메뉴 건너뛰기




Volumn 18, Issue 2, 2014, Pages 500-507

Local and global preserving semisupervised dimensionality reduction based on random subspace for cancer classification

Author keywords

Cancer classification; dimensionality reduction; graph construction; random subspace; semisupervised learning

Indexed keywords

CLUSTERING ALGORITHMS; COMPUTER AIDED DIAGNOSIS; DATA REDUCTION; DISEASES; GENE EXPRESSION; GRAPH ALGORITHMS; MIXTURES; PROBABILITY DISTRIBUTIONS; SEMI-SUPERVISED LEARNING;

EID: 84896445930     PISSN: 21682194     EISSN: None     Source Type: Journal    
DOI: 10.1109/JBHI.2013.2281985     Document Type: Article
Times cited : (19)

References (33)
  • 1
    • 67749108622 scopus 로고    scopus 로고
    • Tumor clustering using non-negative matrix factorization with gene selection
    • Jul.
    • C. H. Zheng, D. S. Huang, L. Zhang, and X. Z. Kong, "Tumor clustering using non-negative matrix factorization with gene selection," IEEE Trans. Inf. Technol. Biomed., vol. 13, no. 4, pp. 599-607, Jul. 2009.
    • (2009) IEEE Trans. Inf. Technol. Biomed. , vol.13 , Issue.4 , pp. 599-607
    • Zheng, C.H.1    Huang, D.S.2    Zhang, L.3    Kong, X.Z.4
  • 5
    • 0036161259 scopus 로고    scopus 로고
    • Gene selection for cancer classification using support vector machines
    • G. Isabelle, W. Jason, B. Stephen, and V. Vladimir, "Gene selection for cancer classification using support vector machines," Mach. Learning, vol. 46, no. 1, pp. 389-422, 2002.
    • (2002) Mach. Learning , vol.46 , Issue.1 , pp. 389-422
    • Isabelle, G.1    Jason, W.2    Stephen, B.3    Vladimir, V.4
  • 6
    • 19344363436 scopus 로고    scopus 로고
    • Predictive neural networks for gene expression data analysis
    • T. Ah Hwee and P. Hong, "Predictive neural networks for gene expression data analysis," Neural Netw., vol. 18, no. 3, pp. 297-306, 2005.
    • (2005) Neural Netw. , vol.18 , Issue.3 , pp. 297-306
    • Hwee, T.A.H.1    Hong, P.2
  • 7
    • 0036139278 scopus 로고    scopus 로고
    • Gene selection for sample classification based on gene expression data: Study of sensitivity to choice of parameters of the GA/KNN method
    • L. Li, C. R.Weinberg, T. A. Darden, and L. G. Pedersen, "Gene selection for sample classification based on gene expression data: Study of sensitivity to choice of parameters of the GA/KNN method," Bioinformatics, vol. 17, no. 12, pp. 1131-1142, 2001. (Pubitemid 33735339)
    • (2001) Bioinformatics , vol.17 , Issue.12 , pp. 1131-1142
    • Li, L.1    Weinberg, C.R.2    Darden, T.A.3    Pedersen, L.G.4
  • 8
    • 0036166439 scopus 로고    scopus 로고
    • Tumor classification by partial least squares using microarray gene expression data
    • D. V. Nguyen and D. M. Rocke, "Tumor classification by partial least squares using microarray gene expression data," Bioinformatics, vol. 18, no. 1, pp. 39-50, 2002. (Pubitemid 34145030)
    • (2002) Bioinformatics , vol.18 , Issue.1 , pp. 39-50
    • Nguyen, D.V.1    Rocke, D.M.2
  • 9
    • 33747865502 scopus 로고    scopus 로고
    • Independent component analysis based penalized discriminant method for tumor classification using gene expression data
    • D. S. Huang and C. H. Zheng, "Independent component analysis based penalized discriminant method for tumor classification using gene expression data," Bioinformatics, vol. 22, no. 15, pp. 1855-1862, 2006.
    • (2006) Bioinformatics , vol.22 , Issue.15 , pp. 1855-1862
    • Huang, D.S.1    Zheng, C.H.2
  • 10
