메뉴 건너뛰기




Volumn , Issue , 2012, Pages 145-154

Plastid genome diversity

Author keywords

[No Author keywords available]

Indexed keywords


EID: 84896390420     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-3-7091-1130-7_10     Document Type: Chapter
Times cited : (3)

References (103)
  • 1
    • 0026556851 scopus 로고
    • Protein-phosphorylation in regulation of photosynthesis
    • Allen JF (1992) Protein-phosphorylation in regulation of photosynthesis. Biochim Biophys Acta 1098:275-335
    • (1992) Biochim Biophys Acta , vol.1098 , pp. 275-335
    • Allen, J.F.1
  • 2
    • 0037295044 scopus 로고    scopus 로고
    • Why chloroplasts and mitochondria contain genomes
    • Allen JF (2003) Why chloroplasts and mitochondria contain genomes. Comp Funct Genomics 4:31-36
    • (2003) Comp Funct Genomics , vol.4 , pp. 31-36
    • Allen, J.F.1
  • 3
    • 0001112913 scopus 로고
    • Das Wesen und die Erblichkeitsverhältnisse der “Varietates albomarginatae hort.” von Pelargonium zonale
    • Baur E (1909) Das Wesen und die Erblichkeitsverhältnisse der “Varietates albomarginatae hort.” von Pelargonium zonale. Ztschr Indukt Abstammungs Vererbungsl 1:330-351
    • (1909) Ztschr Indukt Abstammungs Vererbungsl , vol.1 , pp. 330-351
    • Baur, E.1
  • 5
    • 3142719794 scopus 로고    scopus 로고
    • Circular chloroplast chromosomes: The grand illusion
    • Bendich AJ (2004) Circular chloroplast chromosomes: the grand illusion. Plant Cell 16:1661-1666
    • (2004) Plant Cell , vol.16 , pp. 1661-1666
    • Bendich, A.J.1
  • 6
    • 34548829676 scopus 로고    scopus 로고
    • Structure, function, and inheritance of plastid genomes
    • Bock R (2007) Structure, function, and inheritance of plastid genomes. Cell Mol Biol Plast 19:29-63
    • (2007) Cell Mol Biol Plast , vol.19 , pp. 29-63
    • Bock, R.1
  • 7
    • 0001433918 scopus 로고
    • Chloroplast DNA levels and the control of chloroplast division in light-grown wheat leaves
    • Boffey SA, Leech RM (1982) Chloroplast DNA levels and the control of chloroplast division in light-grown wheat leaves. Plant Physiol 69:1387-1391
    • (1982) Plant Physiol , vol.69 , pp. 1387-1391
    • Boffey, S.A.1    Leech, R.M.2
  • 8
    • 70349335267 scopus 로고    scopus 로고
    • The current structural and functional understanding of APOBEC deaminases
    • Bransteitter R, Prochnow C, Chen XJS (2009) The current structural and functional understanding of APOBEC deaminases. Cell Mol Life Sci 66:3137-3147
    • (2009) Cell Mol Life Sci , vol.66 , pp. 3137-3147
    • Bransteitter, R.1    Prochnow, C.2    Chen, X.J.S.3
  • 9
    • 77958495156 scopus 로고    scopus 로고
    • The exceptionally large chloroplast genome of the green alga Floydiella terrestris illuminates the evolutionary history of the Chlorophyceae
    • Brouard JS, Otis C, Lemieux C, Turmel M (2010) The exceptionally large chloroplast genome of the green alga Floydiella terrestris illuminates the evolutionary history of the Chlorophyceae. Genome Biol Evol 2:240-256
    • (2010) Genome Biol Evol , vol.2 , pp. 240-256
    • Brouard, J.S.1    Otis, C.2    Lemieux, C.3    Turmel, M.4
  • 10
    • 0029817685 scopus 로고    scopus 로고
    • A common evolutionary origin for mitochondria and hydrogenosomes
    • Bui ETN, Bradley PJ, Johnson PJ (1996) A common evolutionary origin for mitochondria and hydrogenosomes. Proc Natl Acad Sci U S A 93:9651-9656
    • (1996) Proc Natl Acad Sci U S A , vol.93 , pp. 9651-9656
    • Bui, E.T.N.1    Bradley, P.J.2    Johnson, P.J.3
  • 11
    • 65349104518 scopus 로고    scopus 로고
    • Extensive reorganization of the plastid genome of Trifolium subterraneum (Fabaceae) is associated with numerous repeated sequences and novel DNA insertions
    • Cai ZQ, Guisinger M, Kim HG, Ruck E, Blazier JC, McMurtry V, Kuehl JV, Boore J, Jansen RK (2008) Extensive reorganization of the plastid genome of Trifolium subterraneum (Fabaceae) is associated with numerous repeated sequences and novel DNA insertions. J Mol Evol 67:696-704
    • (2008) J Mol Evol , vol.67 , pp. 696-704
    • Cai, Z.Q.1    Guisinger, M.2    Kim, H.G.3    Ruck, E.4    Blazier, J.C.5    McMurtry, V.6    Kuehl, J.V.7    Boore, J.8    Jansen, R.K.9
  • 12
    • 58549083352 scopus 로고    scopus 로고
    • Evolution of small inversions in chloroplast genome: A case study from a recurrent inversion in angiosperms
    • Catalano SA, Saidman BO, Vilardi JC (2009) Evolution of small inversions in chloroplast genome: a case study from a recurrent inversion in angiosperms. Cladistics 25:93-104
