-
1
-
-
0026556851
-
Protein-phosphorylation in regulation of photosynthesis
-
Allen JF (1992) Protein-phosphorylation in regulation of photosynthesis. Biochim Biophys Acta 1098:275-335
-
(1992)
Biochim Biophys Acta
, vol.1098
, pp. 275-335
-
-
Allen, J.F.1
-
2
-
-
0037295044
-
Why chloroplasts and mitochondria contain genomes
-
Allen JF (2003) Why chloroplasts and mitochondria contain genomes. Comp Funct Genomics 4:31-36
-
(2003)
Comp Funct Genomics
, vol.4
, pp. 31-36
-
-
Allen, J.F.1
-
3
-
-
0001112913
-
Das Wesen und die Erblichkeitsverhältnisse der “Varietates albomarginatae hort.” von Pelargonium zonale
-
Baur E (1909) Das Wesen und die Erblichkeitsverhältnisse der “Varietates albomarginatae hort.” von Pelargonium zonale. Ztschr Indukt Abstammungs Vererbungsl 1:330-351
-
(1909)
Ztschr Indukt Abstammungs Vererbungsl
, vol.1
, pp. 330-351
-
-
Baur, E.1
-
5
-
-
3142719794
-
Circular chloroplast chromosomes: The grand illusion
-
Bendich AJ (2004) Circular chloroplast chromosomes: the grand illusion. Plant Cell 16:1661-1666
-
(2004)
Plant Cell
, vol.16
, pp. 1661-1666
-
-
Bendich, A.J.1
-
6
-
-
34548829676
-
Structure, function, and inheritance of plastid genomes
-
Bock R (2007) Structure, function, and inheritance of plastid genomes. Cell Mol Biol Plast 19:29-63
-
(2007)
Cell Mol Biol Plast
, vol.19
, pp. 29-63
-
-
Bock, R.1
-
7
-
-
0001433918
-
Chloroplast DNA levels and the control of chloroplast division in light-grown wheat leaves
-
Boffey SA, Leech RM (1982) Chloroplast DNA levels and the control of chloroplast division in light-grown wheat leaves. Plant Physiol 69:1387-1391
-
(1982)
Plant Physiol
, vol.69
, pp. 1387-1391
-
-
Boffey, S.A.1
Leech, R.M.2
-
8
-
-
70349335267
-
The current structural and functional understanding of APOBEC deaminases
-
Bransteitter R, Prochnow C, Chen XJS (2009) The current structural and functional understanding of APOBEC deaminases. Cell Mol Life Sci 66:3137-3147
-
(2009)
Cell Mol Life Sci
, vol.66
, pp. 3137-3147
-
-
Bransteitter, R.1
Prochnow, C.2
Chen, X.J.S.3
-
9
-
-
77958495156
-
The exceptionally large chloroplast genome of the green alga Floydiella terrestris illuminates the evolutionary history of the Chlorophyceae
-
Brouard JS, Otis C, Lemieux C, Turmel M (2010) The exceptionally large chloroplast genome of the green alga Floydiella terrestris illuminates the evolutionary history of the Chlorophyceae. Genome Biol Evol 2:240-256
-
(2010)
Genome Biol Evol
, vol.2
, pp. 240-256
-
-
Brouard, J.S.1
Otis, C.2
Lemieux, C.3
Turmel, M.4
-
11
-
-
65349104518
-
Extensive reorganization of the plastid genome of Trifolium subterraneum (Fabaceae) is associated with numerous repeated sequences and novel DNA insertions
-
Cai ZQ, Guisinger M, Kim HG, Ruck E, Blazier JC, McMurtry V, Kuehl JV, Boore J, Jansen RK (2008) Extensive reorganization of the plastid genome of Trifolium subterraneum (Fabaceae) is associated with numerous repeated sequences and novel DNA insertions. J Mol Evol 67:696-704
-
(2008)
J Mol Evol
, vol.67
, pp. 696-704
-
-
Cai, Z.Q.1
Guisinger, M.2
Kim, H.G.3
Ruck, E.4
Blazier, J.C.5
McMurtry, V.6
Kuehl, J.V.7
Boore, J.8
Jansen, R.K.9
-
12
-
-
58549083352
-
Evolution of small inversions in chloroplast genome: A case study from a recurrent inversion in angiosperms
-
Catalano SA, Saidman BO, Vilardi JC (2009) Evolution of small inversions in chloroplast genome: a case study from a recurrent inversion in angiosperms. Cladistics 25:93-104
-
(2009)
Cladistics
, vol.25
, pp. 93-104
-
-
Catalano, S.A.1
Saidman, B.O.2
Vilardi, J.C.3
-
13
-
-
0037154314
-
Chloroplast evolution: Secondary symbiogenesis and multiple losses
-
Cavalier-Smith T (2002) Chloroplast evolution: secondary symbiogenesis and multiple losses. Curr Biol 12:R62-R64
-
(2002)
Curr Biol
, vol.12
, pp. R62-R64
-
-
Cavalier-Smith, T.1
-
14
-
-
45849093619
-
Gene flow, risk assessment and the environmental release of transgenic plants
-
