-
1
-
-
0000663949
-
Detection, assay, and preliminary purification of the pigment controlling photoresponsive development of plants
-
Butler, W. L., Norris, K. H., Siegelman, H. W., and Hendricks, S. B. (1959) Detection, assay, and preliminary purification of the pigment controlling photoresponsive development of plants Proc. Natl. Acad. Sci. U.S.A. 45, 1703-1708
-
(1959)
Proc. Natl. Acad. Sci. U.S.A.
, vol.45
, pp. 1703-1708
-
-
Butler, W.L.1
Norris, K.H.2
Siegelman, H.W.3
Hendricks, S.B.4
-
2
-
-
77953240876
-
Phytochrome three-dimensional structures and functions
-
Hughes, J. (2010) Phytochrome three-dimensional structures and functions Biochem. Soc. Trans. 38, 710-716
-
(2010)
Biochem. Soc. Trans.
, vol.38
, pp. 710-716
-
-
Hughes, J.1
-
3
-
-
77951166118
-
A brief history of phytochromes
-
Rockwell, N. C. and Lagarias, J. C. (2010) A brief history of phytochromes ChemPhysChem 11, 1172-1180
-
(2010)
ChemPhysChem
, vol.11
, pp. 1172-1180
-
-
Rockwell, N.C.1
Lagarias, J.C.2
-
5
-
-
84882359158
-
Unraveling the primary isomerization dynamics in cyanobacterial phytochrome Cph1 with multipulse manipulations
-
Kim, P. W., Rockwell, N. C., Freer, L. H., Chang, C.-W., Martin, S. S., Lagarias, J. C., and Larsen, D. S. (2013) Unraveling the primary isomerization dynamics in cyanobacterial phytochrome Cph1 with multipulse manipulations J. Phys. Chem. Lett. 4, 2605-2609
-
(2013)
J. Phys. Chem. Lett.
, vol.4
, pp. 2605-2609
-
-
Kim, P.W.1
Rockwell, N.C.2
Freer, L.H.3
Chang, C.-W.4
Martin, S.S.5
Lagarias, J.C.6
Larsen, D.S.7
-
6
-
-
79961085471
-
Diverse two-cysteine photocycles in phytochromes and cyanobacteriochromes
-
Rockwell, N. C., Martin, S. S., Feoktistova, K., and Lagarias, J. C. (2011) Diverse two-cysteine photocycles in phytochromes and cyanobacteriochromes Proc. Natl. Acad. Sci. U.S.A. 108, 11854-11859
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, pp. 11854-11859
-
-
Rockwell, N.C.1
Martin, S.S.2
Feoktistova, K.3
Lagarias, J.C.4
-
7
-
-
53749101663
-
Cyanobacteriochromes: A new superfamily of tetrapyrrole-binding photoreceptors in cyanobacteria
-
Ikeuchi, M. and Ishizuka, T. (2008) Cyanobacteriochromes: A new superfamily of tetrapyrrole-binding photoreceptors in cyanobacteria Photochem. Photobiol. Sci. 7, 1159-1167
-
(2008)
Photochem. Photobiol. Sci.
