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Volumn 8, Issue 2, 2014, Pages

Genome-Wide Tissue-Specific Gene Expression, Co-expression and Regulation of Co-expressed Genes in Adult Nematode Ascaris suum

Author keywords

[No Author keywords available]

Indexed keywords

ACETYLCHOLINE; SMAD PROTEIN; TRANSCRIPTION FACTOR SOX; TRANSCRIPTION FACTOR SOX1; TRANSCRIPTION FACTOR SOX14; TRANSCRIPTION FACTOR SOX17; TRANSCRIPTION FACTOR SOX2; TRANSCRIPTION FACTOR SOX21; TRANSCRIPTION FACTOR SOX3; UNCLASSIFIED DRUG;

EID: 84895741737     PISSN: 19352727     EISSN: 19352735     Source Type: Journal    
DOI: 10.1371/journal.pntd.0002678     Document Type: Article
Times cited : (42)

References (94)
  • 1
    • 67650895858 scopus 로고    scopus 로고
    • Global Prediction of Tissue-Specific Gene Expression and Context-Dependent Gene Networks in Caenorhabditis elegans
    • Chikina MD, Huttenhower C, Murphy CT, Troyanskaya OG, (2009) Global Prediction of Tissue-Specific Gene Expression and Context-Dependent Gene Networks in Caenorhabditis elegans. PLoS computational biology 5: e1000417.
    • (2009) PLoS Computational Biology , vol.5
    • Chikina, M.D.1    Huttenhower, C.2    Murphy, C.T.3    Troyanskaya, O.G.4
  • 2
    • 38549180634 scopus 로고    scopus 로고
    • Nematode genome evolution
    • Coghlan A, (2005) Nematode genome evolution. WormBook pp. 1-15.
    • (2005) WormBook , pp. 1-15
    • Coghlan, A.1
  • 3
    • 0034878923 scopus 로고    scopus 로고
    • Biodiversity in helminths and nematodes as a field of study: an overview
    • Hugot J-P, Baujard P, Morand S, (2001) Biodiversity in helminths and nematodes as a field of study: an overview. Nematology pp. 199-208.
    • (2001) Nematology , pp. 199-208
    • Hugot, J.-P.1    Baujard, P.2    Morand, S.3
  • 4
    • 0242658695 scopus 로고    scopus 로고
    • Parasitic nematode interactions with mammals and plants
    • Jasmer DP, Goverse A, Smant G, (2003) Parasitic nematode interactions with mammals and plants. Annu Rev Phytopathol 41: 245-270.
    • (2003) Annu Rev Phytopathol , vol.41 , pp. 245-270
    • Jasmer, D.P.1    Goverse, A.2    Smant, G.3
  • 5
    • 33744486308 scopus 로고    scopus 로고
    • Incorporating a Rapid-Impact Package for Neglected Tropical Diseases with Programs for HIV/AIDS, Tuberculosis, and Malaria
    • Hotez PJ, Molyneux DH, Fenwick A, Ottesen E, Ehrlich Sachs S, et al. (2006) Incorporating a Rapid-Impact Package for Neglected Tropical Diseases with Programs for HIV/AIDS, Tuberculosis, and Malaria. PLoS Med 3: e102.
    • (2006) PLoS Med , vol.3
    • Hotez, P.J.1    Molyneux, D.H.2    Fenwick, A.3    Ottesen, E.4    Ehrlich Sachs, S.5
  • 7
    • 84862223905 scopus 로고    scopus 로고
    • Nematode.net update 2011: addition of data sets and tools featuring next-generation sequencing data
    • Martin J, Abubucker S, Heizer E, Taylor C, Mitreva M, (2012) Nematode.net update 2011: addition of data sets and tools featuring next-generation sequencing data. Nucleic acids research 40: D720-D728.
    • (2012) Nucleic Acids Research , vol.40
    • Martin, J.1    Abubucker, S.2    Heizer, E.3    Taylor, C.4    Mitreva, M.5
  • 9
    • 84860800529 scopus 로고    scopus 로고
    • Transcription profiling reveals stage- and function-dependent expression patterns in the filarial nematode Brugia malayi
    • Li B-W, Wang Z, Rush A, Mitreva M, Weil G, (2012) Transcription profiling reveals stage- and function-dependent expression patterns in the filarial nematode Brugia malayi. BMC Genomics 13: 184.
    • (2012) BMC Genomics , vol.13 , pp. 184
    • Li, B.-W.1    Wang, Z.2    Rush, A.3    Mitreva, M.4    Weil, G.5
  • 10
    • 10744220169 scopus 로고    scopus 로고
    • Comparative genomics of gene expression in the parasitic and free-living nematodes Strongyloides stercoralis and Caenorhabditis elegans
    • Mitreva M, McCarter JP, Martin J, Dante M, Wylie T, et al. (2004) Comparative genomics of gene expression in the parasitic and free-living nematodes Strongyloides stercoralis and Caenorhabditis elegans. Genome Res 14: 209-220.