Chandler S, Dunwell JM (2008) Gene flow, risk assessment and the environmental release of transgenic plants. Crit Rev Plant Sci 27:25-49
-
(2008)
Crit Rev Plant Sci
, vol.27
, pp. 25-49
-
-
Chandler, S.1
Dunwell, J.M.2
-
15
-
-
85008270713
-
Cytochemical studies on chloroplasts. I. Cytologic demonstration of nucleic acids in chloroplasts
-
Chiba Y (1951) Cytochemical studies on chloroplasts. I. Cytologic demonstration of nucleic acids in chloroplasts. Cytologia 16:259-264
-
(1951)
Cytologia
, vol.16
, pp. 259-264
-
-
Chiba, Y.1
-
16
-
-
33749336062
-
The complete chloroplast genome sequence of Pelargonium × hortorum: Organization and evolution of the largest and most highly rearranged chloroplast genome of land plants
-
Chumley TW, Palmer JD, Mower JP, Fourcade HM, Calie PJ, Boore JL, Jansen RK (2006) The complete chloroplast genome sequence of Pelargonium × hortorum: organization and evolution of the largest and most highly rearranged chloroplast genome of land plants. Mol Biol Evol 23:2175-2190
-
(2006)
Mol Biol Evol
, vol.23
, pp. 2175-2190
-
-
Chumley, T.W.1
Palmer, J.D.2
Mower, J.P.3
Fourcade, H.M.4
Calie, P.J.5
Boore, J.L.6
Jansen, R.K.7
-
17
-
-
56549086194
-
Relative rates of synonymous substitutions in the mitochondrial, chloroplast and nuclear genomes of seed plants
-
Drouin G, Daoud H, Xia J (2008) Relative rates of synonymous substitutions in the mitochondrial, chloroplast and nuclear genomes of seed plants. Mol Phylogenet Evol 49:827-831
-
(2008)
Mol Phylogenet Evol
, vol.49
, pp. 827-831
-
-
Drouin, G.1
Daoud, H.2
Xia, J.3
-
18
-
-
27744504009
-
Pervasive RNA editing among hornwort rbcL transcripts except Leiosporceros
-
Duff RJ, Moore FBG (2005) Pervasive RNA editing among hornwort rbcL transcripts except Leiosporceros. J Mol Evol 61:571-578
-
(2005)
J Mol Evol
, vol.61
, pp. 571-578
-
-
Duff, R.J.1
Moore, F.B.G.2
-
19
-
-
64749112097
-
Conservation of selection on matK following an ancient loss of its flanking intron
-
Duffy AM, Kelchner SA, Wolf PG (2009) Conservation of selection on matK following an ancient loss of its flanking intron. Gene 438:17-25
-
(2009)
Gene
, vol.438
, pp. 17-25
-
-
Duffy, A.M.1
Kelchner, S.A.2
Wolf, P.G.3
-
20
-
-
0029411215
-
Transcription, splicing and editing of plastid RNAs in the nonphotosynthetic plant Epifagus virginiana
-
Ems SC, MordenCW, Dixon CK, Wolfe KH, dePamphilisCW, Palmer JD (1995) Transcription, splicing and editing of plastid RNAs in the nonphotosynthetic plant Epifagus virginiana. Plant Mol Biol 29:721-733
-
(1995)
Plant Mol Biol
, vol.29
, pp. 721-733
-
-
Ems, S.C.1
Morden, C.W.2
Dixon, C.K.3
Wolfe, K.H.4
dePamphilis, C.W.5
Palmer, J.D.6
-
21
-
-
0029379716
-
Two copies of a DNA element, ‘Wendy’, in the chloroplast chromosome of Chlamydomonas reinhardtii between rearranged gene clusters
-
Fan WH, Woelfle MA, Mosig G (1995) Two copies of a DNA element, ‘Wendy’, in the chloroplast chromosome of Chlamydomonas reinhardtii between rearranged gene clusters. Plant Mol Biol 29:63-80
-
(1995)
Plant Mol Biol
, vol.29
, pp. 63-80
-
-
Fan, W.H.1
Woelfle, M.A.2
Mosig, G.3
-
22
-
-
0027611630
-
Relative rates of nucleotide substitution in the chloroplast genome
-
Gaut BS, Muse SV, Clegg MT (1993) Relative rates of nucleotide substitution in the chloroplast genome. Mol Phylogenet Evol 2:89-96
-
(1993)
Mol Phylogenet Evol
, vol.2
, pp. 89-96
-
-
Gaut, B.S.1
Muse, S.V.2
Clegg, M.T.3
-
23
-
-
34249935531
-
Distribution and phylogenetic significance of the 71-kb inversion in the plastid genome in Funariidae (Bryophyta)
-
Goffinet B, Wickett NJ, Werner O, Ros RM, Shaw AJ, Cox CJ (2007) Distribution and phylogenetic significance of the 71-kb inversion in the plastid genome in Funariidae (Bryophyta). Ann Bot 99:747-753
-
(2007)
Ann Bot
, vol.99
, pp. 747-753
-
-
Goffinet, B.1
Wickett, N.J.2
Werner, O.3
Ros, R.M.4
Shaw, A.J.5
Cox, C.J.6
-
24
-
-
42449113802
-
