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Volumn 185, Issue 3, 2014, Pages 440-447

Crystallographic analysis of Neisseria meningitidis PorB extracellular loops potentially implicated in TLR2 recognition

Author keywords

Crystal structure; Neisseriae; Outer membrane protein; Toll like receptor

Indexed keywords

BACTERIAL PROTEIN; MUTANT PROTEIN; PORIN; PROTEIN PORB; TOLL LIKE RECEPTOR 2; UNCLASSIFIED DRUG;

EID: 84894451153     PISSN: 10478477     EISSN: 10958657     Source Type: Journal    
DOI: 10.1016/j.jsb.2013.12.006     Document Type: Article
Times cited : (29)

References (55)
  • 2
    • 46249128687 scopus 로고    scopus 로고
    • Variation in the Neisseria lactamica porin, and its relationship to meningococcal PorB
    • Bennett J.S., Callaghan M.J., Derrick J.P., Maiden M.C. Variation in the Neisseria lactamica porin, and its relationship to meningococcal PorB. Microbiology 2008, 154:1525-1534.
    • (2008) Microbiology , vol.154 , pp. 1525-1534
    • Bennett, J.S.1    Callaghan, M.J.2    Derrick, J.P.3    Maiden, M.C.4
  • 5
    • 7044237192 scopus 로고    scopus 로고
    • Gonococcal porin IB activates NF-kappaB in human urethral epithelium and increases the expression of host antiapoptotic factors
    • Binnicker M.J., Williams R.D., Apicella M.A. Gonococcal porin IB activates NF-kappaB in human urethral epithelium and increases the expression of host antiapoptotic factors. Infect. Immun. 2004, 72:6408-6417.
    • (2004) Infect. Immun. , vol.72 , pp. 6408-6417
    • Binnicker, M.J.1    Williams, R.D.2    Apicella, M.A.3
  • 6
    • 79953890803 scopus 로고    scopus 로고
    • The structural biology of Toll-like receptors
    • Botos I., Segal D.M., Davies D.R. The structural biology of Toll-like receptors. Structure 2011, 19:447-459.
    • (2011) Structure , vol.19 , pp. 447-459
    • Botos, I.1    Segal, D.M.2    Davies, D.R.3
  • 7
    • 38449095416 scopus 로고    scopus 로고
    • Neisseria meningitidis PorB, a TLR2 ligand, induces an antigen-specific eosinophil recall response: potential adjuvant for helminth vaccines?
    • Burke J.M., Ganley-Leal L.M., Khatri A., Wetzler L.M. Neisseria meningitidis PorB, a TLR2 ligand, induces an antigen-specific eosinophil recall response: potential adjuvant for helminth vaccines?. J. Immunol. 2007, 179:3222-3230.
    • (2007) J. Immunol. , vol.179 , pp. 3222-3230
    • Burke, J.M.1    Ganley-Leal, L.M.2    Khatri, A.3    Wetzler, L.M.4
  • 8
    • 33846086933 scopus 로고    scopus 로고
    • Canonical sampling through velocity rescaling
    • Bussi G., Donadio D., Parrinello M. Canonical sampling through velocity rescaling. J. Chem. Phys. 2007, 126:014101.
    • (2007) J. Chem. Phys. , vol.126 , pp. 014101
    • Bussi, G.1    Donadio, D.2    Parrinello, M.3
  • 9
    • 26444549974 scopus 로고    scopus 로고
    • A predominantly anti-inflammatory cytokine profile is associated with disease severity in meningococcal sepsis
    • Carrol E.D., Thomson A.P., Jones A.P., Jeffers G., Hart C.A. A predominantly anti-inflammatory cytokine profile is associated with disease severity in meningococcal sepsis. Intensive Care Med. 2005, 31:1415-1419.
    • (2005) Intensive Care Med. , vol.31 , pp. 1415-1419
    • Carrol, E.D.1    Thomson, A.P.2    Jones, A.P.3    Jeffers, G.4    Hart, C.A.5
  • 10
    • 0023607404 scopus 로고
    • The stonehouse survey: nasopharyngeal carriage of meningococci and Neisseria lactamica
    • Cartwright K.A., Stuart J.M., Jones D.M., Noah N.D. The stonehouse survey: nasopharyngeal carriage of meningococci and Neisseria lactamica. Epidemiol. Infect. 1987, 99:591-601.
