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Volumn 289, Issue 11, 2014, Pages 7388-7398

A trimeric lipoprotein assists in trimeric autotransporter biogenesis in enterobacteria

Author keywords

[No Author keywords available]

Indexed keywords

BIOSYNTHESIS; CELL MEMBRANES;

EID: 84896289450     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M113.513275     Document Type: Article
Times cited : (24)

References (40)
  • 1
    • 77952793285 scopus 로고    scopus 로고
    • Evolution of outer membrane β-barrels from an ancestral β hairpin
    • Remmert, M., Biegert, A., Linke, D., Lupas, A. N., and Söding, J. (2010) Evolution of outer membrane β-barrels from an ancestral β hairpin. Mol. Biol. Evol. 27, 1348-1358
    • (2010) Mol. Biol. Evol. , vol.27 , pp. 1348-1358
    • Remmert, M.1    Biegert, A.2    Linke, D.3    Lupas, A.N.4    Söding, J.5
  • 2
    • 33846593868 scopus 로고    scopus 로고
    • Gene Duplication of the Eight-stranded β-Barrel OmpX Produces a Functional Pore: A Scenario for the Evolution of Transmembrane β-Barrels
    • DOI 10.1016/j.jmb.2006.12.029, PII S0022283606017050
    • Arnold, T., Poynor, M., Nussberger, S., Lupas, A. N., and Linke, D. (2007) Gene duplication of the eight-stranded β-barrel OmpX produces a functional pore: a scenario for the evolution of transmembrane β-barrels. J. Mol. Biol. 366, 1174-1184 (Pubitemid 46186395)
    • (2007) Journal of Molecular Biology , vol.366 , Issue.4 , pp. 1174-1184
    • Arnold, T.1    Poynor, M.2    Nussberger, S.3    Lupas, A.N.4    Linke, D.5
  • 3
    • 0037284970 scopus 로고    scopus 로고
    • Transmembrane β-barrel proteins
    • Schulz, G. E. (2003) Transmembrane β-barrel proteins. Adv. Protein Chem. 63, 47-70
    • (2003) Adv. Protein Chem. , vol.63 , pp. 47-70
    • Schulz, G.E.1
  • 4
    • 84858226936 scopus 로고    scopus 로고
    • Type V secretion: Mechanism(s) of autotransport through the bacterial outer membrane
    • Leo, J. C., Grin, I., and Linke, D. (2012) Type V secretion: mechanism(s) of autotransport through the bacterial outer membrane. Philos. Trans. R. Soc. Lond. B Biol. Sci. 367, 1088-1101
    • (2012) Philos. Trans. R. Soc. Lond. B Biol. Sci. , vol.367 , pp. 1088-1101
    • Leo, J.C.1    Grin, I.2    Linke, D.3
  • 6
    • 78649888930 scopus 로고    scopus 로고
    • Serine protease autotransporters of enterobacteriaceae (SPATEs): Biogenesis and function
    • Dautin, N. (2010) Serine protease autotransporters of enterobacteriaceae (SPATEs): biogenesis and function. Toxins 2, 1179-1206
    • (2010) Toxins , vol.2 , pp. 1179-1206
    • Dautin, N.1
  • 7
    • 43349091607 scopus 로고    scopus 로고
    • Domain annotation of trimeric autotransporter adhesins - daTAA
    • DOI 10.1093/bioinformatics/btn118
    • Szczesny, P., and Lupas, A. (2008) Domain annotation of trimeric autotransporter adhesins-daTAA. Bioinformatics 24, 1251-1256 (Pubitemid 351659621)
    • (2008) Bioinformatics , vol.24 , Issue.10 , pp. 1251-1256
    • Szczesny, P.1    Lupas, A.2
  • 8
    • 33744728321 scopus 로고    scopus 로고
    • Trimeric autotransporter adhesins: Variable structure, common function
    • DOI 10.1016/j.tim.2006.04.005, PII S0966842X06000977
    • Linke, D., Riess, T., Autenrieth, I. B., Lupas, A., and Kempf, V. A. (2006) Trimeric autotransporter adhesins: variable structure, common function. Trends Microbiol. 14, 264-270 (Pubitemid 43825731)
    • (2006) Trends in Microbiology , vol.14 , Issue.6 , pp. 264-270
    • Linke, D.1    Riess, T.2    Autenrieth, I.B.3    Lupas, A.4    Kempf, V.A.J.5
  • 10
    • 79959936663 scopus 로고    scopus 로고
    • GCView: The genomic context viewer for protein homology searches
    • Grin, I., and Linke, D. (2011) GCView: the genomic context viewer for protein homology searches. Nucleic Acids Res. 39, W353-W356
    • (2011) Nucleic Acids Res. , vol.39
    • Grin, I.1    Linke, D.2
  • 11
    • 33747856166 scopus 로고    scopus 로고