    • (2004) Genome Res , vol.14 , pp. 209-220
    • Mitreva, M.1    McCarter, J.P.2    Martin, J.3    Dante, M.4    Wylie, T.5
  • 11
    • 84869078220 scopus 로고    scopus 로고
    • RNAseq Analysis of the Parasitic Nematode Strongyloides stercoralis Reveals Divergent Regulation of Canonical Dauer Pathways
    • Stoltzfus JD, Minot S, Berriman M, Nolan TJ, Lok JB, (2012) RNAseq Analysis of the Parasitic Nematode Strongyloides stercoralis Reveals Divergent Regulation of Canonical Dauer Pathways. PLoS Negl Trop Dis 6: e1854.
    • (2012) PLoS Negl Trop Dis , vol.6
    • Stoltzfus, J.D.1    Minot, S.2    Berriman, M.3    Nolan, T.J.4    Lok, J.B.5
  • 12
    • 0035935627 scopus 로고    scopus 로고
    • Caenorhabditis elegans: how good a model for veterinary parasites?
    • Geary TG, Thompson DP, (2001) Caenorhabditis elegans: how good a model for veterinary parasites? Vet Parasitol 101: 371-386.
    • (2001) Vet Parasitol , vol.101 , pp. 371-386
    • Geary, T.G.1    Thompson, D.P.2
  • 14
  • 15
    • 56149121546 scopus 로고    scopus 로고
    • Intestinal transcriptomes of nematodes: comparison of the parasites Ascaris suum and Haemonchus contortus with the free-living Caenorhabditis elegans
    • Yin Y, Martin J, Abubucker S, Scott AL, McCarter JP, et al. (2008) Intestinal transcriptomes of nematodes: comparison of the parasites Ascaris suum and Haemonchus contortus with the free-living Caenorhabditis elegans. PLoS Negl Trop Dis 2: e269.
    • (2008) PLoS Negl Trop Dis , vol.2
    • Yin, Y.1    Martin, J.2    Abubucker, S.3    Scott, A.L.4    McCarter, J.P.5
  • 16
    • 85015490106 scopus 로고    scopus 로고
    • Gene expression analysis distinguishes tissue-specific and gender-related functions among adult Ascaris suum tissues
    • Wang Z, Gao X, Martin J, Yin Y, Abubucker S, et al. (2013) Gene expression analysis distinguishes tissue-specific and gender-related functions among adult Ascaris suum tissues. Mol Genet Genomics 10: 10.
    • (2013) Mol Genet Genomics , vol.10 , pp. 10
    • Wang, Z.1    Gao, X.2    Martin, J.3    Yin, Y.4    Abubucker, S.5
  • 19
    • 65449136284 scopus 로고    scopus 로고
    • TopHat: discovering splice junctions with RNA-Seq
    • Trapnell C, Pachter L, Salzberg SL, (2009) TopHat: discovering splice junctions with RNA-Seq. Bioinformatics 25: 1105-1111.
    • (2009) Bioinformatics , vol.25 , pp. 1105-1111
    • Trapnell, C.1    Pachter, L.2    Salzberg, S.L.3
  • 20
    • 63849342015 scopus 로고    scopus 로고
    • Massively parallel sequencing of the polyadenylated transcriptome of C. elegans
    • Hillier LW, Reinke V, Green P, Hirst M, Marra MA, et al. (2009) Massively parallel sequencing of the polyadenylated transcriptome of C. elegans. Genome research 19: 657-666.
    • (2009) Genome Research , vol.19 , pp. 657-666
    • Hillier, L.W.1    Reinke, V.2    Green, P.3    Hirst, M.4    Marra, M.A.5
  • 21
    • 84866634299 scopus 로고    scopus 로고
    • Finding consistent patterns: A nonparametric approach for identifying differential expression in RNA-Seq data
    • Li J, Tibshirani R, (2011) Finding consistent patterns: A nonparametric approach for identifying differential expression in RNA-Seq data. Stat Methods Med Res 28: 28.
    • (2011) Stat Methods Med Res , vol.28 , pp. 28
    • Li, J.1    Tibshirani, R.2
  • 22
    • 84882692468 scopus 로고    scopus 로고
    • Large Scale Comparison of Gene Expression Levels by Microarrays and RNAseq Using TCGA Data
    • Guo Y, Sheng Q, Li J, Ye F, Samuels DC, et al. (2013) Large Scale Comparison of Gene Expression Levels by Microarrays and RNAseq Using TCGA Data. PLoS One 8: e71462.