    • (2009) Cladistics , vol.25 , pp. 93-104
    • Catalano, S.A.1    Saidman, B.O.2    Vilardi, J.C.3
  • 13
    • 0037154314 scopus 로고    scopus 로고
    • Chloroplast evolution: Secondary symbiogenesis and multiple losses
    • Cavalier-Smith T (2002) Chloroplast evolution: secondary symbiogenesis and multiple losses. Curr Biol 12:R62-R64
    • (2002) Curr Biol , vol.12 , pp. R62-R64
    • Cavalier-Smith, T.1
  • 14
    • 45849093619 scopus 로고    scopus 로고
    • Gene flow, risk assessment and the environmental release of transgenic plants
    • Chandler S, Dunwell JM (2008) Gene flow, risk assessment and the environmental release of transgenic plants. Crit Rev Plant Sci 27:25-49
    • (2008) Crit Rev Plant Sci , vol.27 , pp. 25-49
    • Chandler, S.1    Dunwell, J.M.2
  • 15
    • 85008270713 scopus 로고
    • Cytochemical studies on chloroplasts. I. Cytologic demonstration of nucleic acids in chloroplasts
    • Chiba Y (1951) Cytochemical studies on chloroplasts. I. Cytologic demonstration of nucleic acids in chloroplasts. Cytologia 16:259-264
    • (1951) Cytologia , vol.16 , pp. 259-264
    • Chiba, Y.1
  • 16
    • 33749336062 scopus 로고    scopus 로고
    • The complete chloroplast genome sequence of Pelargonium × hortorum: Organization and evolution of the largest and most highly rearranged chloroplast genome of land plants
    • Chumley TW, Palmer JD, Mower JP, Fourcade HM, Calie PJ, Boore JL, Jansen RK (2006) The complete chloroplast genome sequence of Pelargonium × hortorum: organization and evolution of the largest and most highly rearranged chloroplast genome of land plants. Mol Biol Evol 23:2175-2190
    • (2006) Mol Biol Evol , vol.23 , pp. 2175-2190
    • Chumley, T.W.1    Palmer, J.D.2    Mower, J.P.3    Fourcade, H.M.4    Calie, P.J.5    Boore, J.L.6    Jansen, R.K.7
  • 17
    • 56549086194 scopus 로고    scopus 로고
    • Relative rates of synonymous substitutions in the mitochondrial, chloroplast and nuclear genomes of seed plants
    • Drouin G, Daoud H, Xia J (2008) Relative rates of synonymous substitutions in the mitochondrial, chloroplast and nuclear genomes of seed plants. Mol Phylogenet Evol 49:827-831
    • (2008) Mol Phylogenet Evol , vol.49 , pp. 827-831
    • Drouin, G.1    Daoud, H.2    Xia, J.3
  • 18
    • 27744504009 scopus 로고    scopus 로고
    • Pervasive RNA editing among hornwort rbcL transcripts except Leiosporceros
    • Duff RJ, Moore FBG (2005) Pervasive RNA editing among hornwort rbcL transcripts except Leiosporceros. J Mol Evol 61:571-578
    • (2005) J Mol Evol , vol.61 , pp. 571-578
    • Duff, R.J.1    Moore, F.B.G.2
  • 19
    • 64749112097 scopus 로고    scopus 로고
    • Conservation of selection on matK following an ancient loss of its flanking intron
    • Duffy AM, Kelchner SA, Wolf PG (2009) Conservation of selection on matK following an ancient loss of its flanking intron. Gene 438:17-25
    • (2009) Gene , vol.438 , pp. 17-25
    • Duffy, A.M.1    Kelchner, S.A.2    Wolf, P.G.3
  • 20
    • 0029411215 scopus 로고
    • Transcription, splicing and editing of plastid RNAs in the nonphotosynthetic plant Epifagus virginiana
    • Ems SC, MordenCW, Dixon CK, Wolfe KH, dePamphilisCW, Palmer JD (1995) Transcription, splicing and editing of plastid RNAs in the nonphotosynthetic plant Epifagus virginiana. Plant Mol Biol 29:721-733
    • (1995) Plant Mol Biol , vol.29 , pp. 721-733
    • Ems, S.C.1    Morden, C.W.2    Dixon, C.K.3    Wolfe, K.H.4    dePamphilis, C.W.5    Palmer, J.D.6
  • 21
    • 0029379716 scopus 로고
    • Two copies of a DNA element, ‘Wendy’, in the chloroplast chromosome of Chlamydomonas reinhardtii between rearranged gene clusters
    • Fan WH, Woelfle MA, Mosig G (1995) Two copies of a DNA element, ‘Wendy’, in the chloroplast chromosome of Chlamydomonas reinhardtii between rearranged gene clusters. Plant Mol Biol 29:63-80
    • (1995) Plant Mol Biol , vol.29 , pp. 63-80
    • Fan, W.H.1    Woelfle, M.A.2    Mosig, G.3
  • 22
    • 0027611630 scopus 로고
    • Relative rates of nucleotide substitution in the chloroplast genome
    • Gaut BS, Muse SV, Clegg MT (1993) Relative rates of nucleotide substitution in the chloroplast genome. Mol Phylogenet Evol 2:89-96
    • (1993) Mol Phylogenet Evol , vol.2 , pp. 89-96
    • Gaut, B.S.1    Muse, S.V.2    Clegg, M.T.3
  • 23
    • 34249935531 scopus 로고    scopus 로고