, vol.7
, pp. 1159-1167
-
-
Ikeuchi, M.1
Ishizuka, T.2
-
8
-
-
84859593279
-
Thiol-based photocycle of the blue and teal light-sensing cyanobacteriochrome Tlr1999
-
Enomoto, G., Hirose, Y., Narikawa, R., and Ikeuchi, M. (2012) Thiol-based photocycle of the blue and teal light-sensing cyanobacteriochrome Tlr1999 Biochemistry 51, 3050-3058
-
(2012)
Biochemistry
, vol.51
, pp. 3050-3058
-
-
Enomoto, G.1
Hirose, Y.2
Narikawa, R.3
Ikeuchi, M.4
-
9
-
-
84857406217
-
Phycoviolobilin formation and spectral tuning in the DXCF cyanobacteriochrome subfamily
-
Rockwell, N. C., Martin, S. S., Gulevich, A. G., and Lagarias, J. C. (2012) Phycoviolobilin formation and spectral tuning in the DXCF cyanobacteriochrome subfamily Biochemistry 51, 1449-1463
-
(2012)
Biochemistry
, vol.51
, pp. 1449-1463
-
-
Rockwell, N.C.1
Martin, S.S.2
Gulevich, A.G.3
Lagarias, J.C.4
-
10
-
-
46849086738
-
A second conserved GAF domain cysteine is required for the blue/green photoreversibility of cyanobacteriochrome Tlr0924 from Thermosynechococcus elongatus
-
Rockwell, N. C., Njuguna, S. L., Roberts, L., Castillo, E., Parson, V. L., Dwojak, S., Lagarias, J. C., and Spiller, S. C. (2008) A second conserved GAF domain cysteine is required for the blue/green photoreversibility of cyanobacteriochrome Tlr0924 from Thermosynechococcus elongatus Biochemistry 47, 7304-7316
-
(2008)
Biochemistry
, vol.47
, pp. 7304-7316
-
-
Rockwell, N.C.1
Njuguna, S.L.2
Roberts, L.3
Castillo, E.4
Parson, V.L.5
Dwojak, S.6
Lagarias, J.C.7
Spiller, S.C.8
-
11
-
-
84870531300
-
Red/green cyanobacteriochromes: Sensors of color and power
-
Rockwell, N. C., Martin, S. S., and Lagarias, J. C. (2012) Red/green cyanobacteriochromes: Sensors of color and power Biochemistry 51, 9667-9677
-
(2012)
Biochemistry
, vol.51
, pp. 9667-9677
-
-
Rockwell, N.C.1
Martin, S.S.2
Lagarias, J.C.3
-
12
-
-
84860490821
-
Mechanistic insight into the photosensory versatility of DXCF cyanobacteriochromes
-
Rockwell, N. C., Martin, S. S., and Lagarias, J. C. (2012) Mechanistic insight into the photosensory versatility of DXCF cyanobacteriochromes Biochemistry 51, 3576-3585
-
(2012)
Biochemistry
, vol.51
, pp. 3576-3585
-
-
Rockwell, N.C.1
Martin, S.S.2
Lagarias, J.C.3
-
13
-
-
79851504107
-
The cyanobacteriochrome, TePixJ, isomerizes its own chromophore by converting phycocyanobilin to phycoviolobilin
-
Ishizuka, T., Kamiya, A., Suzuki, H., Narikawa, R., Noguchi, T., Kohchi, T., Inomata, K., and Ikeuchi, M. (2011) The cyanobacteriochrome, TePixJ, isomerizes its own chromophore by converting phycocyanobilin to phycoviolobilin Biochemistry 50, 953-961
-
(2011)
Biochemistry
, vol.50
, pp. 953-961
-
-
Ishizuka, T.1
Kamiya, A.2
Suzuki, H.3
Narikawa, R.4
Noguchi, T.5
Kohchi, T.6
Inomata, K.7
Ikeuchi, M.8
-
14
-
-
70350400736
-
Cyanochromes are blue/green light photoreversible photoreceptors defined by a stable double cysteine linkage to a phycoviolobilin-type chromophore
-
Ulijasz, A. T., Cornilescu, G., von Stetten, D., Cornilescu, C., Escobar, F. V., Zhang, J. R., Stankey, R. J., Rivera, M., Hildebrandt, P., and Vierstra, R. D. (2009) Cyanochromes are blue/green light photoreversible photoreceptors defined by a stable double cysteine linkage to a phycoviolobilin-type chromophore J. Biol. Chem. 284, 29757-29772
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 29757-29772
-
-
Ulijasz, A.T.1
Cornilescu, G.2
Von Stetten, D.3
Cornilescu, C.4
Escobar, F.V.5
Zhang, J.R.6
Stankey, R.J.7
Rivera, M.8
Hildebrandt, P.9
Vierstra, R.D.10
-
15
-
-
84867580557
-
A rising tide of blue-absorbing biliprotein photoreceptors: Characterization of seven such bilin-binding GAF domains in Nostoc sp. PCC7120
-
Ma, Q., Hua, H. H., Chen, Y., Liu, B. B., Kramer, A. L., Scheer, H., Zhao, K. H., and Zhou, M. (2012) A rising tide of blue-absorbing biliprotein photoreceptors: Characterization of seven such bilin-binding GAF domains in Nostoc sp. PCC7120 FEBS J. 279, 4095-4108
-
(2012)
FEBS J.