The complete nucleotide sequences of the five genetically distinct plastid genomes of Oenothera, subsection Oenothera: I. Sequence evaluation and plastome evolution
-
Greiner S, Wang X, Rauwolf U, Silber MV, Mayer K, Meurer J, Haberer G, Herrmann RG (2008) The complete nucleotide sequences of the five genetically distinct plastid genomes of Oenothera, subsection Oenothera: I. Sequence evaluation and plastome evolution. Nucleic Acids Res 36:2366-2378
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 2366-2378
-
-
Greiner, S.1
Wang, X.2
Rauwolf, U.3
Silber, M.V.4
Mayer, K.5
Meurer, J.6
Haberer, G.7
Herrmann, R.G.8
-
25
-
-
21344474571
-
Chloroplast genetic engineering: Recent advances and future perspectives
-
Grevich JJ, Daniell H (2005) Chloroplast genetic engineering: recent advances and future perspectives. Crit Rev Plant Sci 24:83-107
-
(2005)
Crit Rev Plant Sci
, vol.24
, pp. 83-107
-
-
Grevich, J.J.1
Daniell, H.2
-
26
-
-
77649187290
-
Implications of the plastid genome sequence of Typha (Typhaceae, Poales) for understanding genome evolution in Poaceae
-
Guisinger MM, Chumley TW, Kuehl JV, Boore JL, Jansen RK (2010a) Implications of the plastid genome sequence of Typha (Typhaceae, Poales) for understanding genome evolution in Poaceae. J Mol Evol 70:149-166
-
(2010)
J Mol Evol
, vol.70
, pp. 149-166
-
-
Guisinger, M.M.1
Chumley, T.W.2
Kuehl, J.V.3
Boore, J.L.4
Jansen, R.K.5
-
27
-
-
78650446228
-
Extreme reconfiguration of plastid genomes in the angiosperm family Geraniaceae: Rearrangements, repeats, and codon usage
-
Guisinger MM, Kuehl JV, Boore JL, Jansen RK (2010b) Extreme reconfiguration of plastid genomes in the angiosperm family Geraniaceae: rearrangements, repeats, and codon usage. Mol Biol Evol 28:583-600
-
(2010)
Mol Biol Evol
, vol.28
, pp. 583-600
-
-
Guisinger, M.M.1
Kuehl, J.V.2
Boore, J.L.3
Jansen, R.K.4
-
28
-
-
43149125849
-
Extensive rearrangements in the chloroplast genome of Trachelium caeruleum are associated with repeats and tRNA genes
-
Haberle RC, Fourcade HM, Boore JL, Jansen RK (2008) Extensive rearrangements in the chloroplast genome of Trachelium caeruleum are associated with repeats and tRNA genes. J Mol Evol 66:350-361
-
(2008)
J Mol Evol
, vol.66
, pp. 350-361
-
-
Haberle, R.C.1
Fourcade, H.M.2
Boore, J.L.3
Jansen, R.K.4
-
29
-
-
0034477532
-
Erwin Baur or Carl Correns: Who really created the theory of plastid inheritance?
-
Hagemann R (2000) Erwin Baur or Carl Correns: who really created the theory of plastid inheritance? J Hered 91:435-440
-
(2000)
J Hered
, vol.91
, pp. 435-440
-
-
Hagemann, R.1
-
30
-
-
46649088563
-
Complete nucleotide sequence of the Cryptomeria japonicia D. Don. chloroplast genome and comparative chloroplast genomics: Diversified genomic structure of coniferous species
-
Hirao T, Watanabe A, Kurita M, Kondo T, Takata K (2008) Complete nucleotide sequence of the Cryptomeria japonicia D. Don. chloroplast genome and comparative chloroplast genomics: diversified genomic structure of coniferous species. BMC Plant Biol 8:70
-
(2008)
BMC Plant Biol
, vol.8
, pp. 70
-
-
Hirao, T.1
Watanabe, A.2
Kurita, M.3
Kondo, T.4
Takata, K.5
-
31
-
-
0023990181
-
Common features of three inversions in wheat chloroplast DNA
-
Howe CJ, Barker RF, Bowman CM, Dyer TA (1988) Common features of three inversions in wheat chloroplast DNA. Curr Genet 13:343-349
-
(1988)
Curr Genet
, vol.13
, pp. 343-349
-
-
Howe, C.J.1
Barker, R.F.2
Bowman, C.M.3
Dyer, T.A.4
-
32
-
-
19944424442
-
Methods for obtaining and analyzing whole chloroplast genome sequences
-
Jansen RK, Raubeson LA, Boore JL, dePamphilis CW, Chumley TW et al (2005) Methods for obtaining and analyzing whole chloroplast genome sequences. Methods Enzymol 395:348-384
-
(2005)
Methods Enzymol
, vol.395
, pp. 348-384
-
-
Jansen, R.K.1
Raubeson, L.A.2
Boore, J.L.3
dePamphilis, C.W.4
Chumley, T.W.5
-
33
-
-
56449121204
-
Did RNA editing in plant organellar genomes originate under natural selection or through genetic drift?