    • Distribution and phylogenetic significance of the 71-kb inversion in the plastid genome in Funariidae (Bryophyta)
    • Goffinet B, Wickett NJ, Werner O, Ros RM, Shaw AJ, Cox CJ (2007) Distribution and phylogenetic significance of the 71-kb inversion in the plastid genome in Funariidae (Bryophyta). Ann Bot 99:747-753
    • (2007) Ann Bot , vol.99 , pp. 747-753
    • Goffinet, B.1    Wickett, N.J.2    Werner, O.3    Ros, R.M.4    Shaw, A.J.5    Cox, C.J.6
  • 24
    • 42449113802 scopus 로고    scopus 로고
    • The complete nucleotide sequences of the five genetically distinct plastid genomes of Oenothera, subsection Oenothera: I. Sequence evaluation and plastome evolution
    • Greiner S, Wang X, Rauwolf U, Silber MV, Mayer K, Meurer J, Haberer G, Herrmann RG (2008) The complete nucleotide sequences of the five genetically distinct plastid genomes of Oenothera, subsection Oenothera: I. Sequence evaluation and plastome evolution. Nucleic Acids Res 36:2366-2378
    • (2008) Nucleic Acids Res , vol.36 , pp. 2366-2378
    • Greiner, S.1    Wang, X.2    Rauwolf, U.3    Silber, M.V.4    Mayer, K.5    Meurer, J.6    Haberer, G.7    Herrmann, R.G.8
  • 25
    • 21344474571 scopus 로고    scopus 로고
    • Chloroplast genetic engineering: Recent advances and future perspectives
    • Grevich JJ, Daniell H (2005) Chloroplast genetic engineering: recent advances and future perspectives. Crit Rev Plant Sci 24:83-107
    • (2005) Crit Rev Plant Sci , vol.24 , pp. 83-107
    • Grevich, J.J.1    Daniell, H.2
  • 26
    • 77649187290 scopus 로고    scopus 로고
    • Implications of the plastid genome sequence of Typha (Typhaceae, Poales) for understanding genome evolution in Poaceae
    • Guisinger MM, Chumley TW, Kuehl JV, Boore JL, Jansen RK (2010a) Implications of the plastid genome sequence of Typha (Typhaceae, Poales) for understanding genome evolution in Poaceae. J Mol Evol 70:149-166
    • (2010) J Mol Evol , vol.70 , pp. 149-166
    • Guisinger, M.M.1    Chumley, T.W.2    Kuehl, J.V.3    Boore, J.L.4    Jansen, R.K.5
  • 27
    • 78650446228 scopus 로고    scopus 로고
    • Extreme reconfiguration of plastid genomes in the angiosperm family Geraniaceae: Rearrangements, repeats, and codon usage
    • Guisinger MM, Kuehl JV, Boore JL, Jansen RK (2010b) Extreme reconfiguration of plastid genomes in the angiosperm family Geraniaceae: rearrangements, repeats, and codon usage. Mol Biol Evol 28:583-600
    • (2010) Mol Biol Evol , vol.28 , pp. 583-600
    • Guisinger, M.M.1    Kuehl, J.V.2    Boore, J.L.3    Jansen, R.K.4
  • 28
    • 43149125849 scopus 로고    scopus 로고
    • Extensive rearrangements in the chloroplast genome of Trachelium caeruleum are associated with repeats and tRNA genes
    • Haberle RC, Fourcade HM, Boore JL, Jansen RK (2008) Extensive rearrangements in the chloroplast genome of Trachelium caeruleum are associated with repeats and tRNA genes. J Mol Evol 66:350-361
    • (2008) J Mol Evol , vol.66 , pp. 350-361
    • Haberle, R.C.1    Fourcade, H.M.2    Boore, J.L.3    Jansen, R.K.4
  • 29
    • 0034477532 scopus 로고    scopus 로고
    • Erwin Baur or Carl Correns: Who really created the theory of plastid inheritance?
    • Hagemann R (2000) Erwin Baur or Carl Correns: who really created the theory of plastid inheritance? J Hered 91:435-440
    • (2000) J Hered , vol.91 , pp. 435-440
    • Hagemann, R.1
  • 30
    • 46649088563 scopus 로고    scopus 로고
    • Complete nucleotide sequence of the Cryptomeria japonicia D. Don. chloroplast genome and comparative chloroplast genomics: Diversified genomic structure of coniferous species
    • Hirao T, Watanabe A, Kurita M, Kondo T, Takata K (2008) Complete nucleotide sequence of the Cryptomeria japonicia D. Don. chloroplast genome and comparative chloroplast genomics: diversified genomic structure of coniferous species. BMC Plant Biol 8:70
    • (2008) BMC Plant Biol , vol.8 , pp. 70
    • Hirao, T.1    Watanabe, A.2    Kurita, M.3    Kondo, T.4    Takata, K.5
  • 31
    • 0023990181 scopus 로고
    • Common features of three inversions in wheat chloroplast DNA
    • Howe CJ, Barker RF, Bowman CM, Dyer TA (1988) Common features of three inversions in wheat chloroplast DNA. Curr Genet 13:343-349
    • (1988) Curr Genet , vol.13 , pp. 343-349
    • Howe, C.J.1    Barker, R.F.2    Bowman, C.M.3    Dyer, T.A.4
  • 33
    • 56449121204 scopus 로고    scopus 로고
    • Did RNA editing in plant organellar genomes originate under natural selection or through genetic drift?