, vol.279
, pp. 4095-4108
-
-
Ma, Q.1
Hua, H.H.2
Chen, Y.3
Liu, B.B.4
Kramer, A.L.5
Scheer, H.6
Zhao, K.H.7
Zhou, M.8
-
16
-
-
34548792454
-
Cyanobacteriochrome TePixJ of Thermosynechococcus elongatus harbors phycoviolobilin as a chromophore
-
Ishizuka, T., Narikawa, R., Kohchi, T., Katayama, M., and Ikeuchi, M. (2007) Cyanobacteriochrome TePixJ of Thermosynechococcus elongatus harbors phycoviolobilin as a chromophore Plant Cell Physiol. 48, 1385-1390
-
(2007)
Plant Cell Physiol.
, vol.48
, pp. 1385-1390
-
-
Ishizuka, T.1
Narikawa, R.2
Kohchi, T.3
Katayama, M.4
Ikeuchi, M.5
-
17
-
-
79960587148
-
Near-UV cyanobacteriochrome signaling system elicits negative phototaxis in the cyanobacterium Synechocystis sp. PCC 6803
-
Song, J. Y., Cho, H. S., Cho, J. I., Jeon, J. S., Lagarias, J. C., and Park, Y. I. (2011) Near-UV cyanobacteriochrome signaling system elicits negative phototaxis in the cyanobacterium Synechocystis sp. PCC 6803 Proc. Natl. Acad. Sci. U.S.A. 108, 10780-10785
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, pp. 10780-10785
-
-
Song, J.Y.1
Cho, H.S.2
Cho, J.I.3
Jeon, J.S.4
Lagarias, J.C.5
Park, Y.I.6
-
18
-
-
83255165490
-
Novel photosensory two-component system (PixA-NixB-NixC) involved in the regulation of positive and negative phototaxis of cyanobacterium Synechocystis sp. PCC 6803
-
Narikawa, R., Suzuki, F., Yoshihara, S., Higashi, S.-i., Watanabe, M., and Ikeuchi, M. (2011) Novel photosensory two-component system (PixA-NixB-NixC) involved in the regulation of positive and negative phototaxis of cyanobacterium Synechocystis sp. PCC 6803 Plant Cell Physiol. 52, 2214-2224
-
(2011)
Plant Cell Physiol.
, vol.52
, pp. 2214-2224
-
-
Narikawa, R.1
Suzuki, F.2
Yoshihara, S.3
Higashi, S.-I.4
Watanabe, M.5
Ikeuchi, M.6
-
19
-
-
12444323680
-
Cyanobacterial phytochrome-like PixJ1 holoprotein shows novel reversible photoconversion between blue- and green-absorbing forms
-
Yoshihara, S., Katayama, M., Geng, X. X., and Ikeuchi, M. (2004) Cyanobacterial phytochrome-like PixJ1 holoprotein shows novel reversible photoconversion between blue- and green-absorbing forms Plant Cell Physiol. 45, 1729-1737
-
(2004)
Plant Cell Physiol.
, vol.45
, pp. 1729-1737
-
-
Yoshihara, S.1
Katayama, M.2
Geng, X.X.3
Ikeuchi, M.4
-
20
-
-
84865972327
-
Chemical inhomogeneity in the ultrafast dynamics of the DXCF cyanobacteriochrome Tlr0924
-
Freer, L. H., Kim, P. W., Corley, S. C., Rockwell, N. C., Zhao, L., Thibert, A. J., Lagarias, J. C., and Larsen, D. S. (2012) Chemical inhomogeneity in the ultrafast dynamics of the DXCF cyanobacteriochrome Tlr0924 J. Phys. Chem. B 116, 10571-10581
-
(2012)
J. Phys. Chem. B
, vol.116
, pp. 10571-10581
-
-
Freer, L.H.1
Kim, P.W.2
Corley, S.C.3
Rockwell, N.C.4
Zhao, L.5
Thibert, A.J.6
Lagarias, J.C.7
Larsen, D.S.8
-
21
-
-
84872573710
-
Structures of cyanobacteriochromes from phototaxis regulators AnPixJ and TePixJ reveal general and specific photoconversion mechanism
-
Narikawa, R., Ishizuka, T., Muraki, N., Shiba, T., Kurisu, G., and Ikeuchi, M. (2013) Structures of cyanobacteriochromes from phototaxis regulators AnPixJ and TePixJ reveal general and specific photoconversion mechanism Proc. Natl. Acad. Sci. U.S.A. 110, 918-923
-
(2013)
Proc. Natl. Acad. Sci. U.S.A.
