메뉴 건너뛰기




Volumn 116, Issue 3, 2014, Pages 353-360

Heterologous expression of artificial miRNAs from rice dwarf virus in transgenic rice

Author keywords

Artificial miRNAs (amiRNAs); Copy number; Expression efficiency; osa miRNA528; Rice dwarf virus (RDV)

Indexed keywords

EFFICIENCY; GENES; PLANTS (BOTANY); VIRUSES;

EID: 84894242760     PISSN: 01676857     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11240-013-0410-3     Document Type: Article
Times cited : (4)

References (40)
  • 1
    • 79751484141 scopus 로고    scopus 로고
    • Highly efficient virus resistance mediated by artificial microRNAs that target the suppressor of PVX and PVY in plants
    • doi:10.1111/j.1438-8677.2010.00374.x
    • Ai T, Zhang L, Gao Z, Zhu CX, Guo X (2011) Highly efficient virus resistance mediated by artificial microRNAs that target the suppressor of PVX and PVY in plants. Plant Biol (Stuttg) 13(2): 304-316. doi: 10. 1111/j. 1438-8677. 2010. 00374. x.
    • (2011) Plant Biol (Stuttg) , vol.13 , Issue.2 , pp. 304-316
    • Ai, T.1    Zhang, L.2    Gao, Z.3    Zhu, C.X.4    Guo, X.5
  • 2
    • 33646185558 scopus 로고    scopus 로고
    • Endogenous and synthetic microRNAs stimulate simultaneous, efficient, and localized regulation of multiple targets in diverse species
    • doi:10.1105/tpc.105.040725
    • Alvarez JP, Pekker I, Goldshmidt A, Blum E, Amsellem Z, Eshed Y (2006) Endogenous and synthetic microRNAs stimulate simultaneous, efficient, and localized regulation of multiple targets in diverse species. Plant Cell 18(5): 1134-1151. doi: 10. 1105/tpc. 105. 040725.
    • (2006) Plant Cell , vol.18 , Issue.5 , pp. 1134-1151
    • Alvarez, J.P.1    Pekker, I.2    Goldshmidt, A.3    Blum, E.4    Amsellem, Z.5    Eshed, Y.6
  • 3
    • 0242361521 scopus 로고    scopus 로고
    • Regulation of flowering time and floral organ identity by a microRNA and its APETALA2-like target genes
    • doi:10.1105/tpc.016238
    • Aukerman MJ, Sakai H (2003) Regulation of flowering time and floral organ identity by a microRNA and its APETALA2-like target genes. Plant Cell 15(11): 2730-2741. doi: 10. 1105/tpc. 016238.
    • (2003) Plant Cell , vol.15 , Issue.11 , pp. 2730-2741
    • Aukerman, M.J.1    Sakai, H.2
  • 4
    • 4644242349 scopus 로고    scopus 로고
    • RNA silencing in plants
    • doi:10.1038/nature02874
    • Baulcombe D (2004) RNA silencing in plants. Nature 431(7006): 356-363. doi: 10. 1038/nature02874.
    • (2004) Nature , vol.431 , Issue.7006 , pp. 356-363
    • Baulcombe, D.1
  • 5
    • 77955467234 scopus 로고    scopus 로고
    • Viral miRNAs: tools for immune evasion
    • doi:10.1016/j.mib.2010.05.017
    • Boss IW, Renne R (2010) Viral miRNAs: tools for immune evasion. Curr Opin Microbiol 13(4): 540-545. doi: 10. 1016/j. mib. 2010. 05. 017.
    • (2010) Curr Opin Microbiol , vol.13 , Issue.4 , pp. 540-545
    • Boss, I.W.1    Renne, R.2
  • 7
    • 0038299558 scopus 로고    scopus 로고
    • Role of microRNAs in plant and animal development
    • doi:10.1126/science.1085242
    • Carrington JC, Ambros V (2003) Role of microRNAs in plant and animal development. Science 301(5631): 336-338. doi: 10. 1126/science. 1085242.