    • Jobson RW, Qiu YL (2008) Did RNA editing in plant organellar genomes originate under natural selection or through genetic drift? Biol Direct 3:43
    • (2008) Biol Direct , vol.3 , pp. 43
    • Jobson, R.W.1    Qiu, Y.L.2
  • 34
    • 77958040395 scopus 로고    scopus 로고
    • Complete plastome sequences of Equisetum arvense and Isoetes flaccida: Implications for phylogeny and plastid genome evolution of early land plant lineages
    • Karol KG, Arumuganathan K, Boore JL, Duffy AM, Everett KDE et al (2010) Complete plastome sequences of Equisetum arvense and Isoetes flaccida: implications for phylogeny and plastid genome evolution of early land plant lineages. BMC Evol Biol 10:321
    • (2010) BMC Evol Biol , vol.10 , pp. 321
    • Karol, K.G.1    Arumuganathan, K.2    Boore, J.L.3    Duffy, A.M.4    Everett, K.D.E.5
  • 35
    • 0029811392 scopus 로고    scopus 로고
    • Hairpins create minute inversions in non-coding regions of chloroplast DNA
    • Kelchner SA, Wendel JF (1996) Hairpins create minute inversions in non-coding regions of chloroplast DNA. Curr Genet 30:259-262
    • (1996) Curr Genet , vol.30 , pp. 259-262
    • Kelchner, S.A.1    Wendel, J.F.2
  • 36
    • 77349112000 scopus 로고    scopus 로고
    • The endosymbiotic origin, diversification and fate of plastids
    • Keeling PJ (2010) The endosymbiotic origin, diversification and fate of plastids. Philos Trans R Soc Lond B 365:729-748
    • (2010) Philos Trans R Soc Lond B , vol.365 , pp. 729-748
    • Keeling, P.J.1
  • 37
    • 33646835562 scopus 로고    scopus 로고
    • Elimination of deleterious mutations in plastid genomes by gene conversion
    • Khakhlova O, Bock R (2006) Elimination of deleterious mutations in plastid genomes by gene conversion. Plant J 46:85-94
    • (2006) Plant J , vol.46 , pp. 85-94
    • Khakhlova, O.1    Bock, R.2
  • 38
    • 22844450753 scopus 로고    scopus 로고
    • Widespread occurrence of small inversions in the chloroplast genomes of land plants
    • Kim KJ, Lee HL (2005) Widespread occurrence of small inversions in the chloroplast genomes of land plants. Mol Cells 19:104-113
    • (2005) Mol Cells , vol.19 , pp. 104-113
    • Kim, K.J.1    Lee, H.L.2
  • 39
    • 23944506347 scopus 로고    scopus 로고
    • Two chloroplast DNA inversions originated simultaneously during the early evolution of the sunflower family (Asteraceae)
    • Kim KJ, Choi KS, Jansen RK (2005) Two chloroplast DNA inversions originated simultaneously during the early evolution of the sunflower family (Asteraceae). Mol Biol Evol 22:1783-1792
    • (2005) Mol Biol Evol , vol.22 , pp. 1783-1792
    • Kim, K.J.1    Choi, K.S.2    Jansen, R.K.3
  • 40
    • 0015501811 scopus 로고
    • Molecular size and conformation of chloroplast deoxyribonucleic acid from pea leaves
    • Kolodner R, Tewari KK (1972) Molecular size and conformation of chloroplast deoxyribonucleic acid from pea leaves. J Biol Chem 247:6355-6364
    • (1972) J Biol Chem , vol.247 , pp. 6355-6364
    • Kolodner, R.1    Tewari, K.K.2
  • 41
    • 0016802116 scopus 로고
    • Presence of displacement loops in covalently closed circular chloroplast deoxyribonucleic-acid from higher-plants
    • Kolodner R, Tewari KK (1975a) Presence of displacement loops in covalently closed circular chloroplast deoxyribonucleic-acid from higher-plants. J Biol Chem 250:8840-8847
    • (1975) J Biol Chem , vol.250 , pp. 8840-8847
    • Kolodner, R.1    Tewari, K.K.2
  • 42
    • 0016753583 scopus 로고
    • Chloroplast DNA from higher plants replicates by both the Cairns and the rolling circle mechanism
    • Kolodner R, Tewari KK (1975b) Chloroplast DNA from higher plants replicates by both the Cairns and the rolling circle mechanism. Nature 256:708-711
    • (1975) Nature , vol.256 , pp. 708-711
    • Kolodner, R.1    Tewari, K.K.2
  • 43
    • 50849113730 scopus 로고    scopus 로고
    • From chloroplasts to “cryptic” plastids: Evolution of plastid genomes in parasitic plants
    • Krause K (2008) From chloroplasts to “cryptic” plastids: evolution of plastid genomes in parasitic plants. Curr Genet 54:111-121
    • (2008) Curr Genet , vol.54 , pp. 111-121
    • Krause, K.1
  • 44
    • 67649124134 scopus 로고    scopus 로고
    • A comparative approach to elucidate chloroplast genome replication
    • Krishnan NM, Rao BJ (2009) A comparative approach to elucidate chloroplast genome replication. BMC Genomics 10:237
    • (2009) BMC Genomics , vol.10 , pp. 237