, vol.110
, pp. 918-923
-
-
Narikawa, R.1
Ishizuka, T.2
Muraki, N.3
Shiba, T.4
Kurisu, G.5
Ikeuchi, M.6
-
22
-
-
84872126119
-
A photo-labile thioether linkage to phycoviolobilin provides the foundation for the blue/green photocycles in DXCF-cCyanobacteriochromes
-
Burgie, E. S., Walker, J. M., Phillips, G. N., Jr., and Vierstra, R. D. (2013) a photo-labile thioether linkage to phycoviolobilin provides the foundation for the blue/green photocycles in DXCF-cCyanobacteriochromes Structure 21, 88-97
-
(2013)
Structure
, vol.21
, pp. 88-97
-
-
Burgie, E.S.1
Walker, J.M.2
Phillips Jr., G.N.3
Vierstra, R.D.4
-
23
-
-
84878509139
-
H, N, and C chemical shift assignments of cyanobacteriochrome NpF2164g3 in the photoproduct state
-
[Online early access], DOI: 10.1007/s12104-013-9496-0, Published Online: June 9, 2013
-
Lim, S., Rockwell, N. C., Martin, S. S., Lagarias, J. C., and Ames, J. B. (2013) H, N, and C chemical shift assignments of cyanobacteriochrome NpF2164g3 in the photoproduct state. Biomol. NMR Assignments [Online early access], DOI: 10.1007/s12104-013-9496-0, Published Online: June 9, 2013.
-
(2013)
Biomol. NMR Assignments
-
-
Lim, S.1
Rockwell, N.C.2
Martin, S.S.3
Lagarias, J.C.4
Ames, J.B.5
-
24
-
-
84865986049
-
Characterization of cyanobacteriochrome TePixJ from a thermophilic cyanobacterium Thermosynechococcus elongatus strain BP-1
-
Ishizuka, T., Shimada, T., Okajima, K., Yoshihara, S., Ochiai, Y., Katayama, M., and Ikeuchi, M. (2006) Characterization of cyanobacteriochrome TePixJ from a thermophilic cyanobacterium Thermosynechococcus elongatus strain BP-1 Plant Cell Physiol. 47, 1251-1261
-
(2006)
Plant Cell Physiol.
, vol.47
, pp. 1251-1261
-
-
Ishizuka, T.1
Shimada, T.2
Okajima, K.3
Yoshihara, S.4
Ochiai, Y.5
Katayama, M.6
Ikeuchi, M.7
-
25
-
-
84855645629
-
Second-chance forward isomerization dynamics of the red/green cyanobacteriochrome NpR6012g4 from Nostoc punctiforme
-
Kim, P. W., Freer, L. H., Rockwell, N. C., Martin, S. S., Lagarias, J. C., and Larsen, D. S. (2012) Second-chance forward isomerization dynamics of the red/green cyanobacteriochrome NpR6012g4 from Nostoc punctiforme J. Am. Chem. Soc. 134, 130-133
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 130-133
-
-
Kim, P.W.1
Freer, L.H.2
Rockwell, N.C.3
Martin, S.S.4
Lagarias, J.C.5
Larsen, D.S.6
-
26
-
-
84855913595
-
Femtosecond photodynamics of the red/green cyanobacteriochrome NpR6012g4 from Nostoc punctiforme. 1. Forward dynamics
-
Kim, P. W., Freer, L. H., Rockwell, N. C., Martin, S. S., Lagarias, J. C., and Larsen, D. S. (2012) Femtosecond photodynamics of the red/green cyanobacteriochrome NpR6012g4 from Nostoc punctiforme. 1. Forward dynamics Biochemistry 51, 608-618