    • (2003) Science , vol.301 , Issue.5631 , pp. 336-338
    • Carrington, J.C.1    Ambros, V.2
  • 8
    • 80052339278 scopus 로고    scopus 로고
    • Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors
    • doi:10.1371/journal.ppat.1002176
    • Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y (2011) Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors. PLoS Pathog 7(8): e1002176. doi: 10. 1371/journal. ppat. 1002176.
    • (2011) PLoS Pathog , vol.7 , Issue.8
    • Du, P.1    Wu, J.2    Zhang, J.3    Zhao, S.4    Zheng, H.5    Gao, G.6    Wei, L.7    Li, Y.8
  • 9
    • 0025978277 scopus 로고
    • A simple and rapid method for the preparation of plant genomic DNA for pcr analysis
    • doi:10.1093/nar/19.6.1349
    • Edwards K, Johnstone C, Thompson C (1991) A simple and rapid method for the preparation of plant genomic DNA for pcr analysis. Nucleic Acids Res 19(6): 1349. doi: 10. 1093/nar/19. 6. 1349.
    • (1991) Nucleic Acids Res , vol.19 , Issue.6 , pp. 1349
    • Edwards, K.1    Johnstone, C.2    Thompson, C.3
  • 10
    • 22144489833 scopus 로고    scopus 로고
    • RNAi: the nuts and bolts of the RISC machine
    • doi:10.1016/j.cell.2005.06.023
    • Filipowicz W (2005) RNAi: the nuts and bolts of the RISC machine. Cell 122(1): 17-20. doi: 10. 1016/j. cell. 2005. 06. 023.
    • (2005) Cell , vol.122 , Issue.1 , pp. 17-20
    • Filipowicz, W.1
  • 11
    • 0346121436 scopus 로고    scopus 로고
    • The small RNA world
    • doi:10.1242/jcs.00838
    • Finnegan EJ, Matzke MA (2003) The small RNA world. J Cell Sci 116(Pt 23): 4689-4693. doi: 10. 1242/jcs. 00838.
    • (2003) J Cell Sci , vol.116 , Issue.Pt 23 , pp. 4689-4693
    • Finnegan, E.J.1    Matzke, M.A.2
  • 12
    • 33750889644 scopus 로고    scopus 로고
    • A micropunch against plant viruses
    • doi:10.1038/nbt1106-1358
    • Garcia JA, Simon-Mateo C (2006) A micropunch against plant viruses. Nat Biotechnol 24(11): 1358-1359. doi: 10. 1038/nbt1106-1358.
    • (2006) Nat Biotechnol , vol.24 , Issue.11 , pp. 1358-1359
    • Garcia, J.A.1    Simon-Mateo, C.2
  • 13
    • 0028483231 scopus 로고
    • Efficient transformation of rice (Oryza sativa L) mediated by agrobacterium and sequence-analysis of the boundaries of the T-DNA
    • doi:10.1046/j.1365-313X.1994.6020271.x
    • Hiei Y, Ohta S, Komari T, Kumashiro T (1994) Efficient transformation of rice (Oryza sativa L) mediated by agrobacterium and sequence-analysis of the boundaries of the T-DNA. Plant J 6(2): 271-282. doi: 10. 1046/j. 1365-313X. 1994. 6020271. x.
    • (1994) Plant J , vol.6 , Issue.2 , pp. 271-282
    • Hiei, Y.1    Ohta, S.2    Komari, T.3    Kumashiro, T.4
  • 15
    • 84856554181 scopus 로고    scopus 로고
    • RNA-dependent RNA polymerase 6 of rice (Oryza sativa) plays role in host defense against negative-strand RNA virus
    • doi:10.1016/j.virusres.2011.11.016
    • Jiang L, Qian D, Zheng H, Meng LY, Chen J, Le WJ, Zhou T, Zhou YJ, Wei CH, Li Y (2012) RNA-dependent RNA polymerase 6 of rice (Oryza sativa) plays role in host defense against negative-strand RNA virus. Rice stripe virus. Virus Res 163(2): 512-519. doi: 10. 1016/j. virusres. 2011. 11. 016.
