Molecular cloning and characterization of a putative proline dehydrogenase gene in the Colorado potato beetle, Leptinotarsa decemlineata

Insect Science

Volumn 21, Issue 2, 2014, Pages 147-158

  Wan, Pin Jun ^a   Lü, Dong ^a   Guo, Wen Chao ^b   Ahmat, Tursun ^b   Yang, Lu ^a   Mu, Li Li ^a   Li, Guo Qing ^a  

^a NANJING AGRICULTURAL UNIVERSITY   (China)

^b INSTITUTE OF MICROBIOLOGY   (China)

Author keywords

3 UTR; Alternative polyadenylation; Isoform; RNA interference; Temporal expression

Indexed keywords

COMPLEMENTARY DNA; PROLINE DEHYDROGENASE;

AMINO ACID SEQUENCE; ANIMAL; BEETLE; CHINA; DIAPAUSE; GENETICS; INSECT; LARVA; METABOLISM; MOLECULAR CLONING; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYSIOLOGY; POLYADENYLATION;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; BEETLES; CHINA; CLONING, MOLECULAR; DIAPAUSE, INSECT; DNA, COMPLEMENTARY; LARVA; MOLECULAR SEQUENCE DATA; POLYADENYLATION; PROLINE OXIDASE; PUPA;

EID: 84897029319     PISSN: 16729609     EISSN: 17447917     Source Type: Journal    
DOI: 10.1111/1744-7917.12034     Document Type: Article

References (52)

