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Volumn 106, Issue 15, 2009, Pages 6123-6127

Distinct classes of red/far-red photochemistry within the phytochrome superfamily

Author keywords

Bilin amides; Biliprotein; Circular dichroism; Photoisomerization

Indexed keywords

BILIVERDIN; PHYTOCHROME; TETRAPYRROLE DERIVATIVE;

EID: 65549125395     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0902370106     Document Type: Article
Times cited : (120)

References (38)
  • 2
    • 58149261913 scopus 로고    scopus 로고
    • The phytochrome red/far-red photoreceptor superfamily
    • Sharrock RA (2008) The phytochrome red/far-red photoreceptor superfamily. Genome Biol 9:230.
    • (2008) Genome Biol , vol.9 , pp. 230
    • Sharrock, R.A.1
  • 3
    • 10644231202 scopus 로고    scopus 로고
    • The phytochromes: Spectroscopy and function
    • Photoreceptors and Light Signaling, ed Batschauer A Royal Society of Chemistry, Cambridge, UK
    • Gä rtner W, Braslavsky SE (2003) The phytochromes: Spectroscopy and function. Photoreceptors and Light Signaling , Comprehensive Series in Photochemical and Photo-biological Sciences, ed Batschauer A (Royal Society of Chemistry, Cambridge, UK), Vol 3, pp 136-180.
    • (2003) Comprehensive Series in Photochemical and Photo-biological Sciences , vol.3 , pp. 136-180
    • Gä rtner, W.1    Braslavsky, S.E.2
  • 5
    • 0036676141 scopus 로고    scopus 로고
    • Phytochrome ancestry: Sensors of bilins and light
    • Montgomery BL, Lagarias JC (2002) Phytochrome ancestry: Sensors of bilins and light. Trends Plant Sci 7:357-366.
    • (2002) Trends Plant Sci , vol.7 , pp. 357-366
    • Montgomery, B.L.1    Lagarias, J.C.2
  • 6
    • 27844461604 scopus 로고    scopus 로고
    • A light-sensing knot revealed by the structure of the chromophore binding domain of phytochrome
    • Wagner JR, Brunzelle JS, Forest KT, Vierstra RD (2005) A light-sensing knot revealed by the structure of the chromophore binding domain of phytochrome. Nature 438:325-331.
    • (2005) Nature , vol.438 , pp. 325-331
    • Wagner, J.R.1    Brunzelle, J.S.2    Forest, K.T.3    Vierstra, R.D.4
  • 7
    • 4344699140 scopus 로고    scopus 로고
    • Evolution of cyanobacterial and plant phytochromes
    • Lamparter T (2004) Evolution of cyanobacterial and plant phytochromes. FEBS Lett 573:1-5.
    • (2004) FEBS Lett , vol.573 , pp. 1-5
    • Lamparter, T.1
  • 8
    • 34249728355 scopus 로고    scopus 로고
    • High-resolution structure of Deinococcus bacteriophytochrome yields new insights into phytochrome architecture and evolution
    • Wagner JR, Zhang J, Brunzelle JS, Vierstra RD, Forest KT (2007) High-resolution structure of Deinococcus bacteriophytochrome yields new insights into phytochrome architecture and evolution. J Biol Chem 282:12298-12309.
    • (2007) J Biol Chem , vol.282 , pp. 12298-12309
    • Wagner, J.R.1    Zhang, J.2    Brunzelle, J.S.3    Vierstra, R.D.4    Forest, K.T.5
  • 9
    • 0037046559 scopus 로고    scopus 로고
    • Bacteriophytochrome controls photosystem synthesis in anoxy-genic bacteria
    • Giraud E, et al. (2002) Bacteriophytochrome controls photosystem synthesis in anoxy-genic bacteria. Nature 417:202-205.
    • (2002) Nature , vol.417 , pp. 202-205
    • Giraud, E.1
  • 10
    • 0037418282 scopus 로고    scopus 로고
    • The pair of bacteriophytochromes from Agrobacterium tumefaciens are histidine kinases with opposing photobiological properties
    • Karniol B, Vierstra RD (2003) The pair of bacteriophytochromes from Agrobacterium tumefaciens are histidine kinases with opposing photobiological properties. Proc Natl Acad Sci USA 100:2807-2812.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 2807-2812
    • Karniol, B.1    Vierstra, R.D.2
  • 11
    • 17444391234 scopus 로고    scopus 로고
    • Biochemical and spectroscopic characterization of the bacterial phytochrome of Pseudomonas aeruginosa
