus 로고
    • The FLYWCH transcription factors FLH-1, FLH-2, and FLH-3 repress embryonic expression of microRNA genes in C. Elegans
    • PMID:18794349
    • Ow MC, Martinez NJ, Olsen PH, Silverman HS, Barrasa MI, Conradt B, Walhout AJM, Ambros V. The FLYWCH transcription factors FLH-1, FLH-2, and FLH-3 repress embryonic expression of microRNA genes in C. elegans. Genes Dev 2008; 22:2520-34; PMID:18794349; http://dx.doi.org/10.1101/gad.1678808
    • (2008) Genes Dev , vol.22 , pp. 2520-2534
    • Ow, M.C.1    Martinez, N.J.2    Olsen, P.H.3    Silverman, H.S.4    Barrasa, M.I.5    Conradt, B.6    Walhout, A.J.M.7    Ambros, V.8
  • 23
    • 0027751663 scopus 로고
    • The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
    • PMID:8252621
    • Lee RC, Feinbaum RL, Ambros V. The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 1993; 75:843-54; PMID:8252621; http://dx.doi.org/10.1016/0092-8674(93)90529-Y
    • (1993) Cell , vol.75 , pp. 843-854
    • Lee, R.C.1    Feinbaum, R.L.2    Ambros, V.3
  • 24
    • 28444441562 scopus 로고    scopus 로고
    • Post-embryonic expression of C. Elegans microRNAs belonging to the lin-4 and let-7 families in the hypodermis and the reproductive system
    • PMID:16217741
    • Esquela-Kerscher A, Johnson SM, Bai L, Saito K, Partridge J, Reinert KL, Slack FJ. Post-embryonic expression of C. elegans microRNAs belonging to the lin-4 and let-7 families in the hypodermis and the reproductive system. Dev Dyn 2005; 234:868-77; PMID:16217741; http://dx.doi.org/10.1002/dvdy.20572
    • (2005) Dev Dyn , vol.234 , pp. 868-877
    • Esquela-Kerscher, A.1    Johnson, S.M.2    Bai, L.3    Saito, K.4    Partridge, J.5    Reinert, K.L.6    Slack, F.J.7
  • 25
    • 0019509303 scopus 로고
    • Mutations that lead to reiterations in the cell lineages of C. Elegans
    • PMID:7237544
    • Chalfie M, Horvitz HR, Sulston JE. Mutations that lead to reiterations in the cell lineages of C. elegans. Cell 1981; 24:59-69; PMID:7237544; http://dx.doi.org/10.1016/0092-8674(81)90501-8
    • (1981) Cell , vol.24 , pp. 59-69
    • Chalfie, M.1    Horvitz, H.R.2    Sulston, J.E.3
  • 26
    • 0019531209 scopus 로고
    • Abnormal cell lineages in mutants of the nematode Caenorhabditis elegans
    • PMID:7014288
    • Sulston JE, Horvitz HR. Abnormal cell lineages in mutants of the nematode Caenorhabditis elegans. Dev Biol 1981; 82:41-55; PMID:7014288; http://dx.doi.org/10.1016/0012-1606(81)90427-9
    • (1981) Dev Biol , vol.82 , pp. 41-55
    • Sulston, J.E.1    Horvitz, H.R.2
  • 27
    • 0027730383 scopus 로고
    • Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. Elegans
    • PMID:8252622
    • Wightman B, Ha I, Ruvkun G. Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. elegans. Cell 1993; 75:855-62; PMID:8252622; http://dx.doi.org/10.1016/0092- 8674(93)90530-4
    • (1993) Cell , vol.75 , pp. 855-862
    • Wightman, B.1    Ha, I.2    Ruvkun, G.3
  • 28
    • 0029801668 scopus 로고    scopus 로고
    • A bulged lin-4/lin-14 RNA duplex is sufficient for Caenorhabditis elegans lin-14 temporal gradient formation
    • PMID:8957004
