New insights into high-molecular-weight glutenin subunits and sub-genomes of the perennial crop Thinopyrum intermedium (Triticeae)

Journal of Cereal Science

Volumn 59, Issue 2, 2014, Pages 203-210

  Zhang, Xiaofei ^a   DeHaan, Lee R ^b   Higgins, LeeAnn ^a   Markowski, Todd W ^a   Wyse, Donald L ^a   Anderson, James A ^a  

^a UNIVERSITY OF MINNESOTA   (United States)

^b THE LAND INSTITUTE   (United States)

Author keywords

High molecular weight glutenin subunits; Intermediate wheatgrass; Sub genomes; Thinopyrum intermedium

Indexed keywords

EID: 84894313250     PISSN: 07335210     EISSN: 10959963     Source Type: Journal    
DOI: 10.1016/j.jcs.2014.01.008     Document Type: Article

References (34)

1. Cao S., Xu H., Li Z., Wang X., Wang D., Zhang A., Jia X., Zhang X. Identification and characterization of a novel Ag. intermedium HMW-GS gene from T-aestivum-Ag. intermedium addition lines TAI-I series. J.Cereal Sci. 2007, 45:293-301.
2. Chen Q., Conner R.L., Laroche A., Thomas J.B. Genome analysis of Thinopyrum intermedium and Thinopyrum ponticum using genomic in situ hybridization. Genome 1998, 41:580-586.
3. Chen Q., Friebe B., Conner R.L., Laroche A., Thomas J.B., Gill B.S. Molecular cytogenetic characterization of Thinopyrum intermedium-derived wheat germplasm specifying resistance to wheat streak mosaic virus. Theor. Appl. Genet. 1998, 96:1-7.
4. Cox T.S., Van Tassel D.L., Cox C.M., DeHaan L.R. Progress in breeding perennial grains. Crop Pasture Sci. 2010, 61:513-521.
5. Culman S.W., Snapp S.S., Ollenburger M., Basso B., DeHaan L.R. Soil and water quality rapidly responds to the perennial grain Kernza wheatgrass. Agron. J. 2013, 105:735-744.
6. Dong L.L., Zhang X.F., Liu D.C., Fan H.J., Sun J.Z., Zhang Z.J., Qin H.J., Li B., Hao S.T., Li Z.S., Wang D.W., Zhang A.M., Ling H.Q. New insights into the organization, recombination, expression and functional mechanism of low molecular weight glutenin subunit genes in bread wheat. PLoS ONE 2010, 5:e13548.
7. Glover J.D., Reganold J.P., Bell L.W., Borevitz J., Brummer E.C., Buckler E.S., Cox C.M., Cox T.S., Crews T.E., Culman S.W., DeHaan L.R., Eriksson D., Gill B.S., Holland J., Hu F., Hulke B.S., Ibrahim A.M.H., Jackson W., Jones S.S., Murray S.C., Paterson A.H., Ploschuk E., Sacks E.J., Snapp S., Tao D., Van Tassel D.L., Wade L.J., Wyse D.L., Xu Y. Increased food and ecosystem security via perennial grains. Science 2010, 328:1638-1639.
8. Gupta R.B., MacRitchie F. Allelic variation at glutenin subunit and gliadin loci, Glu-1, Glu-3 and Gli-1 of Common Wheats. 2. Biochemical basis of the allelic effects on dough properties. J.Cereal Sci. 1994, 19:19-29.
9. Han F.P., Liu B., Fedak G., Liu Z.H. Genomic constitution and variation in five partial amphiploids of wheat - Thinopyrum intermedium as revealed by GISH, multicolor GISH and seed storage protein analysis. Theor. Appl. Genet. 2004, 109:1070-1076.
10. Harberd N.P., Flavell R.B., Thompson R.D. Identification of a transposon-like insertion in a Glu-1 allele of wheat. Mol. General. Genet. 1987, 209:326-332.
11. Jia J., Zhao S., Kong X., Li Y., Zhao G., He W., Appels R., Pfeifer M., Tao Y., Zhang X., Jing R., Zhang C., Ma Y., Gao L., Gao C., Spannagl M., Mayer K.F.X., Li D., Pan S., Zheng F., Hu Q., Xia X., Li J., Liang Q., Chen J., Wicker T., Gou C., Kuang H., He G., Luo Y., Keller B., Xia Q., Lu P., Wang J., Zou H., Zhang R., Xu J., Gao J., Middleton C., Quan Z., Liu G., Wang J., Yang H., Liu X., He Z., Mao L., Wang J., Yang H., Liu X., He Z., Mao L., Wang J. Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation. Nature 2013, 496:91-95. International Wheat Genome Sequencing Consortium.
12. Keller A., Nesvizhskii A.I., Kolker E., Aebersold R. Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search. Anal. Chem. 2002, 74:5383-5392.
13. Kishii M., Wang R.R.C., Tsujimoto H. GISH analysis revealed new aspect of genomic constitution of Thinopyrum intermedium. Czech J. Genet. Plant Breed. 2005, 41:91-95.