    • Krishnan, N.M.1    Rao, B.J.2
  • 46
    • 4444336532 scopus 로고    scopus 로고
    • Plastid-expressed betaine aldehyde dehydrogenase gene in carrot cultured cells, roots, and leaves confers enhanced salt tolerance
    • Kumar S, Dhingra A, Daniell H (2004a) Plastid-expressed betaine aldehyde dehydrogenase gene in carrot cultured cells, roots, and leaves confers enhanced salt tolerance. Plant Physiol 136:2843-2854
    • (2004) Plant Physiol , vol.136 , pp. 2843-2854
    • Kumar, S.1    Dhingra, A.2    Daniell, H.3
  • 47
    • 12444289959 scopus 로고    scopus 로고
    • Stable transformation of the cotton plastid genome and maternal inheritance of transgenes
    • Kumar S, Dhingra A, Daniell H (2004b) Stable transformation of the cotton plastid genome and maternal inheritance of transgenes. Plant Mol Biol 56:203-216
    • (2004) Plant Mol Biol , vol.56 , pp. 203-216
    • Kumar, S.1    Dhingra, A.2    Daniell, H.3
  • 48
    • 0002063506 scopus 로고    scopus 로고
    • Chloroplast DNA replication: Mechanism, enzymes and replication origins
    • Kunnimalaiyaan M, Nielsen BL (1997a) Chloroplast DNA replication: mechanism, enzymes and replication origins. J Plant Biochem Biot 6:1-7
    • (1997) J Plant Biochem Biot , vol.6 , pp. 1-7
    • Kunnimalaiyaan, M.1    Nielsen, B.L.2
  • 49
    • 0030766634 scopus 로고    scopus 로고
    • Fine mapping of replication origins (oriA and oriB) in Nicotiana tabacum chloroplast DNA
    • Kunnimalaiyaan M, Nielsen BL (1997b) Fine mapping of replication origins (oriA and oriB) in Nicotiana tabacum chloroplast DNA. Nucleic Acids Res 25:3681-3686
    • (1997) Nucleic Acids Res , vol.25 , pp. 3681-3686
    • Kunnimalaiyaan, M.1    Nielsen, B.L.2
  • 50
    • 0042307520 scopus 로고    scopus 로고
    • Gene transfer from organelles to the nucleus: Frequent and in big chunks
    • MartinW(2003) Gene transfer from organelles to the nucleus: frequent and in big chunks. Proc Natl Acad Sci U S A 100:8612-8614
    • (2003) Proc Natl Acad Sci U S A , vol.100 , pp. 8612-8614
    • Martin, W.1
  • 51
    • 0002160837 scopus 로고    scopus 로고
    • Gene transfer from organelles to the nucleus: How much, what happens, and why?
    • Martin W, Herrmann RG (1998) Gene transfer from organelles to the nucleus: how much, what happens, and why? Plant Physiol 118:9-17
    • (1998) Plant Physiol , vol.118 , pp. 9-17
    • Martin, W.1    Herrmann, R.G.2
  • 52
    • 0032743643 scopus 로고    scopus 로고
    • Annotated English translation of Mereschkowsky’s 1905 paper “Über Natur und Ursprung der Chromatophoren im Pflanzenreiche
    • Martin W, Kowallik KV (1999) Annotated English translation of Mereschkowsky’s 1905 paper “Über Natur und Ursprung der Chromatophoren im Pflanzenreiche”. Eur J Phycol 34:287-295
    • (1999) Eur J Phycol , vol.34 , pp. 287-295
    • Martin, W.1    Kowallik, K.V.2
  • 53
    • 0037126071 scopus 로고    scopus 로고
    • Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus
    • Martin W, Rujan T, Richly E, Hansen A, Cornelsen S et al (2002) Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus. Proc Natl Acad Sci USA 99:12246-12251
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 12246-12251
    • Martin, W.1    Rujan, T.2    Richly, E.3    Hansen, A.4    Cornelsen, S.5
  • 54
    • 0001204463 scopus 로고
    • Über Natur und Ursprung der Chromatophoren im Pflanzenreiche
    • Mereschkowski KS (1905) Über Natur und Ursprung der Chromatophoren im Pflanzenreiche. Biol Centralbl 25(593-604):689-691
    • (1905) Biol Centralbl , vol.25 , Issue.593-604 , pp. 689-691
    • Mereschkowski, K.S.1
  • 55
    • 0024692036 scopus 로고
    • Dispersed repeats and structural reorganization in subclover chloroplast DNA
    • Milligan BG, Hmpton JN, Palmer JD (1989) Dispersed repeats and structural reorganization in subclover chloroplast DNA. Mol Biol Evol 6:355-368
    • (1989) Mol Biol Evol , vol.6 , pp. 355-368
    • Milligan, B.G.1    Hmpton, J.N.2    Palmer, J.D.3
  • 56
    • 0036776141 scopus 로고    scopus 로고
    • Functional analysis of plastid DNA replication origins in tobacco by targeted inactivation
    • Mühlbauer SK, Lössl A, Tzekova L, Zou ZR, Koop HU (2002) Functional analysis of plastid DNA replication origins in tobacco by targeted inactivation. Plant J 32:175-184
    • (2002) Plant J , vol.32 , pp. 175-184
    • Mühlbauer, S.K.1    Lössl, A.2    Tzekova, L.3    Zou, Z.R.4    Koop, H.U.5
  • 57
    • 50549201557 scopus 로고
