Understanding the antimicrobial mechanism of TiO 2 -based nanocomposite films in a pathogenic bacterium

Scientific Reports

Volumn 4, Issue , 2014, Pages

  Kubacka, Anna ^a   Diez, María Suárez ^b   Rojo, David ^c   Bargiela, Rafael ^a   Ciordia, Sergio ^d   Zapico, Inés ^d   Albar, Juan P ^d   Barbas, Coral ^c   Martins Dos Santos, Vitor A P ^b,e   Fernández García, Marcos ^a   Ferrer, Manuel ^a  

^a INSTITUTO DE CATÁLISIS Y PETROLEOQUÍMICA   (Spain)

^b WAGENINGEN UNIVERSITY   (Netherlands)

^c UNIVERSIDAD SAN PABLO CEU   (Spain)

^d CENTRO NACIONAL DE BIOTECNOLOGÍA   (Spain)

^e LIFEGLIMMER GMBH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIINFECTIVE AGENT; BACTERIAL PROTEIN; NANOCOMPOSITE; TITANIUM; TITANIUM DIOXIDE; TRANSCRIPTOME;

CATALYSIS; CHEMISTRY; DRUG EFFECTS; ELECTRON SPIN RESONANCE; METABOLISM; PROTEOMICS; PSEUDOMONAS AERUGINOSA; RADIATION RESPONSE; ULTRASTRUCTURE; ULTRAVIOLET RADIATION;

ANTI-INFECTIVE AGENTS; BACTERIAL PROTEINS; CATALYSIS; ELECTRON SPIN RESONANCE SPECTROSCOPY; NANOCOMPOSITES; PROTEOMICS; PSEUDOMONAS AERUGINOSA; TITANIUM; TRANSCRIPTOME; ULTRAVIOLET RAYS;

EID: 84894581758     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep04134     Document Type: Article

References (59)