    • 10244252786 scopus 로고    scopus 로고
    • Systematic benchmarking of microarray data classification: Assessing the role of non-linearity and dimensionality reduction
    • DOI 10.1093/bioinformatics/bth383
    • N. Pochet, F. De Smet, J. A. K. Suykens, and B. L. R. DeMoor, "Systematic benchmarking of microarray data classification: Assessing the role of non-linearity and dimensionality reduction," Bioinformatics, vol. 20, pp. 3185-3195, 2004. (Pubitemid 39619208)
    • (2004) Bioinformatics , vol.20 , Issue.17 , pp. 3185-3195
    • Pochet, N.1    De Smet, F.2    Suykens, J.A.K.3    De Moor, B.L.R.4
  • 11
    • 77957255786 scopus 로고    scopus 로고
    • Gene expression data classification using locally linear discriminant embedding[J]
    • B. Li, C. H. Zheng, D. S. Huang et al., "Gene expression data classification using locally linear discriminant embedding[J]," Comput. Biol. Med., vol. 40, pp. 802-810, 2010.
    • (2010) Comput. Biol. Med. , vol.40 , pp. 802-810
    • Li, B.1    Zheng, C.H.2    Huang, D.S.3
  • 12
    • 35248860116 scopus 로고    scopus 로고
    • Supervised locally linear embedding[C]
    • D. D. Ridder, O. Kouropteva, O. Okun et al., "Supervised locally linear embedding[C]," Lecture Notes Comput. Sci., vol. 34, no. 10, pp. 333-341, 2003.
    • (2003) Lecture Notes Comput. Sci. , vol.34 , Issue.10 , pp. 333-341
    • Ridder, D.D.1    Kouropteva, O.2    Okun, O.3
  • 13
    • 0042378381 scopus 로고    scopus 로고
    • Laplacian eigenmaps for dimensionality reduction and data representation
    • DOI 10.1162/089976603321780317
    • M. Belkin and P. Niyogi, "Laplacian eigenmaps for dimensionality reduction and data representation," Neural Comput., vol. 15, no. 6, pp. 1373-1396, 2003. (Pubitemid 37049796)
    • (2003) Neural Computation , vol.15 , Issue.6 , pp. 1373-1396
    • Belkin, M.1    Niyogi, P.2
  • 14
    • 13444286179 scopus 로고    scopus 로고
    • Locality preserving projections
    • S. Thrun, K. Saul, and B. Scḧolkopf, Eds. Cambridge, MA, USA MIT Press
    • X. F. He and P. Niyogi, "Locality preserving projections," in Advances in Neural Information Processing Systems, S. Thrun, K. Saul, and B. Scḧolkopf, Eds. vol. 16, Cambridge, MA, USA, MIT Press, 2004, pp. 153-160.
    • (2004) Advances in Neural Information Processing Systems , vol.16 , pp. 153-160
    • He, X.F.1    Niyogi, P.2
  • 15
    • 0034704229 scopus 로고    scopus 로고
    • A global geometric framework for nonlinear dimensionality reduction
    • DOI 10.1126/science.290.5500.2319
    • J. B. Tenenbaum, V. de Silva, and J. C. Langford, "A global geometric framework for nonlinear dimensionality reduction," Science, vol. 290, no. 5500, pp. 2319-2323, 2000. (Pubitemid 32041577)
    • (2000) Science , vol.290 , Issue.5500 , pp. 2319-2323
    • Tenenbaum, J.B.1    De Silva, V.2    Langford, J.C.3
  • 16
    • 14544307975 scopus 로고    scopus 로고
    • Principal manifolds and nonlinear dimensionality reduction via tangent space alignment
    • Z. Zhang and H. Zha, "Principal manifolds and nonlinear dimensionality reduction via tangent space alignment," SIAM J. Sci. Comput., vol. 26, no. 1, pp. 313-338, 2004.
    • (2004) SIAM J. Sci. Comput. , vol.26 , Issue.1 , pp. 313-338
    • Zhang, Z.1    Zha, H.2
  • 17
    • 33745456231 scopus 로고    scopus 로고
    • Univ. Wisconsin-Madison, Tech. Rep. [Online]. Available
    • X. Zhu, (2008). Semi-supervised learning literature. Dept. Computer Sci., Univ. Wisconsin-Madison, Tech. Rep. 1530 [Online]. Available: http://www.cs.wisc.edu/?jerryzhu/pub/ssl-survey.pdf