-
Jobson RW, Qiu YL (2008) Did RNA editing in plant organellar genomes originate under natural selection or through genetic drift? Biol Direct 3:43
-
(2008)
Biol Direct
, vol.3
, pp. 43
-
-
Jobson, R.W.1
Qiu, Y.L.2
-
34
-
-
77958040395
-
Complete plastome sequences of Equisetum arvense and Isoetes flaccida: Implications for phylogeny and plastid genome evolution of early land plant lineages
-
Karol KG, Arumuganathan K, Boore JL, Duffy AM, Everett KDE et al (2010) Complete plastome sequences of Equisetum arvense and Isoetes flaccida: implications for phylogeny and plastid genome evolution of early land plant lineages. BMC Evol Biol 10:321
-
(2010)
BMC Evol Biol
, vol.10
, pp. 321
-
-
Karol, K.G.1
Arumuganathan, K.2
Boore, J.L.3
Duffy, A.M.4
Everett, K.D.E.5
-
35
-
-
0029811392
-
Hairpins create minute inversions in non-coding regions of chloroplast DNA
-
Kelchner SA, Wendel JF (1996) Hairpins create minute inversions in non-coding regions of chloroplast DNA. Curr Genet 30:259-262
-
(1996)
Curr Genet
, vol.30
, pp. 259-262
-
-
Kelchner, S.A.1
Wendel, J.F.2
-
36
-
-
77349112000
-
The endosymbiotic origin, diversification and fate of plastids
-
Keeling PJ (2010) The endosymbiotic origin, diversification and fate of plastids. Philos Trans R Soc Lond B 365:729-748
-
(2010)
Philos Trans R Soc Lond B
, vol.365
, pp. 729-748
-
-
Keeling, P.J.1
-
37
-
-
33646835562
-
Elimination of deleterious mutations in plastid genomes by gene conversion
-
Khakhlova O, Bock R (2006) Elimination of deleterious mutations in plastid genomes by gene conversion. Plant J 46:85-94
-
(2006)
Plant J
, vol.46
, pp. 85-94
-
-
Khakhlova, O.1
Bock, R.2
-
38
-
-
22844450753
-
Widespread occurrence of small inversions in the chloroplast genomes of land plants
-
Kim KJ, Lee HL (2005) Widespread occurrence of small inversions in the chloroplast genomes of land plants. Mol Cells 19:104-113
-
(2005)
Mol Cells
, vol.19
, pp. 104-113
-
-
Kim, K.J.1
Lee, H.L.2
-
39
-
-
23944506347
-
Two chloroplast DNA inversions originated simultaneously during the early evolution of the sunflower family (Asteraceae)
-
Kim KJ, Choi KS, Jansen RK (2005) Two chloroplast DNA inversions originated simultaneously during the early evolution of the sunflower family (Asteraceae). Mol Biol Evol 22:1783-1792
-
(2005)
Mol Biol Evol
, vol.22
, pp. 1783-1792
-
-
Kim, K.J.1
Choi, K.S.2
Jansen, R.K.3
-
40
-
-
0015501811
-
Molecular size and conformation of chloroplast deoxyribonucleic acid from pea leaves
-
Kolodner R, Tewari KK (1972) Molecular size and conformation of chloroplast deoxyribonucleic acid from pea leaves. J Biol Chem 247:6355-6364
-
(1972)
J Biol Chem
, vol.247
, pp. 6355-6364
-
-
Kolodner, R.1
Tewari, K.K.2
-
41
-
-
0016802116
-
Presence of displacement loops in covalently closed circular chloroplast deoxyribonucleic-acid from higher-plants
-
Kolodner R, Tewari KK (1975a) Presence of displacement loops in covalently closed circular chloroplast deoxyribonucleic-acid from higher-plants. J Biol Chem 250:8840-8847
-
(1975)
J Biol Chem
, vol.250
, pp. 8840-8847
-
-
Kolodner, R.1
Tewari, K.K.2
-
42
-
-
0016753583
-
Chloroplast DNA from higher plants replicates by both the Cairns and the rolling circle mechanism
-
Kolodner R, Tewari KK (1975b) Chloroplast DNA from higher plants replicates by both the Cairns and the rolling circle mechanism. Nature 256:708-711
-
(1975)
Nature
, vol.256
, pp. 708-711
-
-
Kolodner, R.1
Tewari, K.K.2
-
43
-
-
50849113730
-
From chloroplasts to “cryptic” plastids: Evolution of plastid genomes in parasitic plants
-
Krause K (2008) From chloroplasts to “cryptic” plastids: evolution of plastid genomes in parasitic plants. Curr Genet 54:111-121
-
(2008)
Curr Genet
, vol.54
, pp. 111-121
-
-
Krause, K.1
-
44
-
-
67649124134
-
A comparative approach to elucidate chloroplast genome replication
-
Krishnan NM, Rao BJ (2009) A comparative approach to elucidate chloroplast genome replication. BMC Genomics 10:237
-
(2009)
BMC Genomics
, vol.10
, pp. 237
-
-
Krishnan, N.M.1
Rao, B.J.2
-
45
-
-
0037736768
-
RNA editing in hornwort chloroplasts makes more than half the genes functional
-
Kugita M, Yamamoto Y, Fujikawa T, Matsumoto T, Yoshinaga K (2003) RNA editing in hornwort chloroplasts makes more than half the genes functional. Nucleic Acids Res 31:2417-2423
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 2417-2423
-
-
Kugita, M.1
Yamamoto, Y.2
Fujikawa, T.3
Matsumoto, T.4
Yoshinaga, K.5
-
46
-
-
4444336532
-
Plastid-expressed betaine aldehyde dehydrogenase gene in carrot cultured cells, roots, and leaves confers enhanced salt tolerance
-
Kumar S, Dhingra A, Daniell H (2004a) Plastid-expressed betaine aldehyde dehydrogenase gene in carrot cultured cells, roots, and leaves confers enhanced salt tolerance. Plant Physiol 136:2843-2854
-
(2004)
Plant Physiol
, vol.136
, pp. 2843-2854
-
-
Kumar, S.1
Dhingra, A.2
Daniell, H.3
-
47
-
-
12444289959
-
Stable transformation of the cotton plastid genome and maternal inheritance of transgenes
-
Kumar S, Dhingra A, Daniell H (2004b) Stable transformation of the cotton plastid genome and maternal inheritance of transgenes. Plant Mol Biol 56:203-216
-
(2004)
Plant Mol Biol
, vol.56
, pp. 203-216
-
-
Kumar, S.1
Dhingra, A.2
Daniell, H.3
-
48
-
-
0002063506
-
Chloroplast DNA replication: Mechanism, enzymes and replication origins
-
Kunnimalaiyaan M, Nielsen BL (1997a) Chloroplast DNA replication: mechanism, enzymes and replication origins. J Plant Biochem Biot 6:1-7
-
(1997)
J Plant Biochem Biot
, vol.6
, pp. 1-7
-
-
Kunnimalaiyaan, M.1
Nielsen, B.L.2
-
49
-
-
0030766634
-
Fine mapping of replication origins (oriA and oriB) in Nicotiana tabacum chloroplast DNA
-
Kunnimalaiyaan M, Nielsen BL (1997b) Fine mapping of replication origins (oriA and oriB) in Nicotiana tabacum chloroplast DNA. Nucleic Acids Res 25:3681-3686
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3681-3686
-
-
Kunnimalaiyaan, M.1
Nielsen, B.L.2
-
50
-
-
0042307520
-
Gene transfer from organelles to the nucleus: Frequent and in big chunks
-
MartinW(2003) Gene transfer from organelles to the nucleus: frequent and in big chunks. Proc Natl Acad Sci U S A 100:8612-8614
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 8612-8614
-
-
Martin, W.1
-
51
-
-
0002160837
-
Gene transfer from organelles to the nucleus: How much, what happens, and why?
