메뉴 건너뛰기




Volumn 6, Issue 1, 2014, Pages 31-38

Identification of the involvement of LOXL4 in generation of keratocystic odontogenic tumors by RNA-Seq analysis

Author keywords

angiogenesis; keratocystic odontogenic tumor; lysyl oxidase like 4; RNA sequencing; tumor stromal fibroblast

Indexed keywords

LOXL4 PROTEIN, HUMAN; OXIDOREDUCTASE;

EID: 84896984428     PISSN: 16742818     EISSN: 20493169     Source Type: Journal    
DOI: 10.1038/ijos.2013.96     Document Type: Article
Times cited : (23)

References (40)
  • 1
    • 72149085704 scopus 로고    scopus 로고
    • Biological pathways involved in the aggressive behavior of the keratocystic odontogenic tumor and possible implications for molecular oriented treatment-an overview
    • Mendes RA, Carvalho JF, van der Waal I. Biological pathways involved in the aggressive behavior of the keratocystic odontogenic tumor and possible implications for molecular oriented treatment-an overview. Oral Oncol 2010; 46(1): 19-24.
    • (2010) Oral Oncol , vol.46 , Issue.1 , pp. 19-24
    • Mendes, R.A.1    Carvalho, J.F.2    Van Der-Waal, I.3
  • 2
    • 73949121289 scopus 로고    scopus 로고
    • Keratocystic odontogenic tumor associated with nevoid basal cell carcinoma syndrome: Similar behavior to sporadic type?
    • Figueroa A, Correnti M, Avila M et al. Keratocystic odontogenic tumor associated with nevoid basal cell carcinoma syndrome: similar behavior to sporadic type? Otolaryngol Head Neck Surg 2010; 142(2): 179-183.
    • (2010) Otolaryngol Head Neck Surg , vol.142 , Issue.2 , pp. 179-183
    • Figueroa, A.1    Correnti, M.2    Avila, M.3
  • 4
    • 74549200943 scopus 로고    scopus 로고
    • Mechanisms of inactivation of PTCH1 gene in nevoid basal cell carcinoma syndrome: Modification of the two-hit hypothesis
    • Pan S, Dong Q, Li TJ et al. Mechanisms of inactivation of PTCH1 gene in nevoid basal cell carcinoma syndrome: modification of the two-hit hypothesis. Clin Cancer Res 2010; 16(2): 442-450.
    • (2010) Clin Cancer Res , vol.16 , Issue.2 , pp. 442-450
    • Pan, S.1    Dong, Q.2    Li, T.J.3
  • 5
    • 0016772909 scopus 로고
    • The pathogenesis of odontogenic cysts: A review
    • Browne RM. The pathogenesis of odontogenic cysts: a review. J Oral Pathol 1975; 4(1): 31-46.
    • (1975) J Oral Pathol , vol.4 , Issue.1 , pp. 31-46
    • Browne, R.M.1
  • 7
    • 0034254445 scopus 로고    scopus 로고
    • The influence of themicroenvironment on the malignant phenotype
    • Park CC, Bissell MJ, Barcellos-Hoff MH. The influence of themicroenvironment on the malignant phenotype. Mol Med Today 2000; 6(8): 324-329.
    • (2000) Mol Med Today , vol.6 , Issue.8 , pp. 324-329
    • Park, C.C.1    Bissell, M.J.2    Barcellos-Hoff, M.H.3
  • 8
    • 79951890267 scopus 로고    scopus 로고
    • Gondivkar. Tumor angiogenesis in keratocystic odontogenic tumor assessed by using CD-105 antigen
    • Gadbail AR, Hande A, Chaudhary M et al. Gondivkar. Tumor angiogenesis in keratocystic odontogenic tumor assessed by using CD-105 antigen. J Oral Pathol Med 2011; 40(3): 263-269.
    • (2011) J Oral Pathol Med , vol.40 , Issue.3 , pp. 263-269
    • Gadbail, A.R.1    Hande, A.2    Chaudhary, M.3
  • 9
    • 82955212830 scopus 로고    scopus 로고
    • Differences in collagen fibres in the capsule walls of parakeratinized and orthokeratinized odontogenic cysts
    • Zhang JY, Dong Q, Li TJ. Differences in collagen fibres in the capsule walls of parakeratinized and orthokeratinized odontogenic cysts. Int J Oral Maxillofac Surg 2011; 40(11): 1296-1300.