    • Tasler R, Moises T, Frankenberg-Dinkel N (2005) Biochemical and spectroscopic characterization of the bacterial phytochrome of Pseudomonas aeruginosa. FEBS J 272:1927-1936.
    • (2005) FEBS J , vol.272 , pp. 1927-1936
    • Tasler, R.1    Moises, T.2    Frankenberg-Dinkel, N.3
  • 12
    • 25444438210 scopus 로고    scopus 로고
    • A new type of bacteriophytochrome acts in tandem with a classical bacteriophytochrome to control the antennae synthesis in Rhodopseudomo-nas palustris
    • Giraud E, et al. (2005) A new type of bacteriophytochrome acts in tandem with a classical bacteriophytochrome to control the antennae synthesis in Rhodopseudomo-nas palustris. J Biol Chem 280:32389-32397.
    • (2005) J Biol Chem , vol.280 , pp. 32389-32397
    • Giraud, E.1
  • 13
    • 34147190729 scopus 로고    scopus 로고
    • A singular bacteriophytochrome acquired by lateral gene transfer
    • Jaubert M, et al. (2007) A singular bacteriophytochrome acquired by lateral gene transfer. J Biol Chem 282:7320-7328.
    • (2007) J Biol Chem , vol.282 , pp. 7320-7328
    • Jaubert, M.1
  • 14
    • 0030865349 scopus 로고    scopus 로고
    • A cyanobacterial phytochrome two-component light sensory system
    • Yeh K-C, Wu S-H, Murphy JT, Lagarias JC (1997) A cyanobacterial phytochrome two-component light sensory system. Science 277:1505-1508.
    • (1997) Science , vol.277 , pp. 1505-1508
    • Yeh, K.-C.1    Wu, S.-H.2    Murphy, J.T.3    Lagarias, J.C.4
  • 15
    • 0035856979 scopus 로고    scopus 로고
    • Bacteriophytochromes are photochromic histidine kinases using a biliverdin chromophore
    • Bhoo SH, Davis SJ, Walker J, Karniol B, Vierstra RD (2001) Bacteriophytochromes are photochromic histidine kinases using a biliverdin chromophore. Nature 414:776-779.
    • (2001) Nature , vol.414 , pp. 776-779
    • Bhoo, S.H.1    Davis, S.J.2    Walker, J.3    Karniol, B.4    Vierstra, R.D.5
  • 16
    • 34547628072 scopus 로고    scopus 로고
    • Crystal structure of the chromophore binding domain of an unusual bacteriophytochrome, RpBphP3, reveals residues that modulate photoconversion
    • Yang X, Stojkovic EA, Kuk J, Moffat K (2007) Crystal structure of the chromophore binding domain of an unusual bacteriophytochrome, RpBphP3, reveals residues that modulate photoconversion. Proc Natl Acad Sci USA 104:12571-12576.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 12571-12576
    • Yang, X.1    Stojkovic, E.A.2    Kuk, J.3    Moffat, K.4
  • 17
    • 55749108535 scopus 로고    scopus 로고
    • The structure of a complete phytochrome sensory module in the Pr ground state
    • Essen LO, Mailliet J, Hughes J (2008) The structure of a complete phytochrome sensory module in the Pr ground state. Proc Natl Acad Sci USA 105:14709-14714.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 14709-14714
    • Essen, L.O.1    Mailliet, J.2    Hughes, J.3
  • 18
    • 55749108880 scopus 로고    scopus 로고
    • Crystal structure of Pseudomonas aeruginosa bacte-riophytochrome: Photoconversion and signal transduction
    • Yang X, Kuk J, Moffat K (2008) Crystal structure of Pseudomonas aeruginosa bacte-riophytochrome: Photoconversion and signal transduction. Proc Natl Acad Sci USA 105:14715-14720.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 14715-14720
    • Yang, X.1    Kuk, J.2    Moffat, K.3
  • 19
    • 0025228693 scopus 로고
    • Refined 3-dimensional structure of phycoerythrocyanin from the cyanobacterium Mastigocladus laminosus at 2.7 Å
    • Duerring M, Huber R, Bode W, Ruembeli R, Zuber H (1990) Refined 3-dimensional structure of phycoerythrocyanin from the cyanobacterium Mastigocladus laminosus at 2.7 Å. J Mol Biol 211:633-644.
    • (1990) J Mol Biol , vol.211 , pp. 633-644
    • Duerring, M.1    Huber, R.2    Bode, W.3    Ruembeli, R.4    Zuber, H.5
  • 20
    • 0025967561 scopus 로고
    • Isolation, crystallization, crystal structure analysis, and refinement of constitutive C-phycocyanin from the chromatically adapting cyanobac-terium Fremyella diplosiphon at 1.66-Å resolution