    • (1987) Epidemiol. Infect. , vol.99 , pp. 591-601
    • Cartwright, K.A.1    Stuart, J.M.2    Jones, D.M.3    Noah, N.D.4
  • 11
    • 51649099771 scopus 로고    scopus 로고
    • Neisseria meningitidis PorB, a Toll-like receptor 2 ligand, improves the capacity of Francisella tularensis lipopolysaccharide to protect mice against experimental tularemia
    • Chiavolini D., Weir S., Murphy J.R., Wetzler L.M. Neisseria meningitidis PorB, a Toll-like receptor 2 ligand, improves the capacity of Francisella tularensis lipopolysaccharide to protect mice against experimental tularemia. Clin. Vaccine Immunol. 2008, 15:1322-1329.
    • (2008) Clin. Vaccine Immunol. , vol.15 , pp. 1322-1329
    • Chiavolini, D.1    Weir, S.2    Murphy, J.R.3    Wetzler, L.M.4
  • 12
    • 84858311167 scopus 로고    scopus 로고
    • Membrane protein simulations using AMBER force field and Berger lipid parameters
    • Cordomí A., Caltabiano G., Pardo L. Membrane protein simulations using AMBER force field and Berger lipid parameters. J. Chem. Theory Comput. 2012, 8(3):948-958.
    • (2012) J. Chem. Theory Comput. , vol.8 , Issue.3 , pp. 948-958
    • Cordomí, A.1    Caltabiano, G.2    Pardo, L.3
  • 14
    • 0032954440 scopus 로고    scopus 로고
    • Structural and evolutionary inference from molecular variation in Neisseria porins
    • Derrick J.P., Urwin R., Suker J., Feavers I.M., Maiden M.C. Structural and evolutionary inference from molecular variation in Neisseria porins. Infect. Immun. 1999, 67:2406-2413.
    • (1999) Infect. Immun. , vol.67 , pp. 2406-2413
    • Derrick, J.P.1    Urwin, R.2    Suker, J.3    Feavers, I.M.4    Maiden, M.C.5
  • 16
    • 0001585978 scopus 로고    scopus 로고
    • Improving efficiency of large timescale molecular dynamics simulations of hydrogen-rich systems
    • Feenstra K.A., Hess B., Berendsen H.J. Improving efficiency of large timescale molecular dynamics simulations of hydrogen-rich systems. J. Comput. Chem. 1999, 20:786-798.
    • (1999) J. Comput. Chem. , vol.20 , pp. 786-798
    • Feenstra, K.A.1    Hess, B.2    Berendsen, H.J.3
  • 17
    • 69049103161 scopus 로고    scopus 로고
    • Neisseria gonorrhoeae infection protects human endocervical epithelial cells from apoptosis via expression of host antiapoptotic proteins
    • Follows S.A., Murlidharan J., Massari P., Wetzler L.M., Genco C.A. Neisseria gonorrhoeae infection protects human endocervical epithelial cells from apoptosis via expression of host antiapoptotic proteins. Infect. Immun. 2009, 77:3602-3610.
    • (2009) Infect. Immun. , vol.77 , pp. 3602-3610
    • Follows, S.A.1    Murlidharan, J.2    Massari, P.3    Wetzler, L.M.4    Genco, C.A.5
  • 18
    • 0017843254 scopus 로고
    • Carriage of Neisseria meningitidis and Neisseria lactamica in infants and children
    • Gold R., Goldschneider I., Lepow M.L., Draper T.F., Randolph M. Carriage of Neisseria meningitidis and Neisseria lactamica in infants and children. J. Infect. Dis. 1978, 137:112-121.
    • (1978) J. Infect. Dis. , vol.137 , pp. 112-121
    • Gold, R.1    Goldschneider, I.2    Lepow, M.L.3    Draper, T.F.4    Randolph, M.5
  • 19
    • 80855143674 scopus 로고    scopus 로고
    • Targeting of Neisserial PorB to the mitochondrial outer membrane: an insight on the evolution of beta-barrel protein assembly machines
    • Jiang J.H., Davies J.K., Lithgow T., Strugnell R.A., Gabriel K. Targeting of Neisserial PorB to the mitochondrial outer membrane: an insight on the evolution of beta-barrel protein assembly machines. Mol. Microbiol. 2011, 82:976-987.