    • The relation of recombination to mutational advance
    • Muller HJ (1964) The relation of recombination to mutational advance. Mutat Res 1:2-9
    • (1964) Mutat Res , vol.1 , pp. 2-9
    • Muller, H.J.1
  • 58
    • 0033955649 scopus 로고    scopus 로고
    • Examining rates and patterns of nucleotide substitution in plants
    • Muse SV (2000) Examining rates and patterns of nucleotide substitution in plants. Plant Mol Biol 42:25-43
    • (2000) Plant Mol Biol , vol.42 , pp. 25-43
    • Muse, S.V.1
  • 59
    • 0030984551 scopus 로고    scopus 로고
    • Comparing patterns of nucleotide substitution rates among chloroplast loci using the relative ratio test
    • Muse SV, Gaut BS (1997) Comparing patterns of nucleotide substitution rates among chloroplast loci using the relative ratio test. Genetics 146:393-399
    • (1997) Genetics , vol.146 , pp. 393-399
    • Muse, S.V.1    Gaut, B.S.2
  • 60
    • 0022546644 scopus 로고
    • Chloroplast gene organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA
    • Ohyama K, Fukuzawa H, Kohchi T, Shirai H, Sano T et al (1986) Chloroplast gene organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA. Nature 322:572-574
    • (1986) Nature , vol.322 , pp. 572-574
    • Ohyama, K.1    Fukuzawa, H.2    Kohchi, T.3    Shirai, H.4    Sano, T.5
  • 61
    • 9344270525 scopus 로고    scopus 로고
    • Changes in the structure of DNA molecules and the amount of DNA per plastid during chloroplast development in maize
    • Oldenburg DJ, Bendich AJ (2004a) Changes in the structure of DNA molecules and the amount of DNA per plastid during chloroplast development in maize. J Mol Biol 344:1311-1330
    • (2004) J Mol Biol , vol.344 , pp. 1311-1330
    • Oldenburg, D.J.1    Bendich, A.J.2
  • 62
    • 0347123538 scopus 로고    scopus 로고
    • Most chloroplast DNA of maize seedlings in linear molecules with defined ends and branched forms
    • Oldenburg DJ, Bendich AJ (2004b) Most chloroplast DNA of maize seedlings in linear molecules with defined ends and branched forms. J Mol Biol 335:953-970
    • (2004) J Mol Biol , vol.335 , pp. 953-970
    • Oldenburg, D.J.1    Bendich, A.J.2
  • 63
    • 0020658540 scopus 로고
    • Chloroplast DNA exists in two orientations
    • Palmer JD (1983) Chloroplast DNA exists in two orientations. Nature 301:92-93
    • (1983) Nature , vol.301 , pp. 92-93
    • Palmer, J.D.1
  • 64
    • 0022294484 scopus 로고
    • Comparative organization of chloroplast genomes
    • Palmer JD (1985) Comparative organization of chloroplast genomes. Annu Rev Genet 19:325-354
    • (1985) Annu Rev Genet , vol.19 , pp. 325-354
    • Palmer, J.D.1
  • 66
    • 0001595241 scopus 로고
    • Conservation of chloroplast genome structure among vascular plants
    • Palmer JD, Stein DB (1986) Conservation of chloroplast genome structure among vascular plants. Curr Genet 10:823-833
    • (1986) Curr Genet , vol.10 , pp. 823-833
    • Palmer, J.D.1    Stein, D.B.2
  • 67
    • 67651171227 scopus 로고    scopus 로고
    • Site-specific binding of a PPR protein defines and stabilizes 50 and 30 mRNA termini in chloroplasts
    • Pfalz J, Bayraktar OA, Prikryl J, Barkan A (2009) Site-specific binding of a PPR protein defines and stabilizes 50 and 30 mRNA termini in chloroplasts. EMBO J 28:2042-2052
    • (2009) EMBO J , vol.28 , pp. 2042-2052
    • Pfalz, J.1    Bayraktar, O.A.2    Prikryl, J.3    Barkan, A.4
  • 69
    • 0026598577 scopus 로고
    • Chloroplast DNA evidence on the ancient evolutionary split in vascular land plants
    • Raubeson LA, Jansen RK (1992a) Chloroplast DNA evidence on the ancient evolutionary split in vascular land plants. Science 255:1697-1699
    • (1992) Science , vol.255 , pp. 1697-1699
    • Raubeson, L.A.1    Jansen, R.K.2
  • 70
    • 0002032093 scopus 로고
    • A rare chloroplast-DNA structural mutation is shared by all conifers
    • Raubeson LA, Jansen RK (1992b) A rare chloroplast-DNA structural mutation is shared by all conifers. Biochem Syst Ecol 20:17-24
    • (1992) Biochem Syst Ecol , vol.20 , pp. 17-24
    • Raubeson, L.A.1    Jansen, R.K.2
  • 72
    • 77954724160 scopus 로고    scopus 로고
    • RecA maintains the integrity of chloroplast DNA molecules in Arabidopsis
    • Rowan BA, Oldenburg DJ, Bendich AJ (2010) RecA maintains the integrity of chloroplast DNA molecules in Arabidopsis. J Exp Bot 61:2575-2588
    • (2010) J Exp Bot , vol.61 , pp. 2575-2588