-
Martin W, Herrmann RG (1998) Gene transfer from organelles to the nucleus: how much, what happens, and why? Plant Physiol 118:9-17
-
(1998)
Plant Physiol
, vol.118
, pp. 9-17
-
-
Martin, W.1
Herrmann, R.G.2
-
52
-
-
0032743643
-
Annotated English translation of Mereschkowsky’s 1905 paper “Über Natur und Ursprung der Chromatophoren im Pflanzenreiche
-
Martin W, Kowallik KV (1999) Annotated English translation of Mereschkowsky’s 1905 paper “Über Natur und Ursprung der Chromatophoren im Pflanzenreiche”. Eur J Phycol 34:287-295
-
(1999)
Eur J Phycol
, vol.34
, pp. 287-295
-
-
Martin, W.1
Kowallik, K.V.2
-
53
-
-
0037126071
-
Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus
-
Martin W, Rujan T, Richly E, Hansen A, Cornelsen S et al (2002) Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus. Proc Natl Acad Sci USA 99:12246-12251
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 12246-12251
-
-
Martin, W.1
Rujan, T.2
Richly, E.3
Hansen, A.4
Cornelsen, S.5
-
54
-
-
0001204463
-
Über Natur und Ursprung der Chromatophoren im Pflanzenreiche
-
Mereschkowski KS (1905) Über Natur und Ursprung der Chromatophoren im Pflanzenreiche. Biol Centralbl 25(593-604):689-691
-
(1905)
Biol Centralbl
, vol.25
, Issue.593-604
, pp. 689-691
-
-
Mereschkowski, K.S.1
-
55
-
-
0024692036
-
Dispersed repeats and structural reorganization in subclover chloroplast DNA
-
Milligan BG, Hmpton JN, Palmer JD (1989) Dispersed repeats and structural reorganization in subclover chloroplast DNA. Mol Biol Evol 6:355-368
-
(1989)
Mol Biol Evol
, vol.6
, pp. 355-368
-
-
Milligan, B.G.1
Hmpton, J.N.2
Palmer, J.D.3
-
56
-
-
0036776141
-
Functional analysis of plastid DNA replication origins in tobacco by targeted inactivation
-
Mühlbauer SK, Lössl A, Tzekova L, Zou ZR, Koop HU (2002) Functional analysis of plastid DNA replication origins in tobacco by targeted inactivation. Plant J 32:175-184
-
(2002)
Plant J
, vol.32
, pp. 175-184
-
-
Mühlbauer, S.K.1
Lössl, A.2
Tzekova, L.3
Zou, Z.R.4
Koop, H.U.5
-
57
-
-
50549201557
-
The relation of recombination to mutational advance
-
Muller HJ (1964) The relation of recombination to mutational advance. Mutat Res 1:2-9
-
(1964)
Mutat Res
, vol.1
, pp. 2-9
-
-
Muller, H.J.1
-
58
-
-
0033955649
-
Examining rates and patterns of nucleotide substitution in plants
-
Muse SV (2000) Examining rates and patterns of nucleotide substitution in plants. Plant Mol Biol 42:25-43
-
(2000)
Plant Mol Biol
, vol.42
, pp. 25-43
-
-
Muse, S.V.1
-
59
-
-
0030984551
-
Comparing patterns of nucleotide substitution rates among chloroplast loci using the relative ratio test
-
Muse SV, Gaut BS (1997) Comparing patterns of nucleotide substitution rates among chloroplast loci using the relative ratio test. Genetics 146:393-399
-
(1997)
Genetics
, vol.146
, pp. 393-399
-
-
Muse, S.V.1
Gaut, B.S.2
-
60
-
-
0022546644
-
Chloroplast gene organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA
-
Ohyama K, Fukuzawa H, Kohchi T, Shirai H, Sano T et al (1986) Chloroplast gene organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA. Nature 322:572-574
-
(1986)
Nature
, vol.322
, pp. 572-574
-
-
Ohyama, K.1
Fukuzawa, H.2
Kohchi, T.3
Shirai, H.4
Sano, T.5
-
61
-
-
9344270525
-
Changes in the structure of DNA molecules and the amount of DNA per plastid during chloroplast development in maize
-
Oldenburg DJ, Bendich AJ (2004a) Changes in the structure of DNA molecules and the amount of DNA per plastid during chloroplast development in maize. J Mol Biol 344:1311-1330
-
(2004)
J Mol Biol
, vol.344
, pp. 1311-1330
-
-
Oldenburg, D.J.1
Bendich, A.J.2
-
62
-
-
0347123538
-
Most chloroplast DNA of maize seedlings in linear molecules with defined ends and branched forms
-
Oldenburg DJ, Bendich AJ (2004b) Most chloroplast DNA of maize seedlings in linear molecules with defined ends and branched forms. J Mol Biol 335:953-970
-
(2004)
J Mol Biol
, vol.335