1. Appendini, P. & Hotchkiss, J. H. Review of antimicrobial food packaging. Innov. Food Sci. Emerg. 3, 113-126 (2002). (Pubitemid 34650080)
2. Noimark, S., Dunnill, C. W. & Wilson, I. P. The role of surfaces in catheter-associated infections. Chem. Soc. Rev. 38, 3435-3448 (2009).
3. Rai, M., Yada, A. & Gade, V. A. Silver nanoparticles as a new generation of antimicrobials. Biotechnol Adv. 27, 76-83 (2009).
4. Dunlop, C. P. et al. Inactivation of clinically relevant pathogens by photocatalytic coatings. J. Photochem. Photobiol. A 216, 303 (2010).
5. Duncan, T. V.Applications of nanotechnology in food packaging and food safety: barrier materials, antimicrobials and sensors. J. Colloid Interface Sci. 363, 1-24 (2011).
6. 2 nanocomposite films via melting processing. Nano Letters 7, 2529-2534 (2007). (Pubitemid 47310156)
7. 2 nanocomposites: interface effects on biocidal properties. Adv. Funct. Mater. 18, 1949-1960 (2008).
8. Hamming, L. M., Qiao, R. & Messersmith, P. B. Effects of dispersion and interfacial modification on the macroscale properties of TiO(2) polymer matrix nanocomposites. Compos. Sci. Technol. 69, 1880-1886 (2009).
9. Luan, J., Wang, S., Hu, Z. & Zhang, L. Synthesis techniques, properties and applications of polymer nanocomposites. Curr. Org. Synth. 9, 114-136 (2012).
10. Kubacka, A. et al. Surface-enhanced Raman scattering from uniform gold and silver nanoparticle-coated substrates. J. Phys. Chem. C 113, 9182-9190 (2009).
11. 2-anatase antimicrobial activity: Polymer-oxide thin films. Appl. Catal. B 89, 441-447 (2009).
12. 2-containing polymer thin films: UV and visible light performance. Appl. Catal. B 121-122, 230-248 (2012).
13. Wiener, J. et al. Multiple antibiotic-resistant Klebsiella and Escherichia coli in nursing homes. J. Am. Med. Assoc. 281, 517-523 (1999). (Pubitemid 29081304)
14. Josset, S., Keller, N., Lett, M. C., Ledoux, M. J. & Keller, V. Numeration methods for targeting photoactive materials in the UV-A photocatalytic removal of microorganisms. Chem. Soc. Rev. 37, 744-755 (2008).
15. Asahani, P. V., Mun, G. L. K., Handi, M. P. & Valiyaveetil, S. Cytotoxicity and genotoxicity of silver nanoparticles in human cells. ACS Nano 3, 279-290 (2009).
16. Llorens, A., Lloret, E., Picouet, P. A., Trbjevich, R. & Fernández, A. Metallic-based micro and nanocomposites in food contact materials and active food packaging. Trends Food Sci. Technol. 24, 19-29 (2012).
17. Elechiguerra, J. L. et al. Interaction of silver nanoparticles with HIV-1. J. Nanobiotechnol. 3, 6-15 (2005).
18. Lok, C.-N. et al. Proteomic analysis of the mode of antibacterial action of silver nanoparticles. J. Proteome Res. 5, 916-924 (2006).
19. 2 interface by ATR-FTIR and laser kinetic spectroscopy. Langmuir 21, 4631-4641 (2005). (Pubitemid 40683394)
20. Foster, H. A., Ditta, I. B., Varghese, S. & Steele, A. Photocatalytic disinfection using titanium dioxide: spectrum and mechanism of antimicrobial activity. Appl. Microbiol. Biotechnol. 90, 1847-1868 (2011).
21. Matsumaga, T., Tomada, R., Nakajima, T. & Wake, H. FEBS Microbiol. Lett. 29, 211-214 (1985).
22. 2 photocatalysis causes DNA damage via fenton reaction-generated hydroxyl radicals during the recovery period. Appl. Environ. Microbiol. 73, 7740-7743 (2007).
23. Owen, R. W., Spiegelhalder, B. & Bartsch, H. Generation of reactive oxygen species by the faecal matrix. Gut 46, 225-232 (2000). (Pubitemid 30305849)
24. Bielefeldt-Ohmann, H. & Babiuk, L. A. In vitro generation of hydrogen peroxide andof superoxide anionbybovine polymorphonuclear neutrophilic granulocytes, blood monocytes, and alveolar macrophages. Inflammation 8, 251-275 (1984). (Pubitemid 14061741)
25. Oberhardt, M. A., Puchaka, J., Fryer, K. E., Martins dos Santos, V. A. & Papin, J. A. Genome-scale metabolic network analysis of the opportunistic pathogen Pseudomonas aeruginosa PAO1. J. Bacteriol. 190, 2790-2803 (2008). (Pubitemid 351508178)
26. Oberhardt, M. A., Puchka, J., Fryer, K. E., Martins dos Santos, V. A. & Papin, J. A. Reconciliation of genome-scale metabolic reconstructions for comparative systems analysis. PLoS Comput Biol. 7, e1001116 (2011).
27. Cabili, T. M. N., Herrgård, M. J. & Palsson, B. Ø. Network-based prediction of human tissue-specific metabolism. Nat. Biotechnol. 26, 1003-1010 (2008).
28. Schurek, K. N. et al. Involvement of pmrAB and phoPQ in polymyxin B adaptation and inducible resistance in non-cystic fibrosis clinical isolates of Pseudomonas aeruginosa. Antimicrob. Agents Chemother. 53, 4345-4351 (2009).
29. Schobert, M. & Görisch, H. Cytochrome c550 is an essential component of the quinoprotein ethanol oxidation system in Pseudomonas aeruginosa: cloning and sequencing of the genes encoding cytochrome c550 and an adjacent acetaldehyde dehydrogenase. Microbiology 145, 471-481 (1999). (Pubitemid 29090102)
30. Kulajta, C., Thumfart, J. O., Haid, S. & Daldal, F. Multi-step assembly pathway of the cbb3-type cytochrome c oxidase complex. J. Mol. Biol. 355, 989-1004 (2006). (Pubitemid 43012142)
31. Castiglione, N., Rinaldo, R., Giardina, G. & Cutruzzolà, F. The transcription factor DNR from Pseudomonas aeruginosa specifically requires nitric oxide and haem for the activation of a target promoter in Escherichia coli. Microbiology 155, 2838-2844 (2009).
32. Piper, M. D., Hong, S. P., Ball, G. E. & Dawes, I. W. Regulation of the balance of one-carbon metabolism in Saccharomyces cerevisiae. J. Biol. Chem. 275, 30987-30995 (2000).