    • (2012) Rice Stripe Virus. Virus Res , vol.163 , Issue.2 , pp. 512-519
    • Jiang, L.1    Qian, D.2    Zheng, H.3    Meng, L.Y.4    Chen, J.5    Le, W.J.6    Zhou, T.7    Zhou, Y.J.8    Wei, C.H.9    Li, Y.10
  • 16
    • 79961145380 scopus 로고    scopus 로고
    • Gene function analysis by artificial microRNAs in Physcomitrella patens
    • doi:10.1007/978-1-61779-123-9_5
    • Khraiwesh B, Fattash I, Arif MA, Frank W (2011) Gene function analysis by artificial microRNAs in Physcomitrella patens. Methods Mol Biol 744: 57-79. doi: 10. 1007/978-1-61779-123-9_5.
    • (2011) Methods Mol Biol , vol.744 , pp. 57-79
    • Khraiwesh, B.1    Fattash, I.2    Arif, M.A.3    Frank, W.4
  • 17
    • 18344369543 scopus 로고    scopus 로고
    • MicroRNA biogenesis: coordinated cropping and dicing
    • doi:10.1038/nrm1644
    • Kim VN (2005) MicroRNA biogenesis: coordinated cropping and dicing. Nat Rev Mol Cell Biol 6(5): 376-385. doi: 10. 1038/nrm1644.
    • (2005) Nat Rev Mol Cell Biol , vol.6 , Issue.5 , pp. 376-385
    • Kim, V.N.1
  • 18
    • 84857624362 scopus 로고    scopus 로고
    • Multiple artificial microRNAs targeting conserved motifs of the replicase gene confer robust transgenic resistance to negative-sense single-stranded RNA plant virus
    • doi:10.1111/j.1364-3703.2011.00747.x
    • Kung YJ, Lin SS, Huang YL, Chen TC, Harish SS, Chua NH, Yeh SD (2012) Multiple artificial microRNAs targeting conserved motifs of the replicase gene confer robust transgenic resistance to negative-sense single-stranded RNA plant virus. Mol Plant Pathol 13(3): 303-317. doi: 10. 1111/j. 1364-3703. 2011. 00747. x.
    • (2012) Mol Plant Pathol , vol.13 , Issue.3 , pp. 303-317
    • Kung, Y.J.1    Lin, S.S.2    Huang, Y.L.3    Chen, T.C.4    Harish, S.S.5    Chua, N.H.6    Yeh, S.D.7
  • 19
    • 0344232733 scopus 로고    scopus 로고
    • microRNAs: runts of the genome assert themselves
    • doi:10.1016/j.cub.2003.11.017
    • Lai EC (2003) microRNAs: runts of the genome assert themselves. Curr Biol 13(23): R925-R936. doi: 10. 1016/j. cub. 2003. 11. 017.
    • (2003) Curr Biol , vol.13 , Issue.23
    • Lai, E.C.1
  • 20
    • 0038387656 scopus 로고    scopus 로고
    • Virus-induced gene silencing in plants
    • doi:10.1016/j.cub.2003.11.017
    • Lu R, Martin-Hernandez AM, Peart JR, Malcuit I, Baulcombe DC (2003) Virus-induced gene silencing in plants. Methods 30(4): 296-303. doi: 10. 1016/j. cub. 2003. 11. 017.
    • (2003) Methods , vol.30 , Issue.4 , pp. 296-303
    • Lu, R.1    Martin-Hernandez, A.M.2    Peart, J.R.3    Malcuit, I.4    Baulcombe, D.C.5
  • 21
  • 22
    • 63349090914 scopus 로고    scopus 로고
    • Highly specific gene silencing by artificial microRNAs in the unicellular alga Chlamydomonas reinhardtii
    • doi:10.1111/j.1365-313X.2008.03767.x
    • Molnar A, Bassett A, Thuenemann E, Schwach F, Karkare S, Ossowski S, Weigel D, Baulcombe D (2009) Highly specific gene silencing by artificial microRNAs in the unicellular alga Chlamydomonas reinhardtii. Plant J 58(1): 165-174. doi: 10. 1111/j. 1365-313X. 2008. 03767. x.