, pp. 953-970
-
-
Oldenburg, D.J.1
Bendich, A.J.2
-
63
-
-
0020658540
-
Chloroplast DNA exists in two orientations
-
Palmer JD (1983) Chloroplast DNA exists in two orientations. Nature 301:92-93
-
(1983)
Nature
, vol.301
, pp. 92-93
-
-
Palmer, J.D.1
-
64
-
-
0022294484
-
Comparative organization of chloroplast genomes
-
Palmer JD (1985) Comparative organization of chloroplast genomes. Annu Rev Genet 19:325-354
-
(1985)
Annu Rev Genet
, vol.19
, pp. 325-354
-
-
Palmer, J.D.1
-
65
-
-
0001856419
-
Plastid chromosomes: Structure and evolution
-
Bogorad L, Vasil IK (eds), Academic, San Diego
-
Palmer JD (1991) Plastid chromosomes: structure and evolution. In: Bogorad L, Vasil IK (eds) Cell culture and somatic cell genetics of plants, vol 7A, Molecular biology of plastids. Academic, San Diego, pp 5-53
-
(1991)
Cell culture and somatic cell genetics of plants, vol 7A, Molecular biology of plastids
, pp. 5-53
-
-
Palmer, J.D.1
-
66
-
-
0001595241
-
Conservation of chloroplast genome structure among vascular plants
-
Palmer JD, Stein DB (1986) Conservation of chloroplast genome structure among vascular plants. Curr Genet 10:823-833
-
(1986)
Curr Genet
, vol.10
, pp. 823-833
-
-
Palmer, J.D.1
Stein, D.B.2
-
67
-
-
67651171227
-
Site-specific binding of a PPR protein defines and stabilizes 50 and 30 mRNA termini in chloroplasts
-
Pfalz J, Bayraktar OA, Prikryl J, Barkan A (2009) Site-specific binding of a PPR protein defines and stabilizes 50 and 30 mRNA termini in chloroplasts. EMBO J 28:2042-2052
-
(2009)
EMBO J
, vol.28
, pp. 2042-2052
-
-
Pfalz, J.1
Bayraktar, O.A.2
Prikryl, J.3
Barkan, A.4
-
69
-
-
0026598577
-
Chloroplast DNA evidence on the ancient evolutionary split in vascular land plants
-
Raubeson LA, Jansen RK (1992a) Chloroplast DNA evidence on the ancient evolutionary split in vascular land plants. Science 255:1697-1699
-
(1992)
Science
, vol.255
, pp. 1697-1699
-
-
Raubeson, L.A.1
Jansen, R.K.2
-
70
-
-
0002032093
-
A rare chloroplast-DNA structural mutation is shared by all conifers
-
Raubeson LA, Jansen RK (1992b) A rare chloroplast-DNA structural mutation is shared by all conifers. Biochem Syst Ecol 20:17-24
-
(1992)
Biochem Syst Ecol
, vol.20
, pp. 17-24
-
-
Raubeson, L.A.1
Jansen, R.K.2
-
72
-
-
77954724160
-
RecA maintains the integrity of chloroplast DNA molecules in Arabidopsis
-
Rowan BA, Oldenburg DJ, Bendich AJ (2010) RecA maintains the integrity of chloroplast DNA molecules in Arabidopsis. J Exp Bot 61:2575-2588
-
(2010)
J Exp Bot
, vol.61
, pp. 2575-2588
-
-
Rowan, B.A.1
Oldenburg, D.J.2
Bendich, A.J.3
-
74
-
-
0346887203
-
Organization, developmental dynamics, and evolution of plastid nucleoids
-
Sato N, Terasawa K, Miyajima K, Kabeya Y (2003) Organization, developmental dynamics, and evolution of plastid nucleoids. Int Rev Cytol 232:217-262
-
(2003)
Int Rev Cytol
, vol.232
, pp. 217-262
-
-
Sato, N.1
Terasawa, K.2
Miyajima, K.3
Kabeya, Y.4
-
75
-
-
34249784806
-
Targeted inactivation of the tobacco plastome origins of replication A and B
-
Scharff LB, Koop HU (2007) Targeted inactivation of the tobacco plastome origins of replication A and B. Plant J 50:782-794
-
(2007)
Plant J
, vol.50
, pp. 782-794
-
-
Scharff, L.B.1
Koop, H.U.2
-
76
-
-
0000731173
-
Ueber die Entwickelung der Chlorophyllköner und Farbkörper
-
Schimper AFW (1883) Ueber die Entwickelung der Chlorophyllköner und Farbkörper. Bot Zeit 41:105-114
-
(1883)
Bot Zeit
, vol.41
, pp. 105-114
-
-
Schimper, A.F.W.1
-
77
-
-
0002860227
-
Untersuchungen über die Chlorophyllköner und die ihnen homologen Gebilde
-
Schimper AFW (1885) Untersuchungen über die Chlorophyllköner und die ihnen homologen Gebilde. Jahrb Wiss Bot 16:1-247
-
(1885)
Jahrb Wiss Bot
, vol.16
, pp. 1-247
-
-
Schimper, A.F.W.1
-
78
-
-
64049109732
-
RNA polyadenylation and decay in mitochondria and chloroplasts
-