33. Oberpichler, I. et al. A photolyase-like protein from Agrobacterium tumefaciens with an iron-sulfur cluster. PLoS One 6, e26775 (2011).
34. Nishiya, Y., Zuihara, S. & Imanaka, T. Active site analysis and stabilization of sarcosine oxidase by the substitution of cysteine residues. Appl. Environ. Microbiol. 61, 367-370 (1995).
35. Haddad, A., Jensen, V., Becker, T. & Häussler, S. The Pho regulon influences biofilm formation and type three secretion in Pseudomonas aeruginosa. Environ. Microbiol. Rep. 1, 488-494 (2009).
36. Ratliff, M., Zhu, W., Deshmukh, R., Wilks, A. & Stojiljkovic, I. Homologues of neisserial heme oxygenase in gram-negative bacteria: degradation of heme by the product of the pigA gene of Pseudomonas aeruginosa. J. Bacteriol. 183, 6394-6403 (2001). (Pubitemid 34059413)
37. Layer, G., Reichelt, J., Jahn, D. & Heinz, D. W. Structure and function of enzymes in heme biosynthesis. Protein Sci. 19, 1137-1161 (2010).
38. Lamont, I. L. & Martin, L. W. Identification and characterization of novel pyoverdine synthesis genes in Pseudomonas aeruginosa. Microbiology 149, 833-842 (2003). (Pubitemid 36553353)
39. Imperi, F., Tiburzi, F., Fimia, G. M. & Visca, P. Transcriptional control of the pvdS iron starvation sigma factor gene by the master regulator of sulfur metabolism CysB in Pseudomonas aeruginosa. Environ. Microbiol. 12, 1630-1642 (2010).
40. Johnson, L., Heidi, M., Uliana, K., Yan, S. & Shawn, L. Surface-localized spermidine protects the Pseudomonas aeruginosa outer membrane from antibiotic treatment and oxidative stress. J. Bacteriol. 194, 813-826 (2012).
41. Kasukabe, Y. et al. Overexpression of spermidine synthase enhances tolerance to multiple environmental stresses and up-regulates the expression of various stressregulated genes in transgenic Arabidopsis thaliana. Plant Cell Physiol. 45, 712-722 (2004). (Pubitemid 38893495)
42. Zhou, L., Wang, J. & Zhang, L. H. Modulation of bacterial Type III secretion system by a spermidine transporter dependent signaling pathway. PLoS One 2, e1291 (2007).
43. Winson, M. K. et al. Multiple N-acyl-L-homoserine lactone signal molecules regulate production of virulence determinants and secondary metabolites in Pseudomonas aeruginosa. Proc. Natl. Acad. Sci. USA 92, 9427-9431 (1995).
44. Riedel, K. et al. N-acylhomoserine-lactone-mediated communication between Pseudomonas aeruginosa and Burkholderia cepacia in mixed biofilms. Microbiology 147, 3249-3262 (2001). (Pubitemid 33150331)
45. Kawaguchi, T., Chen, Y. P., Norman, R. S. & Decho, A. W. Rapid screening of quorum-sensing signal N-acyl homoserine lactones by an in vitro cell-free assay. Appl. Environ. Microbiol. 74, 3667-3671 (2008). (Pubitemid 351874896)
46. Campisano, A., Overhage, J. & Rehm, B. H. The polyhydroxyalkanoate biosynthesis genes are differentially regulated in planktonic-and biofilm-grown Pseudomonas aeruginosa. J. Biotechnol. 133, 442-452 (2008).
47. Prieto, M. A., Bühler, B., Jung, K., Witholt, B. & Kessler, B. PhaF, a polyhydroxyalkanoate-granule-associated protein of Pseudomonas oleovorans GPo1 involved in the regulatory expression system for pha genes. J. Bacteriol. 181, 858-868 (1999). (Pubitemid 29061568)
48. Jacobs, M. A. et al. Comprehensive transposon mutant library of Pseudomonas aeruginosa. Proc. Natl. Acad. Sci. USA 100, 14339-14344 (2003). (Pubitemid 37499238)
49. Lewenza, S. et al. Construction of a mini-Tn5-luxCDABE mutant library in Pseudomonas aeruginosa PAO1: a tool for identifying differentially regulated genes. Genome Res. 15, 583-589 (2005). (Pubitemid 41057821)
50. Wei, K. et al. hpaR, a putative marR family transcriptional regulator, is positively controlled by HrpG and HrpX and involved in the pathogenesis, hypersensitive response, and extracellular protease production of Xanthomonas campestris pathovar campestris. J. Bacteriol. 189, 2055-2062 (2007). (Pubitemid 46446169)
51. Webb, S. J. et al. Cell death in Pseudomonas aeruginosa biofilm development. J. Bacteriol. 185, 4585-4592 (2003).
52. Chernousova, S. & Epple, M. Silver as antibacterial agent: ion, nanoparticle, and metal. Angew. Chem. Int. Ed. 52, 1636-1653 (2013).
53. Reyes, V. C., Li, M., Hoek, E. M., Mahendra, S. & Damoiseaux, R. Genome-wide assessment in Escherichia coli reveals time-dependent nanotoxicity paradigms. ACS Nano 6, 9402-9415 (2012).
54. Thingholm, T. E., Jørgensen, T. J., Jensen, O. N. & Larsen, M. R. Highly selective enrichment of phosphorylated peptides using titanium dioxide. Nat. Protoc. 1, 1929-1935 (2006). (Pubitemid 46773313)
55. Richardson, B. M., Soderblom, E. J., Thompson, J. W. & Moseley, M. A. Automated, reproducible, titania-based phosphopeptide enrichment strategy for label-free quantitative phosphoproteomics. J. Biomol. Tech. 24, 8-16 (2013).
56. 2-reversed-phase high-performance liquid chromatography phosphochip coupled to a quadrupole time-of-flight mass spectrometer. Anal. Chem. 82, 824-832 (2010).
57. Schellenberger, J. et al. Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0. Nat. Protoc. 6, 1290-1307 (2011).
58. Jensen, P. A., Kyla, A. L. & Jason, A. P. TIGER: Toolbox for integrating genome-scale metabolic models, expression data, and transcriptional regulatory networks. BMC Syst. Biol. 5, 147 (2011).
59. Vizcaino, J. A. et al. The Proteomics Identifications (PRIDE) database and associated tools: status in 2013. Nucleic Acids Res. 41(D1), D1063-1069 (2013).