Intradimer/intermolecular interactions suggest autoinhibition mechanism in endophilin A1

Journal of the American Chemical Society

Volumn 136, Issue 12, 2014, Pages 4557-4564

  Chen, Zhiming ^a   Chang, Ken ^a   Capraro, Benjamin R ^a   Zhu, Chen ^a   Hsu, Chih Jung ^a   Baumgart, Tobias ^a  

^a UNIVERSITY OF PENNSYLVANIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DIMERS; DISSOCIATION; ENERGY TRANSFER; ENTHALPY; KINETICS; LIGANDS; PROTEINS;

ACTIVATION ENTHALPIES; DIMER DISSOCIATION; DISSOCIATION KINETICS; FULL-LENGTH PROTEINS; MEMBRANE INTERACTIONS; PROTEIN CONCENTRATIONS; RESONANCE ENERGY TRANSFER; TEMPERATURE DEPENDENCE;

DIMERIZATION;

ENDOPHILIN; ENDOPHILIN A1; UNCLASSIFIED DRUG; 2-ACYLGLYCEROPHOSPHATE ACYLTRANSFERASE; ACYLTRANSFERASE;

ARTICLE; DIMERIZATION; DISSOCIATION; ENTHALPY; FLUORESCENCE RESONANCE ENERGY TRANSFER; MOLECULAR INTERACTION; TEMPERATURE DEPENDENCE; ANIMAL; ANTAGONISTS AND INHIBITORS; CHEMICAL STRUCTURE; CHEMISTRY; GENETICS; KINETICS; METABOLISM; MUTATION; PROTEIN MULTIMERIZATION; PROTEIN QUATERNARY STRUCTURE; PROTEIN TERTIARY STRUCTURE; RAT; TEMPERATURE;

ACYLTRANSFERASES; ANIMALS; KINETICS; MODELS, MOLECULAR; MUTATION; PROTEIN MULTIMERIZATION; PROTEIN STRUCTURE, QUATERNARY; PROTEIN STRUCTURE, TERTIARY; RATS; TEMPERATURE;

EID: 84897066569     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja411607b     Document Type: Article

References (52)