    • The MPI Bioinformatics Toolkit for protein sequence analysis
    • DOI 10.1093/nar/gkl217
    • Biegert, A., Mayer, C., Remmert, M., Söding, J., and Lupas, A. N. (2006) The MPI Bioinformatics Toolkit for protein sequence analysis. Nucleic Acids Res. 34, W335-W339 (Pubitemid 44529789)
    • (2006) Nucleic Acids Research , vol.34 , Issue.WEB. SERV. ISS.
    • Biegert, A.1    Mayer, C.2    Remmert, M.3    Soding, J.4    Lupas, A.N.5
  • 12
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • DOI 10.1093/nar/25.17.3389
    • Altschul, S. F., Madden, T. L., Schäffer, A. A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D. J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402 (Pubitemid 27359211)
    • (1997) Nucleic Acids Research , vol.25 , Issue.17 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schaffer, A.A.3    Zhang, J.4    Zhang, Z.5    Miller, W.6    Lipman, D.J.7
  • 13
    • 77954288774 scopus 로고    scopus 로고
    • Dali server: Conservation mapping in 3D
    • Holm, L., and Rosenström, P. (2010) Dali server: conservation mapping in 3D. Nucleic Acids Res. 38, W545-W549
    • (2010) Nucleic Acids Res. , vol.38
    • Holm, L.1    Rosenström, P.2
  • 16
    • 57449099865 scopus 로고    scopus 로고
    • MaxQuant enables high peptide identification rates, individualized p.P.B.-range mass accuracies and proteome-wide protein quantification
    • Cox, J., and Mann, M. (2008) MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification. Nat. Biotechnol. 26, 1367-1372
    • (2008) Nat. Biotechnol. , vol.26 , pp. 1367-1372
    • Cox, J.1    Mann, M.2
  • 18
    • 78649833943 scopus 로고    scopus 로고
    • Efficient subfractionation of Gram-negative bacteria for proteomics studies
    • Thein, M., Sauer, G., Paramasivam, N., Grin, I., and Linke, D. (2010) Efficient subfractionation of Gram-negative bacteria for proteomics studies. J. Proteome Res. 9, 6135-6147
    • (2010) J. Proteome Res. , vol.9 , pp. 6135-6147
    • Thein, M.1    Sauer, G.2    Paramasivam, N.3    Grin, I.4    Linke, D.5
  • 20
    • 34447517753 scopus 로고    scopus 로고
    • Rapid engineering of bacterial reporter gene fusions by using red recombination
    • DOI 10.1128/AEM.00509-07
    • Gerlach, R. G., Hölzer, S. U., Jäckel, D., and Hensel, M. (2007) Rapid engineering of bacterial reporter gene fusions by using Red recombination. Appl. Environ. Microbiol. 73, 4234-4242 (Pubitemid 47068163)
    • (2007) Applied and Environmental Microbiology , vol.73 , Issue.13 , pp. 4234-4242
    • Gerlach, R.G.1    Holzer, S.U.2    Jackel, D.3    Hensel, M.4
  • 21
    • 15544371478 scopus 로고    scopus 로고
    • Rapid method for the construction of Salmonella enterica serovar typhimurium vaccine carrier strains
    • DOI 10.1128/IAI.73.3.1598-1605.2005
    • Husseiny, M. I., and Hensel, M. (2005) Rapid method for the construction of Salmonella enterica serovar Typhimurium vaccine carrier strains. Infect. Immun. 73, 1598-1605 (Pubitemid 40470747)
    • (2005) Infection and Immunity , vol.73 , Issue.3 , pp. 1598-1605
    • Husseiny, M.I.1    Hensel, M.2
  • 22
    • 0027879008 scopus 로고
    • Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants
    • Kabsch, W. (1993) Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants. J. Appl. Crystallogr. 26, 795-800
    • (1993) J. Appl. Crystallogr. , vol.26 , pp. 795-800
    • Kabsch, W.1
  • 23
    • 37549039510 scopus 로고    scopus 로고
    • A short history of SHELX
    • Sheldrick, G. M. (2008) A short history of SHELX. Acta Crystallogr. A 64, 112-122
    • (2008) Acta Crystallogr. A , vol.64 , pp. 112-122
    • Sheldrick, G.M.1
  • 24
    • 33748337934 scopus 로고    scopus 로고
    • The Buccaneer software for automated model building. 1. Tracing protein chains
    • Cowtan, K. (2006) The Buccaneer software for automated model building. 1. Tracing protein chains. Acta Crystallogr. D Biol. Crystallogr. 62, 1002-1011