    • (2008) Semi-supervised Learning Literature. Dept. Computer Sci. , pp. 1530
    • Zhu, X.1
  • 18
    • 9444294778 scopus 로고    scopus 로고
    • From instance-level constraints to space-level constraints: Making the most of prior knowledge in data clustering
    • C. Sammut and A. G. Hoffmann, Eds. San Francisco, CA, USA: Morgan Kaufmann
    • D. Klein, S. D. Kamvar, and C. D. Manning, "From instance-level constraints to space-level constraints: Making the most of prior knowledge in data clustering," in Proc. 19th Int'l Conf. Mach. Learning, C. Sammut and A. G. Hoffmann, Eds. San Francisco, CA, USA: Morgan Kaufmann, 2002, pp. 307-314.
    • (2002) Proc. 19th Int'l Conf. Mach. Learning , pp. 307-314
    • Klein, D.1    Kamvar, S.D.2    Manning, C.D.3
  • 21
    • 52349092368 scopus 로고    scopus 로고
    • Neighbourhood preserving based semi-supervised dimensionality reduction [J]
    • J. Wei and H. Peng, "Neighbourhood preserving based semi-supervised dimensionality reduction [J]," Electron. Lett., vol. 44, no. 20, pp. 1190-1192, 2008.
    • (2008) Electron. Lett. , vol.44 , Issue.20 , pp. 1190-1192
    • Wei, J.1    Peng, H.2
  • 24
    • 3142725535 scopus 로고    scopus 로고
    • Semi-supervised learning on Riemannian manifolds
    • M. Belkin and P. Niyogi, "Semi-supervised learning on Riemannian manifolds," Mach. Learning, vol. 56, no. 1, pp. 209-239, 2004.
    • (2004) Mach. Learning , vol.56 , Issue.1 , pp. 209-239
    • Belkin, M.1    Niyogi, P.2
  • 26
    • 17044376078 scopus 로고    scopus 로고
    • Subspace clustering for high dimensional data: A review
    • L. Parsons, E. Haque, and H. Liu, "Subspace clustering for high dimensional data: A review," ACM SIGKDD Explorations Newsletter, vol. 6, no. 1, pp. 90-105, 2004.
    • (2004) ACM SIGKDD Explorations Newsletter , vol.6 , Issue.1 , pp. 90-105
    • Parsons, L.1    Haque, E.2    Liu, H.3
  • 27
  • 28
    • 84862783743 scopus 로고    scopus 로고
    • Semi-supervised ensemble classification in subspaces
    • G. Yu, G. Zhang, and Z. Yu, "Semi-supervised ensemble classification in subspaces," Appl. Soft Comput., vol. 12, pp. 1511-1522, 2012.
    • (2012) Appl. Soft Comput. , vol.12 , pp. 1511-1522
    • Yu, G.1    Zhang, G.2    Yu, Z.3
  • 30
    • 84876113039 scopus 로고    scopus 로고
    • Random subspace evidence classifier
    • H. Li and G. Wen, "Random subspace evidence classifier," Nurocomputing, vol. 110, pp. 62-69, 2013.
    • (2013) Nurocomputing , vol.110 , pp. 62-69
    • Li, H.1    Wen, G.2
  • 31
    • 42249099301 scopus 로고    scopus 로고
    • Subspace metric ensembles for semisupervised clustering of high dimensional data
    • B. J. Yan and C. Domeniconi, "Subspace metric ensembles for semisupervised clustering of high dimensional data," in Proc. 17th Eur. Conf. Mach. Learning (ECML), 2006.
    • (2006) Proc. 17th Eur. Conf. Mach. Learning (ECML)
    • Yan, B.J.1    Domeniconi, C.2
  • 33
    • 78049341530 scopus 로고    scopus 로고
    • Learn++: A random subspace approach for the missing feature problem
    • R. Polikar, J. Depasquale, H. S. Mohammed, G. Brown, and L. I. Kuncheva, "Learn++: A random subspace approach for the missing feature problem," Pattern Recog., vol. 43, no. 11, pp. 3817-3832, 2010.
    • (2010) Pattern Recog. , vol.43 , Issue.11 , pp. 3817-3832
    • Polikar, R.1    Depasquale, J.2    Mohammed, H.S.3    Brown, G.4    Kuncheva, L.I.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.