Schuster G, Stern D (2009) RNA polyadenylation and decay in mitochondria and chloroplasts. Prog Mol Biol Transl Sci 85:393-422
-
(2009)
Prog Mol Biol Transl Sci
, vol.85
, pp. 393-422
-
-
Schuster, G.1
Stern, D.2
-
79
-
-
10644266747
-
Rubisco without the Calvin cycle improves the carbon efficiency of developing green seeds
-
Schwender J, Goffman F, Ohlrogge JB, Shachar-Hill Y (2004) Rubisco without the Calvin cycle improves the carbon efficiency of developing green seeds. Nature 432:779-782
-
(2004)
Nature
, vol.432
, pp. 779-782
-
-
Schwender, J.1
Goffman, F.2
Ohlrogge, J.B.3
Shachar-Hill, Y.4
-
80
-
-
34247099367
-
DNA binding and partial nucleoid localization of the chloroplast stromal enzyme ferredoxin: Sulfite reductase
-
Sekine K, Fujiwara M, Nakayama M, Takao T, Hase T, Sato N (2007) DNA binding and partial nucleoid localization of the chloroplast stromal enzyme ferredoxin: sulfite reductase. FEBS J 274: 2054-2069
-
(2007)
FEBS J
, vol.274
, pp. 2054-2069
-
-
Sekine, K.1
Fujiwara, M.2
Nakayama, M.3
Takao, T.4
Hase, T.5
Sato, N.6
-
81
-
-
84968989005
-
The complete nucleotide sequence of tobacco chloroplast genome: Its gene organization and expression
-
Shinozaki K, Ohme M, Tanaka M, Wakasugi T, Hayashida N et al (1986) The complete nucleotide sequence of tobacco chloroplast genome: its gene organization and expression. EMBO J 5:2043-2049
-
(1986)
EMBO J
, vol.5
, pp. 2043-2049
-
-
Shinozaki, K.1
Ohme, M.2
Tanaka, M.3
Wakasugi, T.4
Hayashida, N.5
-
82
-
-
0032861138
-
Stable chloroplast transformation in potato: Use of green fluorescent protein as a plastid marker
-
Sidorov VA, KastenD, Pang SZ, Hajdukiewicz PTJ, Staub JM, Nehra NS (1999) Stable chloroplast transformation in potato: use of green fluorescent protein as a plastid marker. Plant J 19:209-216
-
(1999)
Plant J
, vol.19
, pp. 209-216
-
-
Sidorov, V.A.1
Kasten, D.2
Pang, S.Z.3
Hajdukiewicz, P.T.J.4
Staub, J.M.5
Nehra, N.S.6
-
83
-
-
1842335092
-
Structural evolution and flip-flop recombination of chloroplast DNA in the fern genus Osmunda
-
Stein DB, Palmer JD, Thompson WF (1986) Structural evolution and flip-flop recombination of chloroplast DNA in the fern genus Osmunda. Curr Genet 10:835-841
-
(1986)
Curr Genet
, vol.10
, pp. 835-841
-
-
Stein, D.B.1
Palmer, J.D.2
Thompson, W.F.3
-
85
-
-
0041858082
-
History of chloroplast genomics
-
Sugiura M (2003) History of chloroplast genomics. Photosynth Res 76:371-377
-
(2003)
Photosynth Res
, vol.76
, pp. 371-377
-
-
Sugiura, M.1
-
88
-
-
33646890404
-
The chloroplast genome sequence of Chara vulgaris sheds new light into the closest green algal relatives of land plants
-
Turmel M, Otis C, Lemieux C (2006) The chloroplast genome sequence of Chara vulgaris sheds new light into the closest green algal relatives of land plants. Mol Biol Evol 23:1324-1338
-
(2006)
Mol Biol Evol
, vol.23
, pp. 1324-1338
-
-
Turmel, M.1
Otis, C.2
Lemieux, C.3
-
89
-
-
42049111811
-
A protocol for expression of foreign genes in chloroplasts
-
Verma D, Samson NP, Koya V, Daniell H (2008) A protocol for expression of foreign genes in chloroplasts. Nat Protoc 3:739-758
-
(2008)
Nat Protoc
, vol.3
, pp. 739-758
-
-
Verma, D.1
Samson, N.P.2
Koya, V.3
Daniell, H.4
-
90
-
-
0036574856
-
Growth and decline of introns
-
Vinogradov AE (2002) Growth and decline of introns. Trends Genet 18:232-236
-
(2002)
Trends Genet
, vol.18
, pp. 232-236
-
-
Vinogradov, A.E.1
-
91
-
-
0345062264
-
Comparative analysis of splicing of the complete set of chloroplast group II introns in three higher plant mutants
-
Vogel J, Borner T, Hess WR(1999) Comparative analysis of splicing of the complete set of chloroplast group II introns in three higher plant mutants. Nucleic Acids Res 27:3866-3874
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 3866-3874
-
-
Vogel, J.1
Borner, T.2
Hess, W.R.3
-
92
-
-
0022532186
-
Why mitochondria need a genome
-
von Heijne G (1986) Why mitochondria need a genome. FEBS Lett 198:1-4
-