    • (2011) Int J Oral Maxillofac Surg , vol.40 , Issue.11 , pp. 1296-1300
    • Zhang, J.Y.1    Dong, Q.2    Li, T.J.3
  • 10
    • 79951860064 scopus 로고    scopus 로고
    • Evaluation of collagen in connective tissue walls of odontogenic cysts-A histochemical study
    • Vij R, Vij H, Rao NN. Evaluation of collagen in connective tissue walls of odontogenic cysts-a histochemical study. J Oral Pathol Med 2011; 40(3): 257-262.
    • (2011) J Oral Pathol Med , vol.40 , Issue.3 , pp. 257-262
    • Vij, R.1    Vij, H.2    Rao, N.N.3
  • 11
    • 84878139061 scopus 로고    scopus 로고
    • The growth and osteoclastogenic effects of fibroblasts isolated from keratocystic odontogenic tumor
    • Wang HC, Li TJ. The growth and osteoclastogenic effects of fibroblasts isolated from keratocystic odontogenic tumor. Oral Dis 2013; 19(2): 162-168.
    • (2013) Oral Dis , vol.19 , Issue.2 , pp. 162-168
    • Wang, H.C.1    Li, T.J.2
  • 12
    • 77949536719 scopus 로고    scopus 로고
    • Tumor transcriptome sequencing reveals allelic expression imbalances associated with copy number alterations
    • Tuch BB, Laborde RR, Xu X et al. Tumor transcriptome sequencing reveals allelic expression imbalances associated with copy number alterations. PLoS ONE 2010; 5(2): 9317.
    • (2010) PLoS ONE , vol.5 , Issue.2 , pp. 9317
    • Tuch, B.B.1    Laborde, R.R.2    Xu, X.3
  • 13
    • 46249106990 scopus 로고    scopus 로고
    • Mapping and quantifying mammalian transcriptomes by RNA-Seq
    • Mortazavi A, Williams BA, McCue K et al. Mapping and quantifying mammalian transcriptomes by RNA-Seq. Nat Methods 2008; 5(7): 621-628.
    • (2008) Nat Methods , vol.5 , Issue.7 , pp. 621-628
    • Mortazavi, A.1    Williams, B.A.2    McCue, K.3
  • 14
    • 56549101959 scopus 로고    scopus 로고
    • Alternative isoform regulation in human tissue transcriptomes
    • Wang ET, Sandberg R, Luo S et al. Alternative isoform regulation in human tissue transcriptomes. Nature 2008; 456(7221): 470-476.
    • (2008) Nature , vol.456 , Issue.7221 , pp. 470-476
    • Wang, E.T.1    Sandberg, R.2    Luo, S.3
  • 15
    • 68549104404 scopus 로고    scopus 로고
    • The sequence alignment/map format and SAMtools
    • Li H, Handsaker B, Wysoker A et al. The sequence alignment/map format and SAMtools. Bioinformatics 2009; 25(16): 2078-2079.
    • (2009) Bioinformatics , vol.25 , Issue.16 , pp. 2078-2079
    • Li, H.1    Handsaker, B.2    Wysoker, A.3
  • 16
    • 75349100601 scopus 로고    scopus 로고
    • Targeted next-generation sequencing of a cancer transcriptome enhances detection of sequence variants and novel fusion transcripts
    • Levin JZ, Berger MF, Adiconis X et al. Targeted next-generation sequencing of a cancer transcriptome enhances detection of sequence variants and novel fusion transcripts. Genome Biol 2009; 10(10): R115.1-R115.8.
    • (2009) Genome Biol , vol.10 , Issue.10 , pp. 1-8
    • Levin, J.Z.1    Berger, M.F.2    Adiconis, X.3
  • 17
    • 57749195712 scopus 로고    scopus 로고
    • RNA-seq: A revolutionary tool for transcriptomics
    • Wang Z, Gerstein M, Snyder M. RNA-Seq: a revolutionary tool for transcriptomics. Nat Rev Genet 2009; 10(1): 57-63.