    • (2009) Plant J , vol.58 , Issue.1 , pp. 165-174
    • Molnar, A.1    Bassett, A.2    Thuenemann, E.3    Schwach, F.4    Karkare, S.5    Ossowski, S.6    Weigel, D.7    Baulcombe, D.8
  • 23
    • 33750853059 scopus 로고    scopus 로고
    • Expression of artificial microRNAs in transgenic Arabidopsis thaliana confers virus resistance
    • doi:10.1038/nbt1255
    • Niu QW, Lin SS, Reyes JL, Chen KC, Wu HW, Yeh SD, Chua NH (2006) Expression of artificial microRNAs in transgenic Arabidopsis thaliana confers virus resistance. Nat Biotechnol 24(11): 1420-1428. doi: 10. 1038/nbt1255.
    • (2006) Nat Biotechnol , vol.24 , Issue.11 , pp. 1420-1428
    • Niu, Q.W.1    Lin, S.S.2    Reyes, J.L.3    Chen, K.C.4    Wu, H.W.5    Yeh, S.D.6    Chua, N.H.7
  • 24
    • 38949151063 scopus 로고    scopus 로고
    • Gene silencing in plants using artificial microRNAs and other small RNAs
    • doi:10.1111/j.1365-313X.2007.03328.x
    • Ossowski S, Schwab R, Weigel D (2008) Gene silencing in plants using artificial microRNAs and other small RNAs. Plant J 53(4): 674-690. doi: 10. 1111/j. 1365-313X. 2007. 03328. x.
    • (2008) Plant J , vol.53 , Issue.4 , pp. 674-690
    • Ossowski, S.1    Schwab, R.2    Weigel, D.3
  • 25
    • 61449254293 scopus 로고    scopus 로고
    • Highly efficient gene silencing using perfect complementary artificial miRNA targeting AP1 or heteromeric artificial miRNA targeting AP1 and CAL genes
    • doi:10.1007/s00299-008-0651-5
    • Park W, Zhai J, Lee JY (2009) Highly efficient gene silencing using perfect complementary artificial miRNA targeting AP1 or heteromeric artificial miRNA targeting AP1 and CAL genes. Plant Cell Rep 28(3): 469-480. doi: 10. 1007/s00299-008-0651-5.
    • (2009) Plant Cell Rep , vol.28 , Issue.3 , pp. 469-480
    • Park, W.1    Zhai, J.2    Lee, J.Y.3
  • 26
    • 70349556320 scopus 로고    scopus 로고
    • Regulation and functional specialization of small RNA-target nodes during plant development
    • doi:10.1016/j.pbi.2009.07.003
    • Rubio-Somoza I, Cuperus JT, Weigel D, Carrington JC (2009) Regulation and functional specialization of small RNA-target nodes during plant development. Curr Opin Plant Biol 12(5): 622-627. doi: 10. 1016/j. pbi. 2009. 07. 003.
    • (2009) Curr Opin Plant Biol , vol.12 , Issue.5 , pp. 622-627
    • Rubio-Somoza, I.1    Cuperus, J.T.2    Weigel, D.3    Carrington, J.C.4
  • 27
    • 67651036643 scopus 로고    scopus 로고
    • Roles of plant small RNAs in biotic stress responses
    • doi:10.1146/annurev.arplant.043008.092111
    • Ruiz-Ferrer V, Voinnet O (2009) Roles of plant small RNAs in biotic stress responses. Annu Rev Plant Biol 60: 485-510. doi: 10. 1146/annurev. arplant. 043008. 092111.
    • (2009) Annu Rev Plant Biol , vol.60 , pp. 485-510
    • Ruiz-Ferrer, V.1    Voinnet, O.2
  • 28
    • 79952738184 scopus 로고    scopus 로고
    • Artificial microRNAs (amiRNAs) engineering: on how microRNA-based silencing methods have affected current plant silencing research
    • doi:10.1016/j.bbrc.2011.02.045
    • Sablok G, Perez-Quintero AL, Hassan M, Tatarinova TV, Lopez C (2011) Artificial microRNAs (amiRNAs) engineering: on how microRNA-based silencing methods have affected current plant silencing research. Biochem Biophys Res Commun 406(3): 315-319. doi: 10. 1016/j. bbrc. 2011. 02. 045.