    • (2013) PLoS One , vol.8
    • Guo, Y.1    Sheng, Q.2    Li, J.3    Ye, F.4    Samuels, D.C.5
  • 23
    • 84887156607 scopus 로고    scopus 로고
    • Parallel comparison of Illumina RNA-Seq and Affymetrix microarray platforms on transcriptomic profiles generated from 5-aza-deoxy-cytidine treated HT-29 colon cancer cells and simulated datasets
    • Xu X, Zhang Y, Williams J, Antoniou E, McCombie WR, et al. (2013) Parallel comparison of Illumina RNA-Seq and Affymetrix microarray platforms on transcriptomic profiles generated from 5-aza-deoxy-cytidine treated HT-29 colon cancer cells and simulated datasets. BMC bioinformatics 14: 1471-2105.
    • (2013) BMC Bioinformatics , vol.14 , pp. 1471-2105
    • Xu, X.1    Zhang, Y.2    Williams, J.3    Antoniou, E.4    McCombie, W.R.5
  • 24
    • 84874677498 scopus 로고    scopus 로고
    • A comparison of methods for differential expression analysis of RNA-seq data
    • Soneson C, Delorenzi M, (2013) A comparison of methods for differential expression analysis of RNA-seq data. BMC bioinformatics 14: 91.
    • (2013) BMC Bioinformatics , vol.14 , pp. 91
    • Soneson, C.1    Delorenzi, M.2
  • 25
    • 84883420810 scopus 로고    scopus 로고
    • In-Depth Characterization of microRNA Transcriptome in Melanoma
    • Kozubek J, Ma Z, Fleming E, Duggan T, Wu R, et al. (2013) In-Depth Characterization of microRNA Transcriptome in Melanoma. PLoS One 8: e72699.
    • (2013) PLoS One , vol.8
    • Kozubek, J.1    Ma, Z.2    Fleming, E.3    Duggan, T.4    Wu, R.5
  • 26
    • 84880748598 scopus 로고    scopus 로고
    • A mammalian pseudogene lncRNA at the interface of inflammation and anti-inflammatory therapeutics
    • Rapicavoli NA, Qu K, Zhang J, Mikhail M, Laberge RM, et al. (2013) A mammalian pseudogene lncRNA at the interface of inflammation and anti-inflammatory therapeutics. Elife 2: e00762.
    • (2013) Elife , vol.2
    • Rapicavoli, N.A.1    Qu, K.2    Zhang, J.3    Mikhail, M.4    Laberge, R.M.5
  • 27
    • 84872801486 scopus 로고    scopus 로고
    • Identification and functional annotation of genome-wide ER-regulated genes in breast cancer based on ChIP-Seq data
    • 568950
    • Ding M, Wang H, Chen J, Shen B, Xu Z, (2012) Identification and functional annotation of genome-wide ER-regulated genes in breast cancer based on ChIP-Seq data. Comput Math Methods Med 568950: 31.
    • (2012) Comput Math Methods Med , pp. 31
    • Ding, M.1    Wang, H.2    Chen, J.3    Shen, B.4    Xu, Z.5
  • 28
    • 77955102632 scopus 로고    scopus 로고
    • Transcriptome and targetome analysis in MIR155 expressing cells using RNA-seq
    • Xu G, Fewell C, Taylor C, Deng N, Hedges D, et al. (2010) Transcriptome and targetome analysis in MIR155 expressing cells using RNA-seq. Rna 16: 1610-1622.
    • (2010) Rna , vol.16 , pp. 1610-1622
    • Xu, G.1    Fewell, C.2    Taylor, C.3    Deng, N.4    Hedges, D.5
  • 29
    • 0034800374 scopus 로고    scopus 로고
    • InterProScan-an integration platform for the signature-recognition methods in InterPro
    • Zdobnov EM, Apweiler R, (2001) InterProScan-an integration platform for the signature-recognition methods in InterPro. Bioinformatics 17: 847-848.
    • (2001) Bioinformatics , vol.17 , pp. 847-848
    • Zdobnov, E.M.1    Apweiler, R.2
  • 31
    • 0034069495 scopus 로고    scopus 로고
    • Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
    • Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, et al. (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 25: 25-29.
    • (2000) Nat Genet , vol.25 , pp. 25-29
    • Ashburner, M.1    Ball, C.A.2    Blake, J.A.3    Botstein, D.4    Butler, H.5
  • 34
    • 2142657817 scopus 로고    scopus 로고
    • A combined transmembrane topology and signal peptide prediction method
    • Kall L, Krogh A, Sonnhammer EL, (2004) A combined transmembrane topology and signal peptide prediction method. Journal of molecular biology 338: 1027-1036.
    • (2004) Journal of Molecular Biology , vol.338 , pp. 1027-1036
    • Kall, L.1    Krogh, A.2    Sonnhammer, E.L.3
  • 36
    • 33847173733 scopus 로고    scopus 로고
    • FUNC: a package for detecting significant associations between gene sets and ontological annotations
    • Prufer K, Muetzel B, Do H, Weiss G, Khaitovich P, et al. (2007) FUNC: a package for detecting significant associations between gene sets and ontological annotations. BMC bioinformatics 8: 41.