    • (2009) Nat Rev Genet , vol.10 , Issue.1 , pp. 57-63
    • Wang, Z.1    Gerstein, M.2    Snyder, M.3
  • 18
    • 38849172507 scopus 로고    scopus 로고
    • Vaccination strategy to target lysyl oxidaselike in dendritic cell based immunotherapy for head and neck cancer
    • Weise JB, Csiszar K, Gottschlich S et al. Vaccination strategy to target lysyl oxidaselike in dendritic cell based immunotherapy for head and neck cancer. Int J Oncol 2008; 32(2): 317-322.
    • (2008) Int J Oncol , vol.32 , Issue.2 , pp. 317-322
    • Weise, J.B.1    Csiszar, K.2    Gottschlich, S.3
  • 19
    • 45449120962 scopus 로고    scopus 로고
    • LOXL4 is a selectively expressed candidate diagnostic antigen in head and neck cancer
    • Weise JB, Csiszar K, Gottschlich S et al. LOXL4 is a selectively expressed candidate diagnostic antigen in head and neck cancer. Int J Oncol 2008; 44(9): 1323-1331.
    • (2008) Int J Oncol , vol.44 , Issue.9 , pp. 1323-1331
    • Weise, J.B.1    Csiszar, K.2    Gottschlich, S.3
  • 20
    • 0029024310 scopus 로고
    • Tumor angiogenesis correlates with lymph node metastases in invasive bladder cancer
    • Jaeger TM, Weidner N, Chew K et al. Tumor angiogenesis correlates with lymph node metastases in invasive bladder cancer. J Urol 1995; 154(1): 69-71.
    • (1995) J Urol , vol.154 , Issue.1 , pp. 69-71
    • Jaeger, T.M.1    Weidner, N.2    Chew, K.3
  • 21
    • 75649116449 scopus 로고    scopus 로고
    • Molecular interactions between HNF4a, FOXA2 and GABP identified at regulatory DNA elements through ChIPsequencing
    • Wallerman O, Motallebipour M, Enroth S et al. Molecular interactions between HNF4a, FOXA2 and GABP identified at regulatory DNA elements through ChIPsequencing. Nucleic Acids Res 2009; 37(22): 7498-7508.
    • (2009) Nucleic Acids Res , vol.37 , Issue.22 , pp. 7498-7508
    • Wallerman, O.1    Motallebipour, M.2    Enroth, S.3
  • 22
    • 84872792202 scopus 로고    scopus 로고
    • Lysyl oxidase and enhancement of cell proliferation and angiogenesis in oral squamous cell carcinoma
    • Shih YH, Chang KW, Chen MY et al. Lysyl oxidase and enhancement of cell proliferation and angiogenesis in oral squamous cell carcinoma. Head Neck 2012; 35(2): 250-256.
    • (2012) Head Neck , vol.35 , Issue.2 , pp. 250-256
    • Shih, Y.H.1    Chang, K.W.2    Chen, M.Y.3
  • 23
    • 80053648630 scopus 로고    scopus 로고
    • Lysyl oxidase-like protein-2 regulates sprouting angiogenesis and type IV collagen assembly in the endothelial basement membrane
    • Bignon M, Pichol-Thievend C, Hardouin J et al. Lysyl oxidase-like protein-2 regulates sprouting angiogenesis and type IV collagen assembly in the endothelial basement membrane. Blood 2011; 118(14): 3979-3989.
    • (2011) Blood , vol.118 , Issue.14 , pp. 3979-3989
    • Bignon, M.1    Pichol-Thievend, C.2    Hardouin, J.3
  • 24
    • 0001513037 scopus 로고
    • Om keratocystedr (kolesteratomer) i and kaeberne
    • Philipsen HP. Om keratocystedr (kolesteratomer) i and kaeberne. Tandlaegebladet 1956; 60: 963-971.
    • (1956) Tandlaegebladet , vol.60 , pp. 963-971
    • Philipsen, H.P.1
  • 25
    • 84863610496 scopus 로고    scopus 로고
    • Clinical, diagnostic and therapeutic features of keratocystic odontogenic tumors: A review
    • Jurisic M, Andric M, dos Santos JN et al. Clinical, diagnostic and therapeutic features of keratocystic odontogenic tumors: a review. J BUON 2012; 17(2): 237-244.