    • (2011) Biochem Biophys Res Commun , vol.406 , Issue.3 , pp. 315-319
    • Sablok, G.1    Perez-Quintero, A.L.2    Hassan, M.3    Tatarinova, T.V.4    Lopez, C.5
  • 29
    • 33745393624 scopus 로고    scopus 로고
    • Highly specific gene silencing by artificial microRNAs in Arabidopsis
    • doi:10.1105/tpc.105.039834
    • Schwab R, Ossowski S, Riester M, Warthmann N, Weigel D (2006) Highly specific gene silencing by artificial microRNAs in Arabidopsis. Plant Cell 18(5): 1121-1133. doi: 10. 1105/tpc. 105. 039834.
    • (2006) Plant Cell , vol.18 , Issue.5 , pp. 1121-1133
    • Schwab, R.1    Ossowski, S.2    Riester, M.3    Warthmann, N.4    Weigel, D.5
  • 30
    • 80655127842 scopus 로고    scopus 로고
    • Antiviral strategies in plants based on RNA silencing
    • doi:10.1016/j.bbagrm.2011.05.011
    • Simon-Mateo C, Garcia JA (2011) Antiviral strategies in plants based on RNA silencing. Biochim Biophys Acta 1809(11-12): 722-731. doi: 10. 1016/j. bbagrm. 2011. 05. 011.
    • (2011) Biochim Biophys Acta , vol.1809 , Issue.11-12 , pp. 722-731
    • Simon-Mateo, C.1    Garcia, J.A.2
  • 31
    • 14344252157 scopus 로고    scopus 로고
    • Induction and suppression of RNA silencing: insights from viral infections
    • doi:10.1038/nrg1555
    • Voinnet O (2005) Induction and suppression of RNA silencing: insights from viral infections. Nat Rev Genet 6(3): 206-220. doi: 10. 1038/nrg1555.
    • (2005) Nat Rev Genet , vol.6 , Issue.3 , pp. 206-220
    • Voinnet, O.1
  • 32
    • 46649106719 scopus 로고    scopus 로고
    • Highly specific gene silencing by artificial miRNAs in rice
    • doi:10.1371/journal.pone.0001829
    • Warthmann N, Chen H, Ossowski S, Weigel D, Herve P (2008) Highly specific gene silencing by artificial miRNAs in rice. PLoS ONE 3(3): e1829. doi: 10. 1371/journal. pone. 0001829.
    • (2008) PLoS ONE , vol.3 , Issue.3
    • Warthmann, N.1    Chen, H.2    Ossowski, S.3    Weigel, D.4    Herve, P.5
  • 33
    • 26944438331 scopus 로고    scopus 로고
    • RNA silencing platforms in plants
    • doi:10.1016/j.febslet.2005.08.014
    • Watson JM, Fusaro AF, Wang M, Waterhouse PM (2005) RNA silencing platforms in plants. FEBS Lett 579(26): 5982-5987. doi: 10. 1016/j. febslet. 2005. 08. 014.
    • (2005) FEBS Lett , vol.579 , Issue.26 , pp. 5982-5987
    • Watson, J.M.1    Fusaro, A.F.2    Wang, M.3    Waterhouse, P.M.4
  • 34
    • 79955743820 scopus 로고    scopus 로고
    • Identification of a novel marine fish virus, Singapore grouper iridovirus-encoded microRNAs expressed in grouper cells by Solexa sequencing
    • doi:10.1371/journal.pone.0019148
    • Yan Y, Cui H, Jiang S, Huang Y, Huang X, Wei S, Xu W, Qin Q (2011) Identification of a novel marine fish virus, Singapore grouper iridovirus-encoded microRNAs expressed in grouper cells by Solexa sequencing. PLoS ONE 6(4): e19148. doi: 10. 1371/journal. pone. 0019148.
    • (2011) PLoS ONE , vol.6 , Issue.4
    • Yan, Y.1    Cui, H.2    Jiang, S.3    Huang, Y.4    Huang, X.5    Wei, S.6    Xu, W.7    Qin, Q.8
  • 35
    • 24644446398 scopus 로고    scopus 로고
    • Ribo-gnome: the big world of small RNAs
    • doi:10.1126/science.1111444
    • Zamore PD, Haley B (2005) Ribo-gnome: the big world of small RNAs. Science 309(5740): 1519-1524. doi: 10. 1126/science. 1111444.