    • (2007) BMC Bioinformatics , vol.8 , pp. 41
    • Prufer, K.1    Muetzel, B.2    Do, H.3    Weiss, G.4    Khaitovich, P.5
  • 38
    • 79958090979 scopus 로고    scopus 로고
    • DREME: motif discovery in transcription factor ChIP-seq data
    • Bailey TL, (2011) DREME: motif discovery in transcription factor ChIP-seq data. Bioinformatics 27: 1653-1659.
    • (2011) Bioinformatics , vol.27 , pp. 1653-1659
    • Bailey, T.L.1
  • 39
    • 79953300078 scopus 로고    scopus 로고
    • FIMO: scanning for occurrences of a given motif
    • Grant CE, Bailey TL, Noble WS, (2011) FIMO: scanning for occurrences of a given motif. Bioinformatics 27: 1017-1018.
    • (2011) Bioinformatics , vol.27 , pp. 1017-1018
    • Grant, C.E.1    Bailey, T.L.2    Noble, W.S.3
  • 41
    • 38549096565 scopus 로고    scopus 로고
    • JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update
    • Bryne JC, Valen E, Tang MH, Marstrand T, Winther O, et al. (2008) JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update. Nucleic acids research 36: 15.
    • (2008) Nucleic Acids Research , vol.36 , pp. 15
    • Bryne, J.C.1    Valen, E.2    Tang, M.H.3    Marstrand, T.4    Winther, O.5
  • 42
    • 58149200952 scopus 로고    scopus 로고
    • UniPROBE: an online database of protein binding microarray data on protein-DNA interactions
    • Newburger DE, Bulyk ML, (2009) UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37: 8.
    • (2009) Nucleic Acids Research , vol.37 , pp. 8
    • Newburger, D.E.1    Bulyk, M.L.2
  • 44
    • 0014828088 scopus 로고
    • Abbreviations and Symbols for Nucleic Acids, Polynucleotides and their Constituents
    • IUPAC-IUB
    • IUPAC-IUB (1970) Abbreviations and Symbols for Nucleic Acids, Polynucleotides and their Constituents. European Journal of Biochemistry 15: 203-208.
    • (1970) European Journal of Biochemistry , vol.15 , pp. 203-208
  • 45
    • 79551587720 scopus 로고    scopus 로고
    • Cytoscape 2.8: new features for data integration and network visualization
    • Smoot ME, Ono K, Ruscheinski J, Wang PL, Ideker T, (2011) Cytoscape 2.8: new features for data integration and network visualization. Bioinformatics 27: 431-432.
    • (2011) Bioinformatics , vol.27 , pp. 431-432
    • Smoot, M.E.1    Ono, K.2    Ruscheinski, J.3    Wang, P.L.4    Ideker, T.5
  • 46
    • 71749094192 scopus 로고    scopus 로고
    • Arabidopsis gene co-expression network and its functional modules
    • Mao L, Van Hemert J, Dash S, Dickerson J, (2009) Arabidopsis gene co-expression network and its functional modules. BMC bioinformatics 10: 346.
    • (2009) BMC Bioinformatics , vol.10 , pp. 346
    • Mao, L.1    Van Hemert, J.2    Dash, S.3    Dickerson, J.4
  • 48
    • 2942511454 scopus 로고    scopus 로고
    • VKCDB: voltage-gated potassium channel database
    • Li B, Gallin WJ, (2004) VKCDB: voltage-gated potassium channel database. BMC bioinformatics 5: 3.
    • (2004) BMC Bioinformatics , vol.5 , pp. 3
    • Li, B.1    Gallin, W.J.2
  • 49
    • 67649235126 scopus 로고    scopus 로고
    • Serum arylesterase activity is negatively correlated with inflammatory markers in patients with acute coronary syndromes
    • Senturk T, Sarandol E, Gullulu S, Erdinc S, Ozdabakoglu O, et al. (2009) Serum arylesterase activity is negatively correlated with inflammatory markers in patients with acute coronary syndromes. Saudi Med J 30: 334-339.
    • (2009) Saudi Med J , vol.30 , pp. 334-339
    • Senturk, T.1    Sarandol, E.2    Gullulu, S.3    Erdinc, S.4    Ozdabakoglu, O.5
  • 52
    • 84895766736 scopus 로고    scopus 로고
    • The C. elegans pharynx: A model for organogenesis
    • editor. WormBook
    • Mango SE (2007) The C. elegans pharynx: a model for organogenesis. In: Community TCeR, editor. WormBook.