1. Akgül, B. and Tu, C. (2004) Pentobarbital-mediated regulation of alternative polyadenylation in Drosophila glutathione S-transferase D21 mRNAs. Journal of Biological Chemistry, 279, 4027-4033.
2. Alyokhin, A. (2009) Colorado potato beetle management on potatoes: Current challenges and future prospects. Fruit, Vegetable and Cereal Science and Biotechnology, 3, 10-19.
3. Alyokhin, A., Baker, M., Mota-Sanchez, D., Dively, G. and Grafius, E. (2008) Colorado potato beetle resistance to insecticides. American Journal of Potato Research, 85, 395-413.
4. Andreassi, C. and Riccio, A. (2009) To localize or not to localize: mRNA fate is in 3′UTR ends. Trends Cell Biology, 19, 465-474.
5. Baker, M., Ferro, D. and Porter, A. (2001) Invasions on large and small scales: Management of a well-established crop pest, the Colorado potato beetle. Biological Invasions, 3, 295-306.
6. Boiteau, G., Alyokhin, A. and Ferro, D. (2003) The Colorado potato beetle in movement. Canadian Entomologist, 135, 1-22.
7. Candy, D., Becker, A. and Wegener, G. (1997) Coordination and integration of metabolism in insect flight. Comparative Biochemistry and Physiology B, 117, 497-512.
8. Clark, A., Eisen, M., Smith, D., Bergman, C., Oliver, B., Markow, T., Kaufman, T., Kellis, M., Gelbart, W. and Iyer, V. (2007) Evolution of genes and genomes on the Drosophila phylogeny. Nature, 450, 203-218.
9. Darriba, D., Taboada, G.L., Doallo, R. and Posada, D. (2011) ProtTest 3: Fast selection of best-fit models of protein evolution. Bioinformatics, 27, 1164-1165.
10. De Kort, C. (1990) Thirty-five years of diapause research with the Colorado potato beetle. Entomologia Experimentalis et Applicata, 56, 1-13.
11. De Kort, C., Bartelink, A. and Schuurmans, R. (1973) The significance of L-proline for oxidative metabolism in the flight muscles of the Colorado beetle, Leptinotarsa decemlineata. Insect Biochemistry, 3, 11-17.
12. Flavell, S., Kim, T., Gray, J., Harmin, D., Hemberg, M., Hong, E., Markenscoff-Papadimitriou, E., Bear, D. and Greenberg, M. (2008) Genome-wide analysis of MEF2 transcriptional program reveals synaptic target genes and neuronal activity-dependent polyadenylation site selection. Neuron, 60, 1022-1038.
13. Follett, P., Cantelo, W. and Roderick, G. (1996) Local dispersal of overwintered Colorado potato beetle (Chrysomelidae: Coleoptera) determined by mark and recapture. Environmental Entomology, 25, 1304-1311.
14. Gäde, G. (2004) Flight or fight-the need for adipokinetic hormones. International Congress Series, 1275, 134-140.
15. Gäde, G. and Auerswald, L. (2000) Flight substrates and their regulation by a member of the AKH/RPCH family of neuropeptides in Cerambycidae. Journal of Insect Physiology, 46, 1575-1584.
16. Gäde, G. and Auerswald, L. (2002) Beetles' choice-proline for energy output: Control by AKHs. Comparative Biochemistry and Physiology B, 132, 117-129.
17. Gäde, G. and Auerswald, L. (2003) Mode of action of neuropeptides from the adipokinetic hormone family. General and Comparative Endocrinology, 132, 10-20.
18. Giulivi, C., Ross-Inta, C., Horton, A. and Luckhart, S. (2008) Metabolic pathways in Anopheles stephensi mitochondria. Biochemical Journal, 415, 309-316.
19. Guindon, S., Dufayard, J.-F., Lefort, V., Anisimova, M., Hordijk, W. and Gascuel, O. (2010) New algorithms and methods to estimate maximum-likelihood phylogenies: Assessing the performance of PhyML 3.0. Systematic Biology, 59, 307-321.
20. Hayward, D., Delaney, S., Campbell, H., Ghysen, A., Benzer, S., Kasprzak, A., Cotsell, J., Young, I. and Miklos, G. (1993) The sluggish-A gene of Drosophila melanogaster is expressed in the nervous system and encodes proline oxidase, a mitochondrial enzyme involved in glutamate biosynthesis. Proceedings of the National Academy of Sciences of the United States of America, 90, 2979-2983.
21. Holt, R., Subramanian, G., Halpern, A., Sutton, G., Charlab, R., Nusskern, D., Wincker, P., Clark, A., Ribeiro, J. and Wides, R. (2002) The genome sequence of the malaria mosquito Anopheles gambiae. Science, 298, 129-149.
22. Jacquet, H., Raux, G., Thibaut, F., Hecketsweiler, B., Houy, E., Demilly, C., Haouzir, S., Allio, G., Fouldrin, G. and Drouin, V. (2002) PRODH mutations and hyperprolinemia in a subset of schizophrenic patients. Human Molecular Genetics, 11, 2243-2249.
23. Jiang, W.H., Guo, W.C., Lu, W.P., Shi, X.Q., Xiong, M.H. and Li, G.Q. (2011) Target site insensitivity mutations in the AChE and LdVssc1 confer resistance 3 to pyrethroids and carbamates in Leptinotarsa decemlineata in northern 4 Xinjiang Uygur autonomous region. Pesticide Biochemistry and Physiology, 100, 74-81.
24. Jiang, W.H., Lu, W.P., Guo, W.C., Xia, Z.H., Fu, W.J. and Li, G.Q. (2012) Chlorantraniliprole susceptibility in Leptinotarsa decemlineata in the north Xinjiang Uygur Autonomous Region in China. Journal of Economic Entomology, 105, 549-554.
25. Jiang, W.H., Wang, Z.T., Xiong, M.H., Lu, W.P., Liu, P., Guo, W.C. and Li, G.Q. (2010) Insecticide resistance status of Colorado potato beetle (Coleoptera: Chrysomelidae) adults in northern Xinjiang Uygur autonomous region. Journal of Economic Entomology, 103, 1365-1371.
26. Kornfeld, K., Saint, R., Beachy, P., Harte, P., Peattie, D. and Hogness, D. (1989) Structure and expression of a family of Ultrabithorax mRNAs generated by alternative splicing and polyadenylation in Drosophila. Genes and Development, 3, 243-258.