    • (2012) J BUON , vol.17 , Issue.2 , pp. 237-244
    • Jurisic, M.1    Andric, M.2    Dos Santos, J.N.3
  • 26
    • 34250614227 scopus 로고    scopus 로고
    • World health organization classification of tumours: Pathology and genetics of head and neck tumours
    • Barnes L, Eveson J, Reichart P et al. World Health Organization classification of tumours: pathology and genetics of head and neck tumours. Ear Nose Throat J 2006; 85(2): 74.
    • (2006) Ear Nose Throat J , vol.85 , Issue.2 , pp. 74
    • Barnes, L.1    Eveson, J.2    Reichart, P.3
  • 27
    • 42149168084 scopus 로고    scopus 로고
    • Perlecan-rich epithelial linings as a background of proliferative potentials of keratocystic odontogenic tumor
    • Tsuneki M, Cheng J, Maruyama S et al. Perlecan-rich epithelial linings as a background of proliferative potentials of keratocystic odontogenic tumor. J Oral Pathol Med 2008; 37(5): 287-293.
    • (2008) J Oral Pathol Med , vol.37 , Issue.5 , pp. 287-293
    • Tsuneki, M.1    Cheng, J.2    Maruyama, S.3
  • 28
    • 70349206162 scopus 로고    scopus 로고
    • PTCH1 mutations in odontogenic keratocysts: Are they related to epithelial cell proliferation?
    • Pan S, Li TJ. PTCH1 mutations in odontogenic keratocysts: are they related to epithelial cell proliferation? Oral Oncol 2009; 45(10): 861-865.
    • (2009) Oral Oncol , vol.45 , Issue.10 , pp. 861-865
    • Pan, S.1    Li, T.J.2
  • 29
    • 79951516752 scopus 로고    scopus 로고
    • A comparative immunohistochemical analysis of COX-2, p53, and Ki-67 expression in keratocystic odontogenic tumors
    • Mendes RA, Carvalho JF, van der Waal I. A comparative immunohistochemical analysis of COX-2, p53, and Ki-67 expression in keratocystic odontogenic tumors. Oral Surg Oral Med Oral Pathol Oral Radiol Endod 2011; 111(3): 333-339.
    • (2011) Oral Surg Oral Med Oral Pathol Oral Radiol Endod , vol.111 , Issue.3 , pp. 333-339
    • Mendes, R.A.1    Carvalho, J.F.2    Van Der-Waal, I.3
  • 30
    • 0033213132 scopus 로고    scopus 로고
    • Collagen fibres in the wall of odontogenic keratocysts: A study with picrosirius red polarization microscopy
    • Hirshberg A, Sherman S, Buchner A et al. Collagen fibres in the wall of odontogenic keratocysts: a study with picrosirius red polarization microscopy. J Oral Pathol Med 1999; 28(9): 410-412.
    • (1999) J Oral Pathol Med , vol.28 , Issue.9 , pp. 410-412
    • Hirshberg, A.1    Sherman, S.2    Buchner, A.3
  • 31
    • 0036310455 scopus 로고    scopus 로고
    • The aggressive nature of the odontogenic keratocyst: Is it a benign cystic neoplasm? Part 3. Immunocytochemistry of cytokeratin and other epithelial cell markers
    • Shear M. The aggressive nature of the odontogenic keratocyst: is it a benign cystic neoplasm? Part 3. Immunocytochemistry of cytokeratin and other epithelial cell markers. Oral Oncol 2002; 38(5): 407-415.
    • (2002) Oral Oncol , vol.38 , Issue.5 , pp. 407-415
    • Shear, M.1
  • 32
    • 78650239327 scopus 로고    scopus 로고
    • LOXL4 as a selective molecular marker in primary and metastatic head/neck carcinoma
    • Scola N, Gorogh T. LOXL4 as a selective molecular marker in primary and metastatic head/neck carcinoma. Anticancer Res 2010; 30(11): 4567-4571.