    • Rowan, B.A.1    Oldenburg, D.J.2    Bendich, A.J.3
  • 74
    • 0346887203 scopus 로고    scopus 로고
    • Organization, developmental dynamics, and evolution of plastid nucleoids
    • Sato N, Terasawa K, Miyajima K, Kabeya Y (2003) Organization, developmental dynamics, and evolution of plastid nucleoids. Int Rev Cytol 232:217-262
    • (2003) Int Rev Cytol , vol.232 , pp. 217-262
    • Sato, N.1    Terasawa, K.2    Miyajima, K.3    Kabeya, Y.4
  • 75
    • 34249784806 scopus 로고    scopus 로고
    • Targeted inactivation of the tobacco plastome origins of replication A and B
    • Scharff LB, Koop HU (2007) Targeted inactivation of the tobacco plastome origins of replication A and B. Plant J 50:782-794
    • (2007) Plant J , vol.50 , pp. 782-794
    • Scharff, L.B.1    Koop, H.U.2
  • 76
    • 0000731173 scopus 로고
    • Ueber die Entwickelung der Chlorophyllköner und Farbkörper
    • Schimper AFW (1883) Ueber die Entwickelung der Chlorophyllköner und Farbkörper. Bot Zeit 41:105-114
    • (1883) Bot Zeit , vol.41 , pp. 105-114
    • Schimper, A.F.W.1
  • 77
    • 0002860227 scopus 로고
    • Untersuchungen über die Chlorophyllköner und die ihnen homologen Gebilde
    • Schimper AFW (1885) Untersuchungen über die Chlorophyllköner und die ihnen homologen Gebilde. Jahrb Wiss Bot 16:1-247
    • (1885) Jahrb Wiss Bot , vol.16 , pp. 1-247
    • Schimper, A.F.W.1
  • 78
    • 64049109732 scopus 로고    scopus 로고
    • RNA polyadenylation and decay in mitochondria and chloroplasts
    • Schuster G, Stern D (2009) RNA polyadenylation and decay in mitochondria and chloroplasts. Prog Mol Biol Transl Sci 85:393-422
    • (2009) Prog Mol Biol Transl Sci , vol.85 , pp. 393-422
    • Schuster, G.1    Stern, D.2
  • 79
    • 10644266747 scopus 로고    scopus 로고
    • Rubisco without the Calvin cycle improves the carbon efficiency of developing green seeds
    • Schwender J, Goffman F, Ohlrogge JB, Shachar-Hill Y (2004) Rubisco without the Calvin cycle improves the carbon efficiency of developing green seeds. Nature 432:779-782
    • (2004) Nature , vol.432 , pp. 779-782
    • Schwender, J.1    Goffman, F.2    Ohlrogge, J.B.3    Shachar-Hill, Y.4
  • 80
    • 34247099367 scopus 로고    scopus 로고
    • DNA binding and partial nucleoid localization of the chloroplast stromal enzyme ferredoxin: Sulfite reductase
    • Sekine K, Fujiwara M, Nakayama M, Takao T, Hase T, Sato N (2007) DNA binding and partial nucleoid localization of the chloroplast stromal enzyme ferredoxin: sulfite reductase. FEBS J 274: 2054-2069
    • (2007) FEBS J , vol.274 , pp. 2054-2069
    • Sekine, K.1    Fujiwara, M.2    Nakayama, M.3    Takao, T.4    Hase, T.5    Sato, N.6
  • 81
    • 84968989005 scopus 로고
    • The complete nucleotide sequence of tobacco chloroplast genome: Its gene organization and expression
    • Shinozaki K, Ohme M, Tanaka M, Wakasugi T, Hayashida N et al (1986) The complete nucleotide sequence of tobacco chloroplast genome: its gene organization and expression. EMBO J 5:2043-2049
    • (1986) EMBO J , vol.5 , pp. 2043-2049
    • Shinozaki, K.1    Ohme, M.2    Tanaka, M.3    Wakasugi, T.4    Hayashida, N.5
  • 82
    • 0032861138 scopus 로고    scopus 로고
    • Stable chloroplast transformation in potato: Use of green fluorescent protein as a plastid marker
    • Sidorov VA, KastenD, Pang SZ, Hajdukiewicz PTJ, Staub JM, Nehra NS (1999) Stable chloroplast transformation in potato: use of green fluorescent protein as a plastid marker. Plant J 19:209-216
    • (1999) Plant J , vol.19 , pp. 209-216
    • Sidorov, V.A.1    Kasten, D.2    Pang, S.Z.3    Hajdukiewicz, P.T.J.4    Staub, J.M.5    Nehra, N.S.6
  • 83
    • 1842335092 scopus 로고
    • Structural evolution and flip-flop recombination of chloroplast DNA in the fern genus Osmunda
    • Stein DB, Palmer JD, Thompson WF (1986) Structural evolution and flip-flop recombination of chloroplast DNA in the fern genus Osmunda. Curr Genet 10:835-841
    • (1986) Curr Genet , vol.10 , pp. 835-841
    • Stein, D.B.1    Palmer, J.D.2    Thompson, W.F.3
  • 85
    • 0041858082 scopus 로고    scopus 로고
    • History of chloroplast genomics
    • Sugiura M (2003) History of chloroplast genomics. Photosynth Res 76:371-377
    • (2003) Photosynth Res , vol.76 , pp. 371-377
    • Sugiura, M.1
  • 88
    • 33646890404 scopus 로고    scopus 로고
    • The chloroplast genome sequence of Chara vulgaris sheds new light into the closest green algal relatives of land plants
