-
2
-
-
84874947727
-
The BioGRID interaction database: 2013 update
-
Chatr-Aryamontri, A. et al. (2013) The BioGRID interaction database: 2013 update. Nucleic Acids Res., 41, D816-D823.
-
(2013)
Nucleic Acids Res.
, vol.41
-
-
Chatr-Aryamontri, A.1
-
3
-
-
84874289423
-
Graphlet-based measures are suitable for biological network comparison
-
Hayes, W. et al. (2013) Graphlet-based measures are suitable for biological network comparison. Bioinformatics (Oxford, England), 29, 483-491.
-
(2013)
Bioinformatics (Oxford, England)
, vol.29
, pp. 483-491
-
-
Hayes, W.1
-
4
-
-
4444268694
-
Efficient sampling algorithm for estimating subgraph concentrations and detecting network motifs
-
Kashtan, N. et al. (2004) Efficient sampling algorithm for estimating subgraph concentrations and detecting network motifs. Bioinformatics, 20, 1746-1758.
-
(2004)
Bioinformatics
, vol.20
, pp. 1746-1758
-
-
Kashtan, N.1
-
5
-
-
0033732881
-
Finding and counting small induced subgraphs efficiently
-
Kloks, T. et al. (2000) Finding and counting small induced subgraphs efficiently. Inf. Process. Lett., 74, 115-121.
-
(2000)
Inf. Process. Lett.
, vol.74
, pp. 115-121
-
-
Kloks, T.1
-
7
-
-
79955751671
-
Integrative network alignment reveals large regions of global network similarity in yeast and human
-
Kuchaiev, O. and Prz?ulj, N. (2011) Integrative network alignment reveals large regions of global network similarity in yeast and human. Bioinformatics (Oxford, England), 27, 1390-1396.
-
(2011)
Bioinformatics (Oxford, England)
, vol.27
, pp. 1390-1396
-
-
Kuchaiev, O.1
Przulj, N.2
-
8
-
-
77956576710
-
Topological network alignment uncovers biological function and phylogeny
-
Kuchaiev, O. et al. (2010) Topological network alignment uncovers biological function and phylogeny. J. R. Soc. Interface, 7, 1341-1354.
-
(2010)
J. R. Soc. Interface
, vol.7
, pp. 1341-1354
-
-
Kuchaiev, O.1
-
9
-
-
78651512420
-
GraphCrunch 2: Software tool for network modeling, alignment and clustering
-
Kuchaiev, O. et al. (2011) GraphCrunch 2: software tool for network modeling, alignment and clustering. BMC Bioinformatics, 12, 24.
-
(2011)
BMC Bioinformatics
, vol.12
, pp. 24
-
-
Kuchaiev, O.1
-
10
-
-
84856046088
-
RAGE-A rapid graphlet enumerator for large networks
-
Marcus, D. and Shavitt, Y. (2012) RAGE-a rapid graphlet enumerator for large networks. Comput. Netw., 56, 810-819.
-
(2012)
Comput. Netw.
, vol.56
, pp. 810-819
-
-
Marcus, D.1
Shavitt, Y.2
-
11
-
-
49649109285
-
Uncovering biological network function via graphlet degree signatures
-
Milenković , T. and Prz?ulj, N. (2008) Uncovering biological network function via graphlet degree signatures. Cancer Inform., 6, 257-273.
-
(2008)
Cancer Inform.
, vol.6
, pp. 257-273
-
-
Milenković, T.1
Przulj, N.2
-
12
-
-
41349101546
-
GraphCrunch: A tool for large network analyses
-
Milenković, T. et al. (2008) GraphCrunch: a tool for large network analyses. BMC Bioinformatics, 9, 70.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 70
-
-
Milenković, T.1
-
13
-
-
77955499935
-
Optimal network alignment with graphlet degree vectors
-
Milenković, T. et al. (2010a) Optimal network alignment with graphlet degree vectors. Cancer Inform., 9, 121-137.