    • (2010) Anticancer Res , vol.30 , Issue.11 , pp. 4567-4571
    • Scola, N.1    Gorogh, T.2
  • 33
    • 0025695233 scopus 로고
    • A comparative stereologic and ultrastructural study of blood vessels in odontogenic keratocysts and dentigerous cysts
    • el-Labban NG, Aghabeigi B. A comparative stereologic and ultrastructural study of blood vessels in odontogenic keratocysts and dentigerous cysts. J Oral Pathol Med 1990; 19(10): 442-446.
    • (1990) J Oral Pathol Med , vol.19 , Issue.10 , pp. 442-446
    • El-Labban, N.G.1    Aghabeigi, B.2
  • 34
    • 68949201140 scopus 로고    scopus 로고
    • Comparison of angiogenesis in keratocystic odontogenic tumours, dentigerous cysts and ameloblastomas
    • Alaeddini M, Salah S, Dehghan F et al. Comparison of angiogenesis in keratocystic odontogenic tumours, dentigerous cysts and ameloblastomas. Oral Dis 2009; 15(6): 422-427.
    • (2009) Oral Dis , vol.15 , Issue.6 , pp. 422-427
    • Alaeddini, M.1    Salah, S.2    Dehghan, F.3
  • 35
    • 68849090256 scopus 로고    scopus 로고
    • T-cell leukemia translocation-associated gene (TCTA) protein is required for human osteoclastogenesis
    • Kotake S, Nanke Y, Kawamoto M et al. T-cell leukemia translocation- associated gene (TCTA) protein is required for human osteoclastogenesis. Bone 2009; 45(4): 627-639.
    • (2009) Bone , vol.45 , Issue.4 , pp. 627-639
    • Kotake, S.1    Nanke, Y.2    Kawamoto, M.3
  • 36
    • 84855985830 scopus 로고    scopus 로고
    • A novel role of RNA helicase A in regulation of translation of type i collagen mRNAs
    • Manojlovic Z, Stefanovic. A novel role of RNA helicase A in regulation of translation of type I collagen mRNAs. RNA 2012; 18(2): 321-324.
    • (2012) RNA , vol.18 , Issue.2 , pp. 321-324
    • Manojlovic, Z.1    Stefanovic2
  • 37
    • 80052601574 scopus 로고    scopus 로고
    • A novel role of vimentin filaments: Binding and stabilization of collagen mRNAs
    • Challa AA, Stefanovic B. A novel role of vimentin filaments: binding and stabilization of collagen mRNAs. Mol Cell Biol 2011; 31(18): 3773-3789.
    • (2011) Mol Cell Biol , vol.31 , Issue.18 , pp. 3773-3789
    • Challa, A.A.1    Stefanovic, B.2
  • 38
    • 77957779890 scopus 로고    scopus 로고
    • Genetic variations in regulator of G-protein signaling genes as susceptibility loci for second primary tumor/recurrence in head and neck squamous cell carcinom
    • Wang J, Lippman SM, Lee JJ et al. Genetic variations in regulator of G-protein signaling genes as susceptibility loci for second primary tumor/recurrence in head and neck squamous cell carcinom. Carcinogenesis 2010; 31(10): 1755-1761.
    • (2010) Carcinogenesis , vol.31 , Issue.10 , pp. 1755-1761
    • Wang, J.1    Lippman, S.M.2    Lee, J.J.3
  • 39
    • 58349108702 scopus 로고    scopus 로고
    • Modulation of G protein signaling normalizes tumor vessels
    • Manzur M, Hamzah J, Ganss R. Modulation of G protein signaling normalizes tumor vessels. Cancer Res 2009; 69(2): 396-399.
    • (2009) Cancer Res , vol.69 , Issue.2 , pp. 396-399
    • Manzur, M.1    Hamzah, J.2    Ganss, R.3
  • 40
    • 33845921194 scopus 로고    scopus 로고
    • RGS12 is essential for RANKL-evoked signaling for terminal differentiation of osteoclasts in vitro
    • Yang S, Li YP. RGS12 is essential for RANKL-evoked signaling for terminal differentiation of osteoclasts in vitro. J Bone Miner Res 2007; 22(1): 45-54.
    • (2007) J Bone Miner Res , vol.22 , Issue.1 , pp. 45-54
    • Yang, S.1    Li, Y.P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.