    • (2007) Community TCeR
    • Mango, S.E.1
  • 53
    • 0033387285 scopus 로고    scopus 로고
    • Actions of Nematode FMRFamide-related Peptides on the Pharyngeal Muscle of the Parasitic Nematode, Ascaris suum
    • Brownlee DJA, Walker RJ, (1999) Actions of Nematode FMRFamide-related Peptides on the Pharyngeal Muscle of the Parasitic Nematode, Ascaris suum. Annals of the New York Academy of Sciences 897: 228-238.
    • (1999) Annals of the New York Academy of Sciences , vol.897 , pp. 228-238
    • Brownlee, D.J.A.1    Walker, R.J.2
  • 54
    • 0037312504 scopus 로고    scopus 로고
    • Hookworm aspartic protease, Na-APR-2, cleaves human hemoglobin and serum proteins in a host-specific fashion
    • Williamson AL, Brindley PJ, Abbenante G, Datu BJ, Prociv P, et al. (2003) Hookworm aspartic protease, Na-APR-2, cleaves human hemoglobin and serum proteins in a host-specific fashion. J Infect Dis 187: 484-494.
    • (2003) J Infect Dis , vol.187 , pp. 484-494
    • Williamson, A.L.1    Brindley, P.J.2    Abbenante, G.3    Datu, B.J.4    Prociv, P.5
  • 55
    • 33846057724 scopus 로고    scopus 로고
    • NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins
    • Pruitt KD, Tatusova T, Maglott DR, (2007) NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins. Nucleic acids research 35: 27.
    • (2007) Nucleic Acids Research , vol.35 , pp. 27
    • Pruitt, K.D.1    Tatusova, T.2    Maglott, D.R.3
  • 56
    • 56149121546 scopus 로고    scopus 로고
    • Intestinal transcriptomes of nematodes: comparison of the parasites Ascaris suum and Haemonchus contortus with the free-living Caenorhabditis elegans
    • Yin Y, Martin J, Abubucker S, Scott AL, McCarter JP, et al. (2008) Intestinal transcriptomes of nematodes: comparison of the parasites Ascaris suum and Haemonchus contortus with the free-living Caenorhabditis elegans. PLoS Negl Trop Dis 2: 0000269.
    • (2008) PLoS Negl Trop Dis , vol.2 , pp. 0000269
    • Yin, Y.1    Martin, J.2    Abubucker, S.3    Scott, A.L.4    McCarter, J.P.5
  • 57
    • 3342976387 scopus 로고    scopus 로고
    • MSP domain proteins show enhanced expression in male germ line cells
    • Tarr DEK, Scott AL, (2004) MSP domain proteins show enhanced expression in male germ line cells. Molecular and Biochemical Parasitology 137: 87-98.
    • (2004) Molecular and Biochemical Parasitology , vol.137 , pp. 87-98
    • Tarr, D.E.K.1    Scott, A.L.2
  • 58
    • 84869090330 scopus 로고    scopus 로고
    • Silencing of Germline-Expressed Genes by DNA Elimination in Somatic Cells
    • Wang J, Mitreva M, Berriman M, Thorne A, Magrini V, et al. (2012) Silencing of Germline-Expressed Genes by DNA Elimination in Somatic Cells. Developmental Cell 23: 1072-1080.
    • (2012) Developmental Cell , vol.23 , pp. 1072-1080
    • Wang, J.1    Mitreva, M.2    Berriman, M.3    Thorne, A.4    Magrini, V.5
  • 59
    • 84863115230 scopus 로고    scopus 로고
    • Nematode sperm maturation triggered by protease involves sperm-secreted serine protease inhibitor (Serpin)
    • Zhao Y, Sun W, Zhang P, Chi H, Zhang MJ, et al. (2012) Nematode sperm maturation triggered by protease involves sperm-secreted serine protease inhibitor (Serpin). Proc Natl Acad Sci U S A 109: 1542-1547.
    • (2012) Proc Natl Acad Sci U S A , vol.109 , pp. 1542-1547
    • Zhao, Y.1    Sun, W.2    Zhang, P.3    Chi, H.4    Zhang, M.J.5
  • 60
    • 0037137443 scopus 로고    scopus 로고
    • Gene Clustering Based on RNAi Phenotypes of Ovary-Enriched Genes in C. elegans
    • Piano F, Schetter AJ, Morton DG, Gunsalus KC, Reinke V, et al. (2002) Gene Clustering Based on RNAi Phenotypes of Ovary-Enriched Genes in C. elegans. Current Biology 12: 1959-1964.
    • (2002) Current Biology , vol.12 , pp. 1959-1964
    • Piano, F.1    Schetter, A.J.2    Morton, D.G.3    Gunsalus, K.C.4    Reinke, V.5
  • 62
    • 20244369068 scopus 로고    scopus 로고
    • New genes with roles in the C. elegans embryo revealed using RNAi of ovary-enriched ORFeome clones
    • Fernandez AG, Gunsalus KC, Huang J, Chuang L-S, Ying N, et al. (2005) New genes with roles in the C. elegans embryo revealed using RNAi of ovary-enriched ORFeome clones. Genome research 15: 250-259.