27. Lu, D., Yang, J. and Li, G.Q. (2010) Preliminary study on techniques for bacterial expression of dsRNA from proline hydrogenase gene in Leptinotarsa decemlineata (Say). Agrochemicals, 49, 571-573.
28. Lu, W.P., Shi, X.Q., Guo, W.C., Jiang, W.H., Xia, Z.H., Fu, W.J. and Li, G.Q. (2011) Susceptibilities of Leptinotarsa decemlineata (Say) in the north xinjiang Uygur autonomous region in China to two biopesticides and three conventional insecticides. Journal of Agricultural and Urban Entomology, 27, 61-73.
29. Lutz, C. (2008) Alternative polyadenylation: A twist on mRNA 3′ end formation. ACS Chemical Biology, 3, 609-617.
30. Marchler-Bauer, A., Lu, S., Anderson, J.B., Chitsaz, F., Derbyshire, M.K., DeWeese-Scott, C., Fong, J.H., Geer, L.Y., Geer, R.C., Gonzales, N.R., Gwadz, M., Hurwitz, D.I., Jackson, J.D., Ke, Z., Lanczycki, C.J., Lu, F., Marchler, G.H., Mullokandov, M., Omelchenko, M.V., Robertson, C.L., Song, J.S., Thanki, N., Yamashita, R.A., Zhang, D., Zhang, N., Zheng, C. and Bryant, S.H. (2011) CDD: A conserved domain database for the functional annotation of proteins. Nucleic Acids Research, 39, D225-D229.
31. Martin, K. and Ephrussi, A. (2009) mRNA localization: Gene expression in the spatial dimension. Cell, 136, 719-730.
32. Mayr, C. and Bartel, D. (2009) Widespread shortening of 3′ UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells. Cell, 138, 673-684.
33. Micheu, S., Crailsheim, K. and Leonhard, B. (2000) Importance of proline and other amino acids during honeybee flight. Amino Acids, 18, 157-175.
34. Moore, M. and Proudfoot, N. (2009) Pre-mRNA processing reaches back to transcription and ahead to translation. Cell, 136, 688-700.
35. Mordue, W. and De Kort, C. (1978) Energy substrates for flight in the Colorado beetle, Leptinotarsa decemlineata Say. Journal of Insect Physiology, 24, 221-224.
36. Muro, E., Herrington, R., Janmohamed, S., Frelin, C., Andrade-Navarro, M. and Iscove, N. (2008) Identification of gene 3′ ends by automated EST cluster analysis. Proceedings of the National Academy of Sciences of the United States of America, 105, 20286-20290.
37. Nene, V., Wortman, J., Lawson, D., Haas, B., Kodira, C., Tu, Z., Loftus, B., Xi, Z., Megy, K. and Grabherr, M. (2007) Genome sequence of Aedes aegypti, a major arbovirus vector. Science, 316, 1718-1723.
38. Noronha, C. and Cloutier, C. (1999) Ground and aerial movement of adult Colorado potato beetle (Coleoptera: Chrysomelidae) in a univoltine population. Canadian Entomologist, 131, 521-538.
39. Ranz, J., Maurin, D., Chan, Y., von Grotthuss, M., Hillier, L., Roote, J., Ashburner, M. and Bergman, C. (2007) Principles of genome evolution in the Drosophila melanogaster species group. PLoS Biology, 5, e152.
40. Richards, S., Gibbs, R., Weinstock, G., Brown, S., Denell, R., Beeman, R., Gibbs, R., Bucher, G., Friedrich, M. and Grimmelikhuijzen, C. (2008) The genome of the model beetle and pest Tribolium castaneum. Nature, 452, 949-955.
41. Richards, S., Liu, Y., Bettencourt, B., Hradecky, P., Letovsky, S., Nielsen, R., Thornton, K., Hubisz, M., Chen, R. and Meisel, R. (2005) Comparative genome sequencing of Drosophila pseudoobscura: Chromosomal, gene, and cis-element evolution. Genome Research, 15, 1-18.
42. Sandberg, R., Neilson, J., Sarma, A., Sharp, P. and Burge, C. (2008) Proliferating cells express mRNAs with shortened 3′ untranslated regions and fewer microRNA target sites. Science, 320, 1643-1647.
43. Scaraffia, P. and Wells, M. (2003) Proline can be utilized as an energy substrate during flight of Aedes aegypti females. Journal of Insect Physiology, 49, 591-601.
44. Shayan, A., Brodin, L., Ottersen, O., Birinyi, A., Hill, C., Govind, C., Atwood, H. and Shupliakov, O. (2000) Neurotransmitter levels and synaptic strength at the Drosophila larval neuromuscular junction are not altered by mutation in the sluggish-A gene, which encodes proline oxidase and affects adult locomotion. Journal of Neurogenetics, 14, 165-192.
45. Shi, X.Q., Guo, W.C., Wan, P.J., Zhou, L.T., Ren, X.L., Tursun, A., Fu, K.Y., and Li, G.Q. (2013) Validation of reference genes for expression analysis by quantitative real-time PCR in Leptinotarsa decemlineata (Say). BMC Research Notes, 6, 93.
46. Shi, X.Q., Xiong, M.H., Jiang, W.H., Wang, Z.T., Guo, W.C., Xia, Z.H., Fu, W.J. and Li, G.Q. (2012) Efficacy of endosulfan and fipronil and joint toxic action of endosulfan mixtures against Leptinotarsa decemlineata (Say). Journal of Pest Science, 85, 519-526.
47. Stegwee, D., Kimmel, E., De Boer, J. and Henstra, S. (1963) Hormonal control of reversible degeneration of flight muscle in the Colorado potato beetle, Leptinotarsa decemlineata Say (Coleoptera). Journal of Cell Biology, 19, 519-527.
48. Thompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research, 22, 4673-4680.
49. Tian, B., Hu, J., Zhang, H. and Lutz, C. (2005) A large-scale analysis of mRNA polyadenylation of human and mouse genes. Nucleic Acids Research, 33, 201-212.
50. Weeda, E., De Kort, C. and Beenakkers, A. (1979) Fuels for energy metabolism in the Colorado potato beetle, Leptinotarsa decemlineata Say. Journal of Insect Physiology, 25, 951-955.
51. Weeda, E., De Kort, C. and Beenakkers, A. (1980) Oxidation of proline and pyruvate by flight muscle mitochondria of the Colorado beetle, Leptinotarsa decemlineta Say. Insect Biochemistry, 10, 305-311.
52. Zhang, H., Lee, J. and Tian, B. (2005) Biased alternative polyadenylation in human tissues. Genome Biology, 6, R100.