    • Duerring M, Schmidt GB, Huber R (1991) Isolation, crystallization, crystal structure analysis, and refinement of constitutive C-phycocyanin from the chromatically adapting cyanobac-terium Fremyella diplosiphon at 1.66-Å resolution. J Mol Biol 217:577-592.
    • (1991) J Mol Biol , vol.217 , pp. 577-592
    • Duerring, M.1    Schmidt, G.B.2    Huber, R.3
  • 22
    • 46849086738 scopus 로고    scopus 로고
    • A second conserved GAF domain cysteine is required for the blue/green photoreversibility of cyanobacteriochrome Tlr0924 from Thermosynecho-coccus elongatus
    • Rockwell NC, et al. (2008) A second conserved GAF domain cysteine is required for the blue/green photoreversibility of cyanobacteriochrome Tlr0924 from Thermosynecho-coccus elongatus. Biochemistry 47:7304-7316.
    • (2008) Biochemistry , vol.47 , pp. 7304-7316
    • Rockwell, N.C.1
  • 23
    • 0021112551 scopus 로고
    • Structure-function studies on phytochrome: Preliminary characterization of highly purified phytochrome from Avena sativa enriched in the 124-kDa species
    • Litts JC, Kelly JM, Lagarias JC (1983) Structure-function studies on phytochrome: Preliminary characterization of highly purified phytochrome from Avena sativa enriched in the 124-kDa species. J Biol Chem 258:11025-11031.
    • (1983) J Biol Chem , vol.258 , pp. 11025-11031
    • Litts, J.C.1    Kelly, J.M.2    Lagarias, J.C.3
  • 24
    • 0344928455 scopus 로고    scopus 로고
    • Mechanism of Cph1 phytochrome assembly from stopped-flow kinetics and circular dichroism
    • Borucki B, et al. (2003) Mechanism of Cph1 phytochrome assembly from stopped-flow kinetics and circular dichroism. Biochemistry 42:13684-13697.
    • (2003) Biochemistry , vol.42 , pp. 13684-13697
    • Borucki, B.1
  • 25
    • 36049048341 scopus 로고    scopus 로고
    • Locked 5Zs-biliverdin blocks the Meta-Ra to Meta-Rc transition in the functional cycle of bacteriophytochrome Agp1
    • Seibeck S, et al. (2007) Locked 5Zs-biliverdin blocks the Meta-Ra to Meta-Rc transition in the functional cycle of bacteriophytochrome Agp1. FEBS Lett 581:5425-5429.
    • (2007) FEBS Lett , vol.581 , pp. 5425-5429
    • Seibeck, S.1
  • 26
    • 10644265997 scopus 로고    scopus 로고
    • Harnessing phytochrome's glowing potential
    • Fischer AJ, Lagarias JC (2004) Harnessing phytochrome's glowing potential. Proc Natl Acad Sci USA 101:17334-17339.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 17334-17339
    • Fischer, A.J.1    Lagarias, J.C.2
  • 27
    • 27944447344 scopus 로고    scopus 로고
    • Multiple roles of a conserved GAF domain tyrosine residue in cyanobacterial and plant phytochromes
    • Fischer AJ, et al. (2005) Multiple roles of a conserved GAF domain tyrosine residue in cyanobacterial and plant phytochromes. Biochemistry 44:15203-15215.
    • (2005) Biochemistry , vol.44 , pp. 15203-15215
    • Fischer, A.J.1
  • 28
    • 34548309457 scopus 로고    scopus 로고
    • Light-independent phytochrome signaling mediated by dominant GAF domain tyrosine mutants of Arabidopsis phytochromes in transgenic plants
    • Su YS, Lagarias JC (2007) Light-independent phytochrome signaling mediated by dominant GAF domain tyrosine mutants of Arabidopsis phytochromes in transgenic plants. Plant Cell 19:2124-2139.
    • (2007) Plant Cell , vol.19 , pp. 2124-2139
    • Su, Y.S.1    Lagarias, J.C.2
  • 29
    • 45549107695 scopus 로고    scopus 로고
    • Mutational analysis of Deinococcus radiodurans bacteriophy-tochrome reveals key amino acids necessary for the photochromicity and proton exchange cycle of phytochromes
    • Wagner JR, et al. (2008) Mutational analysis of Deinococcus radiodurans bacteriophy-tochrome reveals key amino acids necessary for the photochromicity and proton exchange cycle of phytochromes. J Biol Chem 283:12212-12226.
    • (2008) J Biol Chem , vol.283 , pp. 12212-12226
    • Wagner, J.R.1
  • 30
    • 0028967604 scopus 로고