    • (2005) Genome Research , vol.15 , pp. 250-259
    • Fernandez, A.G.1    Gunsalus, K.C.2    Huang, J.3    Chuang, L.-S.4    Ying, N.5
  • 63
    • 34249982937 scopus 로고    scopus 로고
    • Role of phosphatidylinositol-4-phosphate 5′ kinase (ppk-1) in ovulation of Caenorhabditis elegans
    • Xu X, Guo H, Wycuff DL, Lee M, (2007) Role of phosphatidylinositol-4-phosphate 5′ kinase (ppk-1) in ovulation of Caenorhabditis elegans. Exp Cell Res 313: 2465-2475.
    • (2007) Exp Cell Res , vol.313 , pp. 2465-2475
    • Xu, X.1    Guo, H.2    Wycuff, D.L.3    Lee, M.4
  • 65
    • 81755163132 scopus 로고    scopus 로고
    • For Male Caenorhabditis elegans, Sperm Activation Is a "Just-in-Time" Event
    • Shakes DC, (2011) For Male Caenorhabditis elegans, Sperm Activation Is a "Just-in-Time" Event. PLoS Genet 7: e1002392.
    • (2011) PLoS Genet , vol.7
    • Shakes, D.C.1
  • 66
    • 0034599633 scopus 로고    scopus 로고
    • Acting like actin. The dynamics of the nematode major sperm protein (msp) cytoskeleton indicate a push-pull mechanism for amoeboid cell motility
    • Roberts TM, Stewart M, (2000) Acting like actin. The dynamics of the nematode major sperm protein (msp) cytoskeleton indicate a push-pull mechanism for amoeboid cell motility. J Cell Biol 149: 7-12.
    • (2000) J Cell Biol , vol.149 , pp. 7-12
    • Roberts, T.M.1    Stewart, M.2
  • 69
    • 0026438406 scopus 로고
    • Morphology of the uterus of Ascaris lumbricoides in the region where fertilization and formation of egg-shell occur
    • Lysek H, Ondrus J, (1992) Morphology of the uterus of Ascaris lumbricoides in the region where fertilization and formation of egg-shell occur. Folia Parasitol 39: 41-50.
    • (1992) Folia Parasitol , vol.39 , pp. 41-50
    • Lysek, H.1    Ondrus, J.2
  • 70
    • 0029855583 scopus 로고    scopus 로고
    • Morphogenesis of the C. elegans hermaphrodite uterus
    • Newman AP, White JG, Sternberg PW, (1996) Morphogenesis of the C. elegans hermaphrodite uterus. Development 122: 3617-3626.
    • (1996) Development , vol.122 , pp. 3617-3626
    • Newman, A.P.1    White, J.G.2    Sternberg, P.W.3
  • 71
    • 0033545660 scopus 로고    scopus 로고
    • Reciprocal EGF signaling back to the uterus from the induced C. elegans vulva coordinates morphogenesis of epithelia
    • Chang C, Newman AP, Sternberg PW, (1999) Reciprocal EGF signaling back to the uterus from the induced C. elegans vulva coordinates morphogenesis of epithelia. Current biology: CB 9: 237-246.
    • (1999) Current Biology: CB , vol.9 , pp. 237-246
    • Chang, C.1    Newman, A.P.2    Sternberg, P.W.3
  • 73
    • 0033747384 scopus 로고    scopus 로고
    • Mab-3 is a direct tra-1 target gene regulating diverse aspects of C. elegans male sexual development and behavior
    • Yi W, Ross JM, Zarkower D, (2000) Mab-3 is a direct tra-1 target gene regulating diverse aspects of C. elegans male sexual development and behavior. Development 127: 4469-4480.
    • (2000) Development , vol.127 , pp. 4469-4480
    • Yi, W.1    Ross, J.M.2    Zarkower, D.3
  • 74
    • 60549094760 scopus 로고    scopus 로고
    • ELT-2 is the predominant transcription factor controlling differentiation and function of the C. elegans intestine, from embryo to adult
    • McGhee JD, Fukushige T, Krause MW, Minnema SE, Goszczynski B, et al. (2009) ELT-2 is the predominant transcription factor controlling differentiation and function of the C. elegans intestine, from embryo to adult. Dev Biol 327: 551-565.
    • (2009) Dev Biol , vol.327 , pp. 551-565
    • McGhee, J.D.1    Fukushige, T.2    Krause, M.W.3    Minnema, S.E.4    Goszczynski, B.5
  • 76
    • 0028106198 scopus 로고
    • Targeted mutations in the Caenorhabditis elegans POU homeo box gene ceh-18 cause defects in oocyte cell cycle arrest, gonad migration, and epidermal differentiation
    • Greenstein D, Hird S, Plasterk RH, Andachi Y, Kohara Y, et al. (1994) Targeted mutations in the Caenorhabditis elegans POU homeo box gene ceh-18 cause defects in oocyte cell cycle arrest, gonad migration, and epidermal differentiation. Genes & Development 8: 1935-1948.