    • Ha I, Wightman B, Ruvkun G. A bulged lin-4/lin-14 RNA duplex is sufficient for Caenorhabditis elegans lin-14 temporal gradient formation. Genes Dev 1996; 10:3041-50; PMID:8957004; http://dx.doi.org/10.1101/gad.10.23.3041
    • (1996) Genes Dev , vol.10 , pp. 3041-3050
    • Ha, I.1    Wightman, B.2    Ruvkun, G.3
  • 29
    • 57149116346 scopus 로고    scopus 로고
    • Genome-scale spatiotemporal analysis of Caenorhabditis elegans microRNA promoter activity
    • PMID:18981266
    • Martinez NJ, Ow MC, Reece-Hoyes JS, Barrasa MI, Ambros VR, Walhout AJM. Genome-scale spatiotemporal analysis of Caenorhabditis elegans microRNA promoter activity. Genome Res 2008; 18:2005-15; PMID:18981266; http://dx.doi.org/10. 1101/gr.083055.108
    • (2008) Genome Res , vol.18 , pp. 2005-2015
    • Martinez, N.J.1    Ow, M.C.2    Reece-Hoyes, J.S.3    Barrasa, M.I.4    Ambros, V.R.5    Walhout, A.J.M.6
  • 30
    • 84863005508 scopus 로고    scopus 로고
    • Autoregulation of microRNA biogenesis by let-7 and Argonaute
    • PMID:22722835
    • Zisoulis DG, Kai ZS, Chang RK, Pasquinelli AE. Autoregulation of microRNA biogenesis by let-7 and Argonaute. Nature 2012; 486:541-4; PMID:22722835
    • (2012) Nature , vol.486 , pp. 541-544
    • Zisoulis, D.G.1    Kai, Z.S.2    Chang, R.K.3    Pasquinelli, A.E.4
  • 32
    • 84876177255 scopus 로고    scopus 로고
    • A pseudogene long-noncoding-RNA network regulates PTEN transcription and translation in human cells
    • PMID:23435381
    • Johnsson P, Ackley A, Vidarsdottir L, Lui W-O, Corcoran M, Grandér D, Morris KV. A pseudogene long-noncoding-RNA network regulates PTEN transcription and translation in human cells. Nat Struct Mol Biol 2013; 20:440-6; PMID:23435381; http://dx.doi.org/10.1038/nsmb.2516
    • (2013) Nat Struct Mol Biol , vol.20 , pp. 440-446
    • Johnsson, P.1    Ackley, A.2    Vidarsdottir, L.3    Lui, W.-O.4    Corcoran, M.5    Grandér, D.6    Morris, K.V.7
  • 33
    • 57149110631 scopus 로고    scopus 로고
    • Bidirectional transcription directs both transcriptional gene activation and suppression in human cells
    • PMID:19008947
    • Morris KV, Santoso S, Turner A-M, Pastori C, Hawkins PG. Bidirectional transcription directs both transcriptional gene activation and suppression in human cells. PLoS Genet 2008; 4:e1000258; PMID:19008947; http://dx.doi.org/10. 1371/journal.pgen.1000258
    • (2008) PLoS Genet , vol.4
    • Morris, K.V.1    Santoso, S.2    Turner, A.-M.3    Pastori, C.4    Hawkins, P.G.5
  • 34
    • 77649225979 scopus 로고    scopus 로고
    • Genome-wide identification of binding sites defines distinct functions for Caenorhabditis elegans PHA-4/FOXA in development and environmental response
    • PMID:20174564
    • Zhong M, Niu W, Lu ZJ, Sarov M, Murray JI, Janette J, Raha D, Sheaffer KL, Lam HYK, Preston E, et al. Genome-wide identification of binding sites defines distinct functions for Caenorhabditis elegans PHA-4/FOXA in development and environmental response. PLoS Genet 2010; 6:e1000848; PMID:20174564; http://dx.doi.org/10.1371/journal.pgen.1000848
    • (2010) PLoS Genet , vol.6
    • Zhong, M.1    Niu, W.2    Lu, Z.J.3    Sarov, M.4    Murray, J.I.5    Janette, J.6    Raha, D.7    Sheaffer, K.L.8    Lam, H.Y.K.9    Preston, E.10


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