-
(2010)
Cancer Inform.
, vol.9
, pp. 121-137
-
-
Milenković, T.1
-
14
-
-
76049094356
-
Systems-level cancer gene identification from protein interaction network topology applied to melanogenesis-related functional genomics data
-
Milenković, T. et al. (2010b) Systems-level cancer gene identification from protein interaction network topology applied to melanogenesis-related functional genomics data. J. R. Soc., 7, 423-437.
-
(2010)
J. R. Soc.
, vol.7
, pp. 423-437
-
-
Milenković, T.1
-
15
-
-
80052047022
-
Dominating biological networks
-
Milenković, T. et al. (2011) Dominating biological networks. PLoS One, 6, e23016.
-
(2011)
PLoS One
, vol.6
-
-
Milenković, T.1
-
17
-
-
33846672214
-
Biological network comparison using graphlet degree distribution
-
Prz?ulj, N. (2007) Biological network comparison using graphlet degree distribution. Bioinformatics (Oxford, England), 23, e177-e183.
-
(2007)
Bioinformatics (Oxford, England)
, vol.23
-
-
Przulj, N.1
-
18
-
-
12344273375
-
Modeling interactome: Scale-free or geometric?
-
Prz?ulj, N. et al. (2004)Modeling interactome: scale-free or geometric? Bioinformatics (Oxford, England), 20, 3508-3515.
-
(2004)
Bioinformatics (Oxford, England)
, vol.20
, pp. 3508-3515
-
-
Przulj, N.1
-
19
-
-
33645803834
-
Efficient estimation of graphlet frequency distributions in protein-protein interaction networks
-
Prz?ulj, N. et al. (2006) Efficient estimation of graphlet frequency distributions in protein-protein interaction networks. Bioinformatics (Oxford, England), 22, 974-980.
-
(2006)
Bioinformatics (Oxford, England)
, vol.22
, pp. 974-980
-
-
Przulj, N.1
-
20
-
-
0347755535
-
The database of interacting proteins: 2004 update
-
Salwinski, L. et al. (2004) The database of interacting proteins: 2004 update. Nucleic Acids Res. 32, D449-D451.
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Salwinski, L.1
-
21
-
-
84866447355
-
Graphlet-based edge clustering reveals pathogen-interacting proteins
-
Solava, R.W. et al. (2012) Graphlet-based edge clustering reveals pathogen-interacting proteins. Bioinformatics (Oxford, England), 28, i480-i486.
-
(2012)
Bioinformatics (Oxford, England)
, vol.28
-
-
Solava, R.W.1
-
23
-
-
33845676319
-
Efficient detection of network motifs. IEEE/ACM Trans
-
Wernicke, S. (2006) Efficient detection of network motifs. IEEE/ACM Trans. Comput. Biol. Bioinform., 3, 347-359.
-
(2006)
Comput. Biol. Bioinform.
, vol.3
, pp. 347-359
-
-
Wernicke, S.1
-
24
-
-
33646153295
-
FANMOD: A tool for fast network motif detection
-
Wernicke, S. and Rasche, F. (2006) FANMOD: a tool for fast network motif detection. Bioinformatics (Oxford, England), 22, 1152-1153.
-
(2006)
Bioinformatics (Oxford, England)
, vol.22
, pp. 1152-1153
-
-
Wernicke, S.1
Rasche, F.2
-
25
-
-
84856118125
-
Computing graphlet signatures of network nodes and motifs in Cytoscape with GraphletCounter
-
Whelan, C. and Sönmez, K. (2012) Computing graphlet signatures of network nodes and motifs in Cytoscape with GraphletCounter. Bioinformatics (Oxford, England), 28, 290-291.
-
(2012)
Bioinformatics (Oxford, England)
, vol.28
, pp. 290-291
-
-
Whelan, C.1
Sönmez, K.2
|