    • (1994) Genes & Development , vol.8 , pp. 1935-1948
    • Greenstein, D.1    Hird, S.2    Plasterk, R.H.3    Andachi, Y.4    Kohara, Y.5
  • 77
    • 33748486517 scopus 로고    scopus 로고
    • AceView: a comprehensive cDNA-supported gene and transcripts annotation
    • Thierry-Mieg D, Thierry-Mieg J, (2006) AceView: a comprehensive cDNA-supported gene and transcripts annotation. Genome Biol 7: 1-14.
    • (2006) Genome Biol , vol.7 , pp. 1-14
    • Thierry-Mieg, D.1    Thierry-Mieg, J.2
  • 78
    • 79953758068 scopus 로고    scopus 로고
    • A Bow-Tie Genetic Architecture for Morphogenesis Suggested by a Genome-Wide RNAi Screen in Caenorhabditis elegans
    • Nelson MD, Zhou E, Kiontke K, Fradin H, Maldonado G, et al. (2011) A Bow-Tie Genetic Architecture for Morphogenesis Suggested by a Genome-Wide RNAi Screen in Caenorhabditis elegans. PLoS Genet 7: e1002010.
    • (2011) PLoS Genet , vol.7
    • Nelson, M.D.1    Zhou, E.2    Kiontke, K.3    Fradin, H.4    Maldonado, G.5
  • 80
    • 74349123142 scopus 로고    scopus 로고
    • Antagonistic Smad transcription factors control the dauer/non-dauer switch in C. elegans
    • Park D, Estevez A, Riddle DL, (2010) Antagonistic Smad transcription factors control the dauer/non-dauer switch in C. elegans. Development 137: 477-485.
    • (2010) Development , vol.137 , pp. 477-485
    • Park, D.1    Estevez, A.2    Riddle, D.L.3
  • 81
    • 0035931097 scopus 로고    scopus 로고
    • Further defining housekeeping, or "maintenance," genes Focus on A compendium of gene expression in normal human tissues
    • Butte AJ, Dzau VJ, Glueck SB, (2001) Further defining housekeeping, or "maintenance," genes Focus on "A compendium of gene expression in normal human tissues". Physiological Genomics 7: 95-96.
    • (2001) Physiological Genomics , vol.7 , pp. 95-96
    • Butte, A.J.1    Dzau, V.J.2    Glueck, S.B.3
  • 82
    • 84866065824 scopus 로고    scopus 로고
    • Weighted Frequent Gene Co-expression Network Mining to Identify Genes Involved in Genome Stability
    • Zhang J, Lu K, Xiang Y, Islam M, Kotian S, et al. (2012) Weighted Frequent Gene Co-expression Network Mining to Identify Genes Involved in Genome Stability. PLoS computational biology 8: e1002656.
    • (2012) PLoS Computational Biology , vol.8
    • Zhang, J.1    Lu, K.2    Xiang, Y.3    Islam, M.4    Kotian, S.5
  • 83
    • 67650865944 scopus 로고    scopus 로고
    • Multi-tissue coexpression networks reveal unexpected subnetworks associated with disease
    • Dobrin R, Zhu J, Molony C, Argman C, Parrish M, et al. (2009) Multi-tissue coexpression networks reveal unexpected subnetworks associated with disease. Genome Biology 10: R55.
    • (2009) Genome Biology , vol.10
    • Dobrin, R.1    Zhu, J.2    Molony, C.3    Argman, C.4    Parrish, M.5
  • 84
    • 79960657553 scopus 로고    scopus 로고
    • Gene Coexpression Network Analysis as a Source of Functional Annotation for Rice Genes
    • Childs KL, Davidson RM, Buell CR, (2011) Gene Coexpression Network Analysis as a Source of Functional Annotation for Rice Genes. PLoS One 6: e22196.
    • (2011) PLoS One , vol.6
    • Childs, K.L.1    Davidson, R.M.2    Buell, C.R.3
  • 85
    • 0000295505 scopus 로고
    • The physiological role of acetylcholine in the neuromuscular system of ascaris lumbricoides
    • Del Castillo J, De Mello WC, Morales D, (1963) The physiological role of acetylcholine in the neuromuscular system of ascaris lumbricoides. Archives of Physiology and Biochemistry 71: 741-757.