    • (2011) Mol. Microbiol. , vol.82 , pp. 976-987
    • Jiang, J.H.1    Davies, J.K.2    Lithgow, T.3    Strugnell, R.A.4    Gabriel, K.5
  • 20
    • 84875862947 scopus 로고    scopus 로고
    • Identification of a cation transport pathway in Neisseria meningitidis PorB
    • Kattner C., Zaucha J., Jaenecke F., Zachariae U., Tanabe M. Identification of a cation transport pathway in Neisseria meningitidis PorB. Proteins 2013, 81:830-840.
    • (2013) Proteins , vol.81 , pp. 830-840
    • Kattner, C.1    Zaucha, J.2    Jaenecke, F.3    Zachariae, U.4    Tanabe, M.5
  • 22
    • 80052503022 scopus 로고    scopus 로고
    • Computational electrophysiology: the molecular dynamics of ion channel permeation and selectivity in atomistic detail
    • Kutzner C., Grubmuller H., de Groot B.L., Zachariae U. Computational electrophysiology: the molecular dynamics of ion channel permeation and selectivity in atomistic detail. Biophys. J. 2011, 101:809-817.
    • (2011) Biophys. J. , vol.101 , pp. 809-817
    • Kutzner, C.1    Grubmuller, H.2    de Groot, B.L.3    Zachariae, U.4
  • 24
    • 2942627589 scopus 로고    scopus 로고
    • DNA sequence analysis of the PorB protein of nonserotypeable serogroup C ET-15 meningococci suggests a potential mutational hot spot on their serotype antigens
    • Law D.K., Henderson A.M., Tsang R.S. DNA sequence analysis of the PorB protein of nonserotypeable serogroup C ET-15 meningococci suggests a potential mutational hot spot on their serotype antigens. J. Clin. Microbiol. 2004, 42:2718-2723.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 2718-2723
    • Law, D.K.1    Henderson, A.M.2    Tsang, R.S.3
  • 26
    • 38349075841 scopus 로고    scopus 로고
    • The PorB porin from commensal Neisseria lactamica induces Th1 and Th2 immune responses to ovalbumin in mice and is a potential immune adjuvant
    • Liu X., Wetzler L.M., Massari P. The PorB porin from commensal Neisseria lactamica induces Th1 and Th2 immune responses to ovalbumin in mice and is a potential immune adjuvant. Vaccine 2008, 26:786-796.
    • (2008) Vaccine , vol.26 , pp. 786-796
    • Liu, X.1    Wetzler, L.M.2    Massari, P.3
  • 27
    • 78649977974 scopus 로고    scopus 로고
    • Human airway epithelial cell responses to Neisseria lactamica and purified porin via Toll-like receptor 2-dependent signaling
    • Liu X., Wetzler L.M., Nascimento L.O., Massari P. Human airway epithelial cell responses to Neisseria lactamica and purified porin via Toll-like receptor 2-dependent signaling. Infect. Immun. 2010, 78:5314-5323.
    • (2010) Infect. Immun. , vol.78 , pp. 5314-5323
    • Liu, X.1    Wetzler, L.M.2    Nascimento, L.O.3    Massari, P.4
  • 29
    • 0034255514 scopus 로고    scopus 로고
    • Neisseria meningitidis porin PorB interacts with mitochondria and protects cells from apoptosis
    • Massari P., Ho Y., Wetzler L.M. Neisseria meningitidis porin PorB interacts with mitochondria and protects cells from apoptosis. Proc. Natl. Acad. Sci. USA 2000, 97:9070-9075.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 9070-9075
    • Massari, P.1    Ho, Y.2    Wetzler, L.M.3
  • 30
    • 0037083638 scopus 로고    scopus 로고
    • Cutting edge: immune stimulation by neisserial porins is Toll-like receptor 2 and MyD88 dependent
    • Massari P., Henneke P., Ho Y., Latz E., Golenbock D.T., Wetzler L.M. Cutting edge: immune stimulation by neisserial porins is Toll-like receptor 2 and MyD88 dependent. J. Immunol. 2002, 168:1533-1537.