    • Type I and type II reversible photochemistry of phycoeryth-rocyanin β -subunit from Mastigocladus laminosus both involve Z, E isomerization of phycoviolobilin chromophore and are controlled by sulfhydryls in apoprotein
    • Zhao KH, Scheer H (1995) Type I and type II reversible photochemistry of phycoeryth-rocyanin β -subunit from Mastigocladus laminosus both involve Z, E isomerization of phycoviolobilin chromophore and are controlled by sulfhydryls in apoprotein. Biochim Biophys Acta Bioenerg 1228:244-253.
    • (1995) Biochim Biophys Acta Bioenerg , vol.1228 , pp. 244-253
    • Zhao, K.H.1    Scheer, H.2
  • 31
    • 33846303582 scopus 로고    scopus 로고
    • Structural basis for the photochemistry of β -phycoerythrocyanin
    • Schmidt M, Patel A, Zhao Y, Reuter W (2007) Structural basis for the photochemistry of β -phycoerythrocyanin. Biochemistry 46:416-423.
    • (2007) Biochemistry , vol.46 , pp. 416-423
    • Schmidt, M.1    Patel, A.2    Zhao, Y.3    Reuter, W.4
  • 32
    • 0001285005 scopus 로고
    • Bile pigments: Bilatrienes and 5,15-biladienes
    • ed Dolphin D Academic, New York
    • McDonagh AF (1979) Bile pigments: Bilatrienes and 5,15-biladienes. The Porphyrins , ed Dolphin D (Academic, New York), Vol VI, pp 293-491.
    • (1979) The Porphyrins , vol.6 , pp. 293-491
    • McDonagh, A.F.1
  • 33
    • 0024279594 scopus 로고
    • In vitro attachment of bilins to apophyco-cyanin. I. Specific covalent adduct formation at cysteinyl residues involved in phyco-cyanobilin binding in C-phycocyanin
    • Arciero DM, Bryant DA, Glazer AN (1988) In vitro attachment of bilins to apophyco-cyanin. I. Specific covalent adduct formation at cysteinyl residues involved in phyco-cyanobilin binding in C-phycocyanin. J Biol Chem 263:18343-18349.
    • (1988) J Biol Chem , vol.263 , pp. 18343-18349
    • Arciero, D.M.1    Bryant, D.A.2    Glazer, A.N.3
  • 34
    • 0024961645 scopus 로고
    • Phytochrome chromophore biosynthesis. Treatment of tetrapyrrole-deficient Avena explants with natural and non-natural bilatrienes leads to formation of spectrally active holoproteins
    • Elich TD, McDonagh AF, Palma LA, Lagarias JC (1989) Phytochrome chromophore biosynthesis. Treatment of tetrapyrrole-deficient Avena explants with natural and non-natural bilatrienes leads to formation of spectrally active holoproteins. J Biol Chem 264:183-189.
    • (1989) J Biol Chem , vol.264 , pp. 183-189
    • Elich, T.D.1    McDonagh, A.F.2    Palma, L.A.3    Lagarias, J.C.4
  • 35
    • 0035845489 scopus 로고    scopus 로고
    • Genetic engineering of phytochrome biosynthesis in bacteria
    • Gambetta GA, Lagarias JC (2001) Genetic engineering of phytochrome biosynthesis in bacteria. Proc Natl Acad Sci USA 98:10566-10571.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 10566-10571
    • Gambetta, G.A.1    Lagarias, J.C.2
  • 36
    • 0035845538 scopus 로고    scopus 로고
    • Biosynthesis of a fluorescent cyanobacterial C-phycocyanin holo-β subunit in a heterologous host
    • Tooley AJ, Cai YA, Glazer AN (2001) Biosynthesis of a fluorescent cyanobacterial C-phycocyanin holo-β subunit in a heterologous host. Proc Natl Acad Sci USA 98:10560-10565.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 10560-10565
    • Tooley, A.J.1    Cai, Y.A.2    Glazer, A.N.3
  • 37
    • 84893169025 scopus 로고
    • General atomic and molecular electronic structure system
    • Schmidt MW, et al. (1993) General atomic and molecular electronic structure system. J Comput Chem 14:1347-1363.
    • (1993) J Comput Chem , vol.14 , pp. 1347-1363
    • Schmidt, M.W.1
  • 38
    • 0032216489 scopus 로고    scopus 로고
    • MacMolPlt: A graphical user interface for GAMESS
    • Bode BM, Gordon MS (1998) MacMolPlt: A graphical user interface for GAMESS. J Mol Graphics Model 16:133-138.
    • (1998) J Mol Graphics Model , vol.16 , pp. 133-138
    • Bode, B.M.1    Gordon, M.S.2


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