    • Turmel M, Otis C, Lemieux C (2006) The chloroplast genome sequence of Chara vulgaris sheds new light into the closest green algal relatives of land plants. Mol Biol Evol 23:1324-1338
    • (2006) Mol Biol Evol , vol.23 , pp. 1324-1338
    • Turmel, M.1    Otis, C.2    Lemieux, C.3
  • 89
    • 42049111811 scopus 로고    scopus 로고
    • A protocol for expression of foreign genes in chloroplasts
    • Verma D, Samson NP, Koya V, Daniell H (2008) A protocol for expression of foreign genes in chloroplasts. Nat Protoc 3:739-758
    • (2008) Nat Protoc , vol.3 , pp. 739-758
    • Verma, D.1    Samson, N.P.2    Koya, V.3    Daniell, H.4
  • 90
    • 0036574856 scopus 로고    scopus 로고
    • Growth and decline of introns
    • Vinogradov AE (2002) Growth and decline of introns. Trends Genet 18:232-236
    • (2002) Trends Genet , vol.18 , pp. 232-236
    • Vinogradov, A.E.1
  • 91
    • 0345062264 scopus 로고    scopus 로고
    • Comparative analysis of splicing of the complete set of chloroplast group II introns in three higher plant mutants
    • Vogel J, Borner T, Hess WR(1999) Comparative analysis of splicing of the complete set of chloroplast group II introns in three higher plant mutants. Nucleic Acids Res 27:3866-3874
    • (1999) Nucleic Acids Res , vol.27 , pp. 3866-3874
    • Vogel, J.1    Borner, T.2    Hess, W.R.3
  • 92
    • 0022532186 scopus 로고
    • Why mitochondria need a genome
    • von Heijne G (1986) Why mitochondria need a genome. FEBS Lett 198:1-4
    • (1986) FEBS Lett , vol.198 , pp. 1-4
    • von Heijne, G.1
  • 93
    • 34548410837 scopus 로고    scopus 로고
    • Transfer of chloroplast genomic DNA to mitochondrial genome occurred at least 300 MYA
    • Wang D, Wu YW, Shih ACC, Wu CS, Wang YN, Chaw SM (2007) Transfer of chloroplast genomic DNA to mitochondrial genome occurred at least 300 MYA. Mol Biol Evol 24:2040-2048
    • (2007) Mol Biol Evol , vol.24 , pp. 2040-2048
    • Wang, D.1    Wu, Y.W.2    Shih, A.C.C.3    Wu, C.S.4    Wang, Y.N.5    Chaw, S.M.6
  • 94
  • 96
    • 0023953590 scopus 로고
    • Complex RNA maturation in chloroplasts. The psbB operon from spinach
    • Westhoff P, Herrmann RG (1988) Complex RNA maturation in chloroplasts. The psbB operon from spinach. Eur J Biochem 171:551-564
    • (1988) Eur J Biochem , vol.171 , pp. 551-564
    • Westhoff, P.1    Herrmann, R.G.2
  • 97
    • 79957927000 scopus 로고    scopus 로고
    • The evolution of the plastid chromosome in land plants: Gene content, gene order, gene function
    • Wicke S, Schneeweiss GM, dePamphilis C, Müller KF, Quandt D (2011) The evolution of the plastid chromosome in land plants: gene content, gene order, gene function. Plant Mol Biol 76:273-297
    • (2011) Plant Mol Biol , vol.76 , pp. 273-297
    • Wicke, S.1    Schneeweiss, G.M.2    dePamphilis, C.3    Müller, K.F.4    Quandt, D.5
  • 98
    • 4444363004 scopus 로고    scopus 로고
    • High levels of RNA editing in a vascular plant chloroplast genome: Analysis of transcripts from the fern Adiantum capillus-veneris
    • Wolf PG, Rowe CA, Hasebe M (2004) High levels of RNA editing in a vascular plant chloroplast genome: analysis of transcripts from the fern Adiantum capillus-veneris. Gene 339:89-97
    • (2004) Gene , vol.339 , pp. 89-97
    • Wolf, P.G.1    Rowe, C.A.2    Hasebe, M.3
  • 99
    • 77958046771 scopus 로고    scopus 로고
    • The evolution of chloroplast genome structure in ferns
    • Wolf PG, Roper JM, Duffy AM (2010) The evolution of chloroplast genome structure in ferns. Genome 53:731-738
    • (2010) Genome , vol.53 , pp. 731-738
    • Wolf, P.G.1    Roper, J.M.2    Duffy, A.M.3
  • 101
    • 0023462635 scopus 로고
    • Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs
    • Wolfe KH, Li W-H, Sharp PM (1987) Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs. Proc Natl Acad Sci U S A 84:9054-9058
    • (1987) Proc Natl Acad Sci U S A , vol.84 , pp. 9054-9058
    • Wolfe, K.H.1    Li, W.-H.2    Sharp, P.M.3
  • 102
    • 0026447426 scopus 로고
    • Functions and evolution of a minimal plastid genome from a nonphotosynthetic parasitic plant
    • Wolfe KH, Morden CW, Palmer JD (1992) Functions and evolution of a minimal plastid genome from a nonphotosynthetic parasitic plant. Proc Natl Acad Sci U S A 89:10648-10652
    • (1992) Proc Natl Acad Sci U S A , vol.89 , pp. 10648-10652
    • Wolfe, K.H.1    Morden, C.W.2    Palmer, J.D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.