    • (1963) Archives of Physiology and Biochemistry , vol.71 , pp. 741-757
    • Del Castillo, J.1    De Mello, W.C.2    Morales, D.3
  • 86
    • 66349115612 scopus 로고    scopus 로고
    • Haemonchus contortus Acetylcholine Receptors of the DEG-3 Subfamily and Their Role in Sensitivity to Monepantel
    • Rufener L, Mäser P, Roditi I, Kaminsky R, (2009) Haemonchus contortus Acetylcholine Receptors of the DEG-3 Subfamily and Their Role in Sensitivity to Monepantel. PLoS Pathog 5: e1000380.
    • (2009) PLoS Pathog , vol.5
    • Rufener, L.1    Mäser, P.2    Roditi, I.3    Kaminsky, R.4
  • 87
    • 40749099893 scopus 로고    scopus 로고
    • A new class of anthelmintics effective against drug-resistant nematodes
    • Kaminsky R, Ducray P, Jung M, Clover R, Rufener L, et al. (2008) A new class of anthelmintics effective against drug-resistant nematodes. Nature 452: 176-180.
    • (2008) Nature , vol.452 , pp. 176-180
    • Kaminsky, R.1    Ducray, P.2    Jung, M.3    Clover, R.4    Rufener, L.5
  • 88
    • 48349144172 scopus 로고    scopus 로고
    • Identification of the amino-acetonitrile derivative monepantel (AAD 1566) as a new anthelmintic drug development candidate
    • Kaminsky R, Gauvry N, Schorderet Weber S, Skripsky T, Bouvier J, et al. (2008) Identification of the amino-acetonitrile derivative monepantel (AAD 1566) as a new anthelmintic drug development candidate. Parasitology research 103: 931-939.
    • (2008) Parasitology Research , vol.103 , pp. 931-939
    • Kaminsky, R.1    Gauvry, N.2    Schorderet Weber, S.3    Skripsky, T.4    Bouvier, J.5
  • 89
    • 84878768610 scopus 로고    scopus 로고
    • Molecular Characterization and Functions of Fatty Acid and Retinoid Binding Protein Gene (Ab-far-1) in Aphelenchoides besseyi
    • Cheng X, Xiang Y, Xie H, Xu C-L, Xie T-F, et al. (2013) Molecular Characterization and Functions of Fatty Acid and Retinoid Binding Protein Gene (Ab-far-1) in Aphelenchoides besseyi. PLoS One 8: e66011.
    • (2013) PLoS One , vol.8
    • Cheng, X.1    Xiang, Y.2    Xie, H.3    Xu, C.-L.4    Xie, T.-F.5
  • 90
  • 91
    • 0037242769 scopus 로고    scopus 로고
    • Ac-FAR-1, a 20 kDa fatty acid- and retinol-binding protein secreted by adult Ancylostoma caninum hookworms: gene transcription pattern, ligand binding properties and structural characterisation
    • Basavaraju SV, Zhan B, Kennedy MW, Liu Y, Hawdon J, et al. (2003) Ac-FAR-1, a 20 kDa fatty acid- and retinol-binding protein secreted by adult Ancylostoma caninum hookworms: gene transcription pattern, ligand binding properties and structural characterisation. Mol Biochem Parasitol 126: 63-71.
    • (2003) Mol Biochem Parasitol , vol.126 , pp. 63-71
    • Basavaraju, S.V.1    Zhan, B.2    Kennedy, M.W.3    Liu, Y.4    Hawdon, J.5
  • 92
    • 0035365837 scopus 로고    scopus 로고
    • A surface-associated retinol- and fatty acid-binding protein (Gp-FAR-1) from the potato cyst nematode Globodera pallida: lipid binding activities, structural analysis and expression pattern
    • Prior A, Jones JT, Blok VC, Beauchamp J, McDermott L, et al. (2001) A surface-associated retinol- and fatty acid-binding protein (Gp-FAR-1) from the potato cyst nematode Globodera pallida: lipid binding activities, structural analysis and expression pattern. Biochem J 356: 387-394.
    • (2001) Biochem J , vol.356 , pp. 387-394
    • Prior, A.1    Jones, J.T.2    Blok, V.C.3    Beauchamp, J.4    McDermott, L.5
  • 93
    • 0037242769 scopus 로고    scopus 로고
    • Ac-FAR-1, a 20 kDa fatty acid- and retinol-binding protein secreted by adult Ancylostoma caninum hookworms: gene transcription pattern, ligand binding properties and structural characterisation
    • Basavaraju SV, Zhan B, Kennedy MW, Liu Y, Hawdon J, et al. (2003) Ac-FAR-1, a 20 kDa fatty acid- and retinol-binding protein secreted by adult Ancylostoma caninum hookworms: gene transcription pattern, ligand binding properties and structural characterisation. Molecular and biochemical parasitology 126: 63-71.
    • (2003) Molecular and Biochemical Parasitology , vol.126 , pp. 63-71
    • Basavaraju, S.V.1    Zhan, B.2    Kennedy, M.W.3    Liu, Y.4    Hawdon, J.5


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