    • (2006) Acta Crystallogr. D Biol. Crystallogr. , vol.62 , pp. 1002-1011
    • Cowtan, K.1
  • 27
    • 0000243829 scopus 로고
    • PROCHECK: A program to check the stereochemical quality of protein structures
    • Laskowski, R. A., MacArthur, M. W., Moss, D. S., and Thornton, J. M. (1993) PROCHECK: a program to check the stereochemical quality of protein structures. J. Appl. Crystallogr. 26, 283-291
    • (1993) J. Appl. Crystallogr. , vol.26 , pp. 283-291
    • Laskowski, R.A.1    MacArthur, M.W.2    Moss, D.S.3    Thornton, J.M.4
  • 28
    • 13444307044 scopus 로고    scopus 로고
    • Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions
    • DOI 10.1107/S0907444904026460
    • Krissinel, E., and Henrick, K. (2004) Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions. Acta Crystallogr. D Biol. Crystallogr. 60, 2256-2268 (Pubitemid 41742778)
    • (2004) Acta Crystallographica Section D: Biological Crystallography , vol.60 , Issue.12 I , pp. 2256-2268
    • Krissinel, E.1    Henrick, K.2
  • 29
    • 23144452044 scopus 로고    scopus 로고
    • The HHpred interactive server for protein homology detection and structure prediction
    • DOI 10.1093/nar/gki408
    • Söding, J., Biegert, A., and Lupas, A. N. (2005) The HHpred interactive server for protein homology detection and structure prediction. Nucleic Acids Res. 33, W244-W248 (Pubitemid 44529917)
    • (2005) Nucleic Acids Research , vol.33 , Issue.WEB. SERV. ISS.
    • Soding, J.1    Biegert, A.2    Lupas, A.N.3
  • 30
    • 52449085554 scopus 로고    scopus 로고
    • Methods for the bioinformatic identification of bacterial lipoproteins encoded in the genomes of Gram-positive bacteria
    • Rahman, O., Cummings, S. P., Harrington, D. J., and Sutcliffe, I. C. (2008) Methods for the bioinformatic identification of bacterial lipoproteins encoded in the genomes of Gram-positive bacteria. World J. Microbiol. & Biotechnol. 24, 2377-2382
    • (2008) World J. Microbiol. & Biotechnol. , vol.24 , pp. 2377-2382
    • Rahman, O.1    Cummings, S.P.2    Harrington, D.J.3    Sutcliffe, I.C.4
  • 31
    • 84865304759 scopus 로고    scopus 로고
    • ClubSub-P: Cluster-based subcellular localization prediction for Gram-negative bacteria and archaea
    • Paramasivam, N., and Linke, D. (2011) ClubSub-P: cluster-based subcellular localization prediction for Gram-negative bacteria and archaea. Front. Microbiol. 2, 218
    • (2011) Front. Microbiol. , vol.2 , pp. 218
    • Paramasivam, N.1    Linke, D.2
  • 34
    • 0032509096 scopus 로고    scopus 로고
    • Crystal structure of GCN4-pI(Q)I, a trimeric coiled coil with buried polar residues
    • DOI 10.1006/jmbi.1998.2214
    • Eckert, D. M., Malashkevich, V. N., and Kim, P. S. (1998) Crystal structure of GCN4-pIQI, a trimeric coiled coil with buried polar residues. J. Mol. Biol. 284, 859-865 (Pubitemid 28558539)
    • (1998) Journal of Molecular Biology , vol.284 , Issue.4 , pp. 859-865
    • Eckert, D.M.1    Malashkevich, V.N.2    Kim, P.S.3
  • 37
    • 65349149089 scopus 로고    scopus 로고
    • Molecular mechanism and function of CD40/CD40L engagement in the immune system
    • Elgueta, R., Benson, M. J., de Vries, V. C., Wasiuk, A., Guo, Y., and Noelle, R. J. (2009) Molecular mechanism and function of CD40/CD40L engagement in the immune system. Immunol. Rev. 229, 152-172
    • (2009) Immunol. Rev. , vol.229 , pp. 152-172
    • Elgueta, R.1    Benson, M.J.2    De Vries, V.C.3    Wasiuk, A.4    Guo, Y.5    Noelle, R.J.6
  • 39
    • 69249124625 scopus 로고    scopus 로고
    • Architecture, function and prediction of long signal peptides
    • Hiss, J. A., and Schneider, G. (2009) Architecture, function and prediction of long signal peptides. Brief. Bioinformatics 10, 569-578
    • (2009) Brief. Bioinformatics , vol.10 , pp. 569-578
    • Hiss, J.A.1    Schneider, G.2


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