-
(2012)
Biochemistry
, vol.51
, pp. 608-618
-
-
Kim, P.W.1
Freer, L.H.2
Rockwell, N.C.3
Martin, S.S.4
Lagarias, J.C.5
Larsen, D.S.6
-
27
-
-
84855968782
-
Femtosecond photodynamics of the red/green cyanobacteriochrome NpR6012g4 from Nostoc punctiforme. 2. Reverse dynamics
-
Kim, P. W., Freer, L. H., Rockwell, N. C., Martin, S. S., Lagarias, J. C., and Larsen, D. S. (2012) Femtosecond photodynamics of the red/green cyanobacteriochrome NpR6012g4 from Nostoc punctiforme. 2. Reverse dynamics Biochemistry 51, 619-630
-
(2012)
Biochemistry
, vol.51
, pp. 619-630
-
-
Kim, P.W.1
Freer, L.H.2
Rockwell, N.C.3
Martin, S.S.4
Lagarias, J.C.5
Larsen, D.S.6
-
28
-
-
84884953136
-
Reactive ground-state pathways are not ubiquitous in red/green cyanobacteriochromes
-
Chang, C.-W., Gottlieb, S. M., Kim, P. W., Rockwell, N. C., Lagarias, J. C. L., and Larsen, D. S. (2013) Reactive ground-state pathways are not ubiquitous in red/green cyanobacteriochromes J. Phys. Chem. B 117, 11229-11238
-
(2013)
J. Phys. Chem. B
, vol.117
, pp. 11229-11238
-
-
Chang, C.-W.1
Gottlieb, S.M.2
Kim, P.W.3
Rockwell, N.C.4
Lagarias, J.C.L.5
Larsen, D.S.6
-
29
-
-
84894251103
-
Novel green-red photoreversible cyanobacteriochrome (AnPixJ): Is the chromophore of green-absorbing form identical to that of Pfr of phytochrome?
-
Narikawa, R., Ishizuka, T., Ochiai, Y., Katayama, M., Kohchi, T., and Ikeuchi, M. (2007) Novel green-red photoreversible cyanobacteriochrome (AnPixJ): Is the chromophore of green-absorbing form identical to that of Pfr of phytochrome? Plant Cell Physiol. 48, S102-S102
-
(2007)
Plant Cell Physiol.
, vol.48
-
-
Narikawa, R.1
Ishizuka, T.2
Ochiai, Y.3
Katayama, M.4
Kohchi, T.5
Ikeuchi, M.6
-
30
-
-
79960547313
-
Photoconversion mechanism of a green/red photosensory cyanobacteriochrome AnPixJ: Time-resolved optical spectroscopy and FTIR analysis of the AnPixJ-GAF2 domain
-
Fukushima, Y., Iwaki, M., Narikawa, R., Ikeuchi, M., Tomita, Y., and Itoh, S. (2011) Photoconversion mechanism of a green/red photosensory cyanobacteriochrome AnPixJ: Time-resolved optical spectroscopy and FTIR analysis of the AnPixJ-GAF2 domain Biochemistry 50, 6328-6339
-
(2011)
Biochemistry
, vol.50
, pp. 6328-6339
-
-
Fukushima, Y.1
Iwaki, M.2
Narikawa, R.3
Ikeuchi, M.4
Tomita, Y.5
Itoh, S.6
-
31
-
-
84862121810
-
A flexible light emitting diode-based broadband transient-absorption spectrometer
-
Gottlieb, S. M., Corley, S. C., Madsen, D., and Larsen, D. S. (2012) A flexible light emitting diode-based broadband transient-absorption spectrometer Rev. Sci. Instrum. 83
-
(2012)
Rev. Sci. Instrum.