(1986)
FEBS Lett
, vol.198
, pp. 1-4
-
-
von Heijne, G.1
-
93
-
-
34548410837
-
Transfer of chloroplast genomic DNA to mitochondrial genome occurred at least 300 MYA
-
Wang D, Wu YW, Shih ACC, Wu CS, Wang YN, Chaw SM (2007) Transfer of chloroplast genomic DNA to mitochondrial genome occurred at least 300 MYA. Mol Biol Evol 24:2040-2048
-
(2007)
Mol Biol Evol
, vol.24
, pp. 2040-2048
-
-
Wang, D.1
Wu, Y.W.2
Shih, A.C.C.3
Wu, C.S.4
Wang, Y.N.5
Chaw, S.M.6
-
94
-
-
85014206439
-
-
Elsevier/Academic, San Diego
-
Wayne R (2009) Plant cell biology. Elsevier/Academic, San Diego
-
(2009)
Plant cell biology
-
-
Wayne, R.1
-
95
-
-
73649144195
-
Detailed analysis of a contiguous 22-Mb region of the maize genome
-
Wei FS, Stein JC, Liang CZ, Zhang JW, Fulton RS et al (2009) Detailed analysis of a contiguous 22-Mb region of the maize genome. PLoS Genet 5:e1000728
-
(2009)
PLoS Genet
, vol.5
-
-
Wei, F.S.1
Stein, J.C.2
Liang, C.Z.3
Zhang, J.W.4
Fulton, R.S.5
-
96
-
-
0023953590
-
Complex RNA maturation in chloroplasts. The psbB operon from spinach
-
Westhoff P, Herrmann RG (1988) Complex RNA maturation in chloroplasts. The psbB operon from spinach. Eur J Biochem 171:551-564
-
(1988)
Eur J Biochem
, vol.171
, pp. 551-564
-
-
Westhoff, P.1
Herrmann, R.G.2
-
97
-
-
79957927000
-
The evolution of the plastid chromosome in land plants: Gene content, gene order, gene function
-
Wicke S, Schneeweiss GM, dePamphilis C, Müller KF, Quandt D (2011) The evolution of the plastid chromosome in land plants: gene content, gene order, gene function. Plant Mol Biol 76:273-297
-
(2011)
Plant Mol Biol
, vol.76
, pp. 273-297
-
-
Wicke, S.1
Schneeweiss, G.M.2
dePamphilis, C.3
Müller, K.F.4
Quandt, D.5
-
98
-
-
4444363004
-
High levels of RNA editing in a vascular plant chloroplast genome: Analysis of transcripts from the fern Adiantum capillus-veneris
-
Wolf PG, Rowe CA, Hasebe M (2004) High levels of RNA editing in a vascular plant chloroplast genome: analysis of transcripts from the fern Adiantum capillus-veneris. Gene 339:89-97
-
(2004)
Gene
, vol.339
, pp. 89-97
-
-
Wolf, P.G.1
Rowe, C.A.2
Hasebe, M.3
-
99
-
-
77958046771
-
The evolution of chloroplast genome structure in ferns
-
Wolf PG, Roper JM, Duffy AM (2010) The evolution of chloroplast genome structure in ferns. Genome 53:731-738
-
(2010)
Genome
, vol.53
, pp. 731-738
-
-
Wolf, P.G.1
Roper, J.M.2
Duffy, A.M.3
-
100
-
-
79957877560
-
The evolution of chloroplast genes and genomes in ferns
-
Wolf PG, Der JP, Duffy AM, Jacobson JB, Grusz AL, Pryer KM (2011) The evolution of chloroplast genes and genomes in ferns. Plant Mol Biol 76(3-5):251-261
-
(2011)
Plant Mol Biol
, vol.76
, Issue.3-5
, pp. 251-261
-
-
Wolf, P.G.1
Der, J.P.2
Duffy, A.M.3
Jacobson, J.B.4
Grusz, A.L.5
Pryer, K.M.6
-
101
-
-
0023462635
-
Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs
-
Wolfe KH, Li W-H, Sharp PM (1987) Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs. Proc Natl Acad Sci U S A 84:9054-9058
-
(1987)
Proc Natl Acad Sci U S A
, vol.84
, pp. 9054-9058
-
-
Wolfe, K.H.1
Li, W.-H.2
Sharp, P.M.3
-
102
-
-
0026447426
-
Functions and evolution of a minimal plastid genome from a nonphotosynthetic parasitic plant
-
Wolfe KH, Morden CW, Palmer JD (1992) Functions and evolution of a minimal plastid genome from a nonphotosynthetic parasitic plant. Proc Natl Acad Sci U S A 89:10648-10652
-
(1992)
Proc Natl Acad Sci U S A
, vol.89
, pp. 10648-10652
-
-
Wolfe, K.H.1
Morden, C.W.2
Palmer, J.D.3
-
103
-
-
77649249964
-
An organellar maturase associates with multiple group II introns
-
Zoschke R, Nakamura M, Liere K, Sugiura M, Börner T, Schmitz-Linneweber C (2010) An organellar maturase associates with multiple group II introns. Proc Natl Acad Sci USA 107: 3245-3250
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 3245-3250
-
-
Zoschke, R.1
Nakamura, M.2
Liere, K.3
Sugiura, M.4
Börner, T.5
Schmitz-Linneweber, C.6
|