14. Kumar S., Nei M., Dudley J., Tamura K. MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Briefings Bioinforma. 2008, 9:299-306.
15. Lafiandra D., Dovidio R., Porceddu E., Margiotta B., Colaprico G. New data supporting high Mr glutenin subunit 5 as the determinant of quality differences among the pairs 5+10 vs 2+12. J.Cereal Sci. 1993, 18:197-205.
16. Li G.R., Liu C., Li C.H., Zhao J.M., Zhou L., Dai G., Yang E.N., Yang Z.J. Introgression of a novel Thinopyrum intermedium St-chromosome-specific HMW-GS gene into wheat. Mol. Breed. 2013, 31:843-853.
17. Li H., Wang X. Thinopyrum ponticum and Th. intermedium: the promising source of resistance to fungal and viral diseases of wheat. J.Genet. Genomics 2009, 36:557-565.
18. Li Z.X., Zhang X.Q., Zhang H.G., Cao S.H., Wang D.W., Hao S.T., Li L.H., Li H.J., Wang X.P. Isolation and characterization of a novel variant of HMW glutenin subunit gene from the St genome of Pseudoroegneria stipifolia. J.Cereal Sci. 2008, 47:429-437.
19. Lin-Moshier Y., Sebastian P.J., Higgins L., Sampson N.D., Hewitt J.E., Marchant J.S. Re-evaluation of the role of calcium homeostasis endoplasmic reticulum protein (CHERP) in cellular calcium signaling. J.Biol. Chem. 2013, 288:355-367.
20. Liu S., Zhu X., Tan Y., Liu S. Isolation and characterization of Glu-1 genes from the St genome of Pseudoroegneria libanotica. Gene 2012, 499:154-159.
21. Liu Z.W., Wang R.R.C. Genome analysis of Elytrigia caespitosa, Lophopyrum nodosum, Pseudoroegneria geniculata ssp. scythica, and Thinopyrum intermedium (Triticeae, Gramineae). Genome 1993, 36:102-111.
22. Mahelka V., Kopecký D., Baum B.R. Contrasting patterns of evolution of 45S and 5S rDNA families uncover new aspects in the genome constitution of the agronomically important grass Thinopyrum intermedium (Triticeae). Mol. Biol. Evol. 2013, 30:2065-2086.
23. Mahelka V., Kopecky D., Pastova L. On the genome constitution and evolution of intermediate wheatgrass (Thinopyrum intermedium: Poaceae, Triticeae). BMC Evol. biol. 2011, 11:127.
24. McIntosh R., Dubcovsky J., Rogers J., Morris C., Appels R., Xia X. Catalogue of gene symbols for wheat: 2010 supplement. Annu. Wheat Newsl. 2011, 56:273-282.
25. Nesvizhskii A.I., Keller A., Kolker E., Aebersold R. Astatistical model for identifying proteins by tandem mass spectrometry. Anal. Chem. 2003, 75:4646-4658.
26. Niu Z.X., Klindworth D.L., Wang R.R.C., Jauhar P.P., Larkin P.J., Xu S.S. Characterization of HMW glutenin subunits in Thinopyrum intermedium, Th. bessarabicum, Lophopyrum elongatum, Aegilops markgrafii, and their addition lines in wheat. Crop Sci. 2011, 51:667-677.
27. Payne P.I. Genetics of wheat storage proteins and the effect of allelic variation on bread-making quality. Annu. Rev. Plant Physiol. 1987, 38:141-153.
28. Shewry P.R., Halford N.G. Cereal seed storage proteins: structures, properties and role in grain utilization. J.Exp. Bot. 2002, 53:947-958.
29. Shewry P.R., Halford N.G., Tatham A.S., Popineau Y., Lafiandra D., Belton P.S. The high molecular weight subunits of wheat glutenin and their role in determining wheat processing properties. Adv. Food Nutr. Res. 2003, 45:219-302.
30. Shewry P.R., Tatham A.S. Disulphide bonds in wheat gluten proteins. J.Cereal Sci. 1997, 25:207-227.
31. Shewry P.R., Tatham A.S., Barro F., Barcelo P., Lazzeri P. Biotechnology of breadmaking: unraveling and manipulating the multi-protein gluten complex. Nat. Biotechnol. 1995, 13:1185-1190.
32. Singh N.K., Shepherd K.W., Cornish G.B. Asimplified SDS-PAGE procedure for separating LMW subunits of glutenin. J.Cereal Sci. 1991, 14:203-208.
33. Wagoner P., Schauer A. Intermediate wheatgrass as a perennial grain crop. Advances in New Crops 1990, 143-145. Timber Press, Portland, OR. J. Janick, J.E. Simon (Eds.).
34. Xu J., Conner R.L. Intravarietal variation in satellites and C-banded chromosomes of Agropyron intermedium ssp. Trichophorum cv. Greenleaf. Genome 1994, 37:305-310.