, pp. 83
-
-
Gottlieb, S.M.1
Corley, S.C.2
Madsen, D.3
Larsen, D.S.4
-
32
-
-
65549125395
-
Distinct classes of red/far-red photochemistry within the phytochrome superfamily
-
Rockwell, N. C., Shang, L., Martin, S. S., and Lagarias, J. C. (2009) Distinct classes of red/far-red photochemistry within the phytochrome superfamily Proc. Natl. Acad. Sci. U.S.A. 106, 6123-6127
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 6123-6127
-
-
Rockwell, N.C.1
Shang, L.2
Martin, S.S.3
Lagarias, J.C.4
-
33
-
-
39849097704
-
Ultrafast carrier dynamics in exfoliated and functionalized calcium niobate nanosheets in water and methanol
-
Carroll, E. C., Compton, O. C., Madsen, D., Osterloh, F. E., and Larsen, D. S. (2008) Ultrafast carrier dynamics in exfoliated and functionalized calcium niobate nanosheets in water and methanol J. Phys. Chem. C 112, 2394-2403
-
(2008)
J. Phys. Chem. C
, vol.112
, pp. 2394-2403
-
-
Carroll, E.C.1
Compton, O.C.2
Madsen, D.3
Osterloh, F.E.4
Larsen, D.S.5
-
34
-
-
84888259743
-
Primary photodynamics of the green/red-absorbing photoswitching regulator of chromatic adaptation e domain from Fremyella diplosiphon
-
Gottlieb, S. M., Kim, P. W., Rockwell, N. C., Hirose, Y., Ikeuchi, M., Lagarias, J. C., and Larsen, D. S. (2013) Primary photodynamics of the green/red-absorbing photoswitching regulator of chromatic adaptation E domain from Fremyella diplosiphon Biochemistry 52, 8198-8208
-
(2013)
Biochemistry
, vol.52
, pp. 8198-8208
-
-
Gottlieb, S.M.1
Kim, P.W.2
Rockwell, N.C.3
Hirose, Y.4
Ikeuchi, M.5
Lagarias, J.C.6
Larsen, D.S.7
-
35
-
-
0002272436
-
Data analysis of time-resolved measurements
-
(Amesz, J. and Hoff, A. J. Eds.) pp, Kluwer Academic Publishers, Dordrecht, The Netherlands
-
Holzwarth, A. R. (1996) Data analysis of time-resolved measurements, In Biophysical Techniques in Photosynthesis (Amesz, J. and Hoff, A. J., Eds.) pp 75-92, Kluwer Academic Publishers, Dordrecht, The Netherlands.
-
(1996)
Biophysical Techniques in Photosynthesis
, pp. 75-92
-
-
Holzwarth, A.R.1
-
36
-
-
3242662628
-
Global and target analysis of time-resolved spectra
-
van Stokkum, I. H. M., Larsen, D. S., and van Grondelle, R. (2004) Global and target analysis of time-resolved spectra Biochim. Biophys. Acta, Bioenerg. 1657, 82-104
-
(2004)
Biochim. Biophys. Acta, Bioenerg.
, vol.1657
, pp. 82-104
-
-
Van Stokkum, I.H.M.1
Larsen, D.S.2
Van Grondelle, R.3
-
37
-
-
84894247647
-
-
Submitted for publication
-
Kim, P. W., Rockwell, N. C., Martin, S. S., Lagarias, J. C., and Larsen, D. S. (2013) Fluoresce or not to fluoresce: Dynamic inhomogeneity in the cyanobacterial phytochrome Cph1. Submitted for publication.
-
(2013)
Fluoresce or Not to Fluoresce: Dynamic Inhomogeneity in the Cyanobacterial Phytochrome Cph1
-
-
Kim, P.W.1
Rockwell, N.C.2
Martin, S.S.3
Lagarias, J.C.4
Larsen, D.S.5
-
38
-
-
84881085900
-
Control of a four-color sensing photoreceptor by a two-color sensing photoreceptor reveals complex light regulation in cyanobacteria
-
Bussell, A. N. and Kehoe, D. M. (2013) Control of a four-color sensing photoreceptor by a two-color sensing photoreceptor reveals complex light regulation in cyanobacteria Proc. Natl. Acad. Sci. U.S.A. 110, 12834-12839
-
(2013)
Proc. Natl. Acad. Sci. U.S.A.
, vol.110
, pp. 12834-12839
-
-
Bussell, A.N.1
Kehoe, D.M.2
|