1. Ringstad, N.; Gad, H.; Low, P.; Di Paolo, G.; Brodin, L.; Shupliakov, O.; De Camilli, P. Neuron 1999, 24, 143
2. Llobet, A.; Gallop, J. L.; Burden, J. J. E.; Camdere, G.; Chandra, P.; Vallis, Y.; Hopkins, C. R.; Lagnado, L.; McMahon, H. T. J. Neurosci. 2011, 31, 8512
3. Sundborger, A.; Soderblom, C.; Vorontsova, O.; Evergren, E.; Hinshaw, J. E.; Shupliakov, O. J. Cell Sci. 2011, 124, 133
4. Ferguson, S.; Raimondi, A.; Paradise, S.; Shen, H. Y.; Mesaki, K.; Ferguson, A.; Destaing, O.; Ko, G.; Takasaki, J.; Cremona, O.; O'Toole, E.; De Camilli, P. Dev. Cell. 2009, 17, 811
5. Bai, J. H.; Hu, Z. T.; Dittman, J. S.; Pym, E. C. G.; Kaplan, J. M. Cell 2010, 143, 430
6. Zhu, C.; Das, S. L.; Baumgart, T. Biophys. J. 2012, 102, 1837
7. Bhatia, V. K.; Madsen, K. L.; Bolinger, P. Y.; Kunding, A.; Hedegard, P.; Gether, U.; Stamou, D. EMBO J. 2009, 28, 3303
8. Farsad, K.; Ringstad, N.; Takei, K.; Floyd, S. R.; Rose, K.; De Camilli, P. J. Cell. Biol. 2001, 155, 193
9. Gallop, J. L.; Jao, C. C.; Kent, H. M.; Butler, P. J. G.; Evans, P. R.; Langen, R.; T McMahon, H. EMBO J. 2006, 25, 2898
10. Masuda, M.; Mochizuki, N. Semin. Cell Dev. Biol. 2010, 21, 391
11. Peter, B. J.; Kent, H. M.; Mills, I. G.; Vallis, Y.; Butler, P. J. G.; Evans, P. R.; McMahon, H. T. Science 2004, 303, 495
12. Boucrot, E.; Pick, A.; Camdere, G.; Liska, N.; Evergren, E.; McMahon, H. T.; Kozlov, M. M. Cell 2012, 149, 124
13. Masuda, M.; Takeda, S.; Sone, M.; Ohki, T.; Mori, H.; Kamioka, Y.; Mochizuki, N. EMBO J. 2006, 25, 2889
14. Frost, A.; Unger, V. M.; De Camilli, P. Cell 2009, 137, 191
15. Baumgart, T.; Capraro, B. R.; Zhu, C.; Das, S. L. Annu. Rev. Phys. Chem. 2011, 62, 483.
16. Schmidt, A.; Wolde, M.; Thiele, C.; Fest, W.; Kratzin, H.; Podtelejnikov, A. V.; Witke, W.; Huttner, W. B.; Soling, H. D. Nature 1999, 401, 133
17. Ringstad, N.; Nemoto, Y.; DeCamilli, P. Proc. Natl. Acad. Sci. U. S. A. 1997, 94, 8569
18. Milosevic, I.; Giovedi, S.; Lou, X. L.; Raimondi, A.; Collesi, C.; Shen, H. Y.; Paradise, S.; O'Toole, E.; Ferguson, S.; Cremona, O.; De Camilli, P. Neuron 2011, 72, 587
19. Vázquez, F. X.; Unger, V. M.; Voth, G. A. Biophys. J. 2013, 104, 396
20. Wang, Q.; Kaan, H. Y. K.; Hooda, R. N.; Goh, S. L.; Sondermann, H. Structure 2008, 16, 1574
21. Meinecke, M.; Boucrot, E.; Camdere, G.; Hon, W. C.; Mittal, R.; McMahon, H. T. J. Biol. Chem. 2013, 288, 6651
22. Ozeki, S.; Kato, T.; Holtzer, M. E.; Holtzer, A. Biopolymers 1991, 31, 957
23. Merickel, S. K.; Sanders, E. R.; Vázquez-Ibar, J. L.; Johnson, R. C. Biochemistry 2002, 41, 5788
24. Moore, J. M. R.; Patapoff, T. W.; Cromwell, M. E. M. Biochemistry 1999, 38, 13960
25. Kitano, H.; Maeda, Y.; Okubo, T. Biophys. Chem. 1989, 33, 47
26. Maeda, H.; Engel, J.; Schramm, H. J. Eur. J. Biochem. 1976, 69, 133
27. Bosshard, H. R.; Durr, E.; Hitz, T.; Jelesarov, I. Biochemistry 2001, 40, 3544
28. Parr, G. R.; Hammes, G. G. Biochemistry 1976, 15, 857
29. Schreiber, G.; Haran, G.; Zhou, H. X. Chem. Rev. 2009, 109, 839
30. Capraro, B. R.; Shi, Z.; Wu, T.; Chen, Z.; Dunn, J. M.; Rhoades, E.; Baumgart, T. J. Biol. Chem. 2013, 288, 12533
31. Nooren, I. M. A.; Thornton, J. M. J. Mol. Biol. 2003, 325, 991
32. Dey, S.; Pal, A.; Chakrabarti, P.; Janin, J. J. Mol. Biol. 2010, 398, 146
33. Wendt, H.; Berger, C.; Baici, A.; Thomas, R. M.; Bosshard, H. R. Biochemistry 1995, 34, 4097
34. Jonsson, T.; Waldburger, C. D.; Sauer, R. T. Biochemistry 1996, 35, 4795
35. Merzlyakov, M.; Chen, L.; Hristova, K. J. Membr. Biol. 2007, 215, 93
36. Jia, H. F.; Satumba, W. J.; Bidwell, G. L.; Mossing, M. C. J. Mol. Biol. 2005, 350, 919
37. Schreiber, G. Curr. Opin. Struct. Biol. 2002, 12, 41
38. Myers, J. K.; Pace, C. N.; Scholtz, J. M. Protein Sci. 1995, 4, 2138
39. Zhou, H. X. Q. Rev. Biophys. 2010, 43, 219
40. Janin, J. Biochimie 1995, 77, 497
41. Ross, P. D.; Subramanian, S. Biochemistry 1981, 20, 3096
42. Krissinel, E.; Henrick, K. J. Mol. Biol. 2007, 372, 774
43. Neet, K. E.; Timm, D. E. Protein Sci. 1994, 3, 2167
44. Darke, P. L.; Jordan, S. P.; Hall, D. L.; Zugay, J. A.; Shafer, J. A.; Kuo, L. C. Biochemistry 1994, 33, 98
45. Grant, S. K.; Deckman, I. C.; Culp, J. S.; Minnich, M. D.; Brooks, I. S.; Hensley, P.; Debouck, C.; Meek, T. D. Biochemistry 1992, 31, 9491
46. Wang, J. H.; Robinson, C. V.; Edelman, I. S. J. Am. Chem. Soc. 1953, 75, 466
47. Pruppach, H. J. Chem. Phys. 1972, 56, 101
48. Qin, S.; Pang, X. D.; Zhou, H. X. Structure 2011, 19, 1744
49. Lyskov, S.; Chou, F.-C.; Conchúir, S. Ó.; Der, B. S.; Drew, K.; Kuroda, D.; Xu, J.; Weitzner, B. D.; Renfrew, P. D.; Sripakdeevong, P.; Borgo, B.; Havranek, J. J.; Kuhlman, B.; Kortemme, T.; Bonneau, R.; Gray, J. J.; Das, R. PLoS ONE 2013, 8, e63906
50. Lyskov, S.; Gray, J. J. Nucleic Acids Res. 2008, 36, W233
51. Ferraro, E.; Peluso, D.; Via, A.; Ausiello, G.; Helmer-Citterich, M. Nucleic Acids Res. 2007, 35, W451
52. Mim, C.; Cui, H. S.; Gawronski-Salerno, J. A.; Frost, A.; Lyman, E.; Voth, G. A.; Unger, V. M. Cell 2012, 149, 137