    • (2002) J. Immunol. , vol.168 , pp. 1533-1537
    • Massari, P.1    Henneke, P.2    Ho, Y.3    Latz, E.4    Golenbock, D.T.5    Wetzler, L.M.6
  • 32
    • 77349121848 scopus 로고    scopus 로고
    • Meningococcal porin PorB prevents cellular apoptosis in a Toll-like receptor 2- and NF-kappaB-independent manner
    • Massari P., Gunawardana J., Liu X., Wetzler L.M. Meningococcal porin PorB prevents cellular apoptosis in a Toll-like receptor 2- and NF-kappaB-independent manner. Infect. Immun. 2010, 78:994-1003.
    • (2010) Infect. Immun. , vol.78 , pp. 994-1003
    • Massari, P.1    Gunawardana, J.2    Liu, X.3    Wetzler, L.M.4
  • 33
    • 33846426122 scopus 로고    scopus 로고
    • Solving structures of protein complexes by molecular replacement with Phaser
    • McCoy A.J. Solving structures of protein complexes by molecular replacement with Phaser. Acta Crystallogr. Sect. D: Biol. Crystallogr. 2007, 63:32-41.
    • (2007) Acta Crystallogr. Sect. D: Biol. Crystallogr. , vol.63 , pp. 32-41
    • McCoy, A.J.1
  • 37
    • 0347479229 scopus 로고    scopus 로고
    • Molecular basis of bacterial outer membrane permeability revisited
    • Nikaido H. Molecular basis of bacterial outer membrane permeability revisited. Microbiol. Mol. Biol. Rev. 2003, 67:593-656.
    • (2003) Microbiol. Mol. Biol. Rev. , vol.67 , pp. 593-656
    • Nikaido, H.1
  • 38
    • 0031059866 scopus 로고    scopus 로고
    • Processing of X-ray diffraction data collected in oscillation mode. Methods in enzymology
    • Academic Press, New York
    • Otwinowski Z., Minor W. Processing of X-ray diffraction data collected in oscillation mode. Methods in enzymology. Macromolecular Crystallography, Part A 1997, vol. 276:307-326. Academic Press, New York.
    • (1997) Macromolecular Crystallography, Part A , vol.276 , pp. 307-326
    • Otwinowski, Z.1    Minor, W.2
  • 40
    • 0028306035 scopus 로고
    • Expression of large amounts of neisserial porin proteins in Escherichia coli and refolding of the proteins into native trimers
    • Qi H.L., Tai J.Y., Blake M.S. Expression of large amounts of neisserial porin proteins in Escherichia coli and refolding of the proteins into native trimers. Infect. Immun. 1994, 62:2432-2439.
    • (1994) Infect. Immun. , vol.62 , pp. 2432-2439
    • Qi, H.L.1    Tai, J.Y.2    Blake, M.S.3
  • 41
    • 45649084560 scopus 로고    scopus 로고
    • Backrub-like backbone simulation recapitulates natural protein conformational variability and improves mutant side-chain prediction
    • Smith C.A., Kortemme T. Backrub-like backbone simulation recapitulates natural protein conformational variability and improves mutant side-chain prediction. J. Mol. Biol. 2008, 380:742-756.
    • (2008) J. Mol. Biol. , vol.380 , pp. 742-756
    • Smith, C.A.1    Kortemme, T.2
  • 42
    • 70350347614 scopus 로고    scopus 로고
    • Expression, purification and preliminary X-ray analysis of the Neisseria meningitidis outer membrane protein PorB
    • Tanabe M., Iverson T.M. Expression, purification and preliminary X-ray analysis of the Neisseria meningitidis outer membrane protein PorB. Acta Crystallogr., Sect. F: Struct. Biol. Cryst. Commun. 2009, 65:996-1000.
    • (2009) Acta Crystallogr., Sect. F: Struct. Biol. Cryst. Commun. , vol.65 , pp. 996-1000
    • Tanabe, M.1    Iverson, T.M.2
  • 43
    • 77951057326 scopus 로고    scopus 로고
    • Structural basis for solute transport, nucleotide regulation, and immunological recognition of Neisseria meningitidis PorB
    • Tanabe M., Nimigean C.M., Iverson T.M. Structural basis for solute transport, nucleotide regulation, and immunological recognition of Neisseria meningitidis PorB. Proc. Natl. Acad. Sci. USA 2010, 107:6811-6816.
    • (2010) Proc. Natl. Acad. Sci. USA , vol.107 , pp. 6811-6816
    • Tanabe, M.1    Nimigean, C.M.2    Iverson, T.M.3
  • 44
    • 0027968068 scopus 로고
    • ClustalW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson J.D., Higgins D.G., Gibson T.J. ClustalW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 1994, 22:4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 45
    • 84867608908 scopus 로고    scopus 로고
    • The amino acid sequence of Neisseria lactamica PorB surface-exposed loops influences Toll-like receptor 2-dependent cell activation
    • Toussi D.N., Carraway M., Wetzler L.M., Lewis L.A., Liu X., Massari P. The amino acid sequence of Neisseria lactamica PorB surface-exposed loops influences Toll-like receptor 2-dependent cell activation. Infect. Immun. 2012, 80:3417-3428.
    • (2012) Infect. Immun. , vol.80 , pp. 3417-3428
    • Toussi, D.N.1    Carraway, M.2    Wetzler, L.M.3    Lewis, L.A.4    Liu, X.5    Massari, P.6
  • 46
    • 4644237146 scopus 로고    scopus 로고
    • Distribution of surface protein variants among hyperinvasive meningococci: implications for vaccine design
    • Urwin R., Russell J.E., Thompson E.A., Holmes E.C., Feavers I.M., Maiden M.C. Distribution of surface protein variants among hyperinvasive meningococci: implications for vaccine design. Infect. Immun. 2004, 72:5955-5962.
    • (2004) Infect. Immun. , vol.72 , pp. 5955-5962
    • Urwin, R.1    Russell, J.E.2    Thompson, E.A.3    Holmes, E.C.4    Feavers, I.M.5    Maiden, M.C.6
  • 48
    • 63049088278 scopus 로고    scopus 로고
    • Pathogenic neisseriae: surface modulation, pathogenesis and infection control
    • Virji M. Pathogenic neisseriae: surface modulation, pathogenesis and infection control. Nat. Rev. Microbiol. 2009, 7:274-286.
    • (2009) Nat. Rev. Microbiol. , vol.7 , pp. 274-286
    • Virji, M.1
  • 50
    • 0029935132 scopus 로고    scopus 로고
    • Neisserial porins induce B lymphocytes to express costimulatory B7-2 molecules and to proliferate
    • Wetzler L.M., Ho Y., Reiser H. Neisserial porins induce B lymphocytes to express costimulatory B7-2 molecules and to proliferate. J. Exp. Med. 1996, 183:1151-1159.
    • (1996) J. Exp. Med. , vol.183 , pp. 1151-1159
    • Wetzler, L.M.1    Ho, Y.2    Reiser, H.3
  • 52
    • 77954256616 scopus 로고    scopus 로고
    • G_membed: efficient insertion of a membrane protein into an equilibrated lipid bilayer with minimal perturbation
    • Wolf M.G., Hoefling M., Aponte-Santamaria C., Grubmuller H., Groenhof G. G_membed: efficient insertion of a membrane protein into an equilibrated lipid bilayer with minimal perturbation. J. Comput. Chem. 2010, 31:2169-2174.
    • (2010) J. Comput. Chem. , vol.31 , pp. 2169-2174
    • Wolf, M.G.1    Hoefling, M.2    Aponte-Santamaria, C.3    Grubmuller, H.4    Groenhof, G.5
  • 53
    • 67349187462 scopus 로고    scopus 로고
    • Distribution of surface-protein variants of hyperinvasive meningococci in China
    • Yang L., Zhang X., Peng J., Zhu Y., Dong J., Xu J., Jin Q. Distribution of surface-protein variants of hyperinvasive meningococci in China. J. Infect. 2009, 58:358-367.
    • (2009) J. Infect. , vol.58 , pp. 358-367
    • Yang, L.1    Zhang, X.2    Peng, J.3    Zhu, Y.4    Dong, J.5    Xu, J.6    Jin, Q.7
  • 54
    • 4544256589 scopus 로고    scopus 로고
    • Neisseria meningitidis: an overview of the carriage state
    • Yazdankhah S.P., Caugant D.A. Neisseria meningitidis: an overview of the carriage state. J. Med. Microbiol. 2004, 53:821-832.
    • (2004) J. Med. Microbiol. , vol.53 , pp. 821-832
    • Yazdankhah, S.P.1    Caugant, D.A.2


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