    • (2005) Science , vol.309 , Issue.5740 , pp. 1519-1524
    • Zamore, P.D.1    Haley, B.2
  • 36
    • 0036294527 scopus 로고    scopus 로고
    • Both natural and designed micro RNAs can inhibit the expression of cognate mRNAs when expressed in human cells
    • doi:10.1016/s1097-2765(02)00541-5
    • Zeng Y, Wagner EJ, Cullen BR (2002) Both natural and designed micro RNAs can inhibit the expression of cognate mRNAs when expressed in human cells. Mol Cell 9(6): 1327-1333. doi: 10. 1016/s1097-2765(02)00541-5.
    • (2002) Mol Cell , vol.9 , Issue.6 , pp. 1327-1333
    • Zeng, Y.1    Wagner, E.J.2    Cullen, B.R.3
  • 37
    • 42649112041 scopus 로고    scopus 로고
    • Contrasting effects of HC-Pro and 2b viral suppressors from Sugarcane mosaic virus and Tomato aspermy cucumovirus on the accumulation of siRNAs
    • doi:10.1016/j.virol.2007.12.045
    • Zhang X, Du P, Lu L, Xiao Q, Wang W, Cao X, Ren B, Wei C, Li Y (2008) Contrasting effects of HC-Pro and 2b viral suppressors from Sugarcane mosaic virus and Tomato aspermy cucumovirus on the accumulation of siRNAs. Virology 374(2): 351-360. doi: 10. 1016/j. virol. 2007. 12. 045.
    • (2008) Virology , vol.374 , Issue.2 , pp. 351-360
    • Zhang, X.1    Du, P.2    Lu, L.3    Xiao, Q.4    Wang, W.5    Cao, X.6    Ren, B.7    Wei, C.8    Li, Y.9
  • 38
    • 79960039978 scopus 로고    scopus 로고
    • Progress in RNAi-based antiviral therapeutics
    • doi:10.1007/978-1-61779-037-9_4
    • Zhou J, Rossi JJ (2011) Progress in RNAi-based antiviral therapeutics. Methods Mol Biol 721: 67-75. doi: 10. 1007/978-1-61779-037-9_4.
    • (2011) Methods Mol Biol , vol.721 , pp. 67-75
    • Zhou, J.1    Rossi, J.J.2
  • 39
    • 37649002522 scopus 로고    scopus 로고
    • The P2 capsid protein of the nonenveloped rice dwarf phytoreovirus induces membrane fusion in insect host cells
    • doi:10.1073/pnas.0708946104
    • Zhou F, Pu Y, Wei T, Liu H, Deng W, Wei C, Ding B, Omura T, Li Y (2007) The P2 capsid protein of the nonenveloped rice dwarf phytoreovirus induces membrane fusion in insect host cells. Proc Natl Acad Sci U S A 104(49): 19547-19552. doi: 10. 1073/pnas. 0708946104.
    • (2007) Proc Natl Acad Sci U S A , vol.104 , Issue.49 , pp. 19547-19552
    • Zhou, F.1    Pu, Y.2    Wei, T.3    Liu, H.4    Deng, W.5    Wei, C.6    Ding, B.7    Omura, T.8    Li, Y.9
  • 40
    • 33645011990 scopus 로고    scopus 로고
    • The rice dwarf virus P2 protein interacts with ent-kaurene oxidases in vivo, leading to reduced biosynthesis of gibberellins and rice dwarf symptoms
    • doi:10.1104/pp.105.072306
    • Zhu S, Gao F, Cao X, Chen M, Ye G, Wei C, Li Y (2005) The rice dwarf virus P2 protein interacts with ent-kaurene oxidases in vivo, leading to reduced biosynthesis of gibberellins and rice dwarf symptoms. Plant Physiol 139(4): 1935-1945. doi: 10. 1104/pp. 105. 072306.
    • (2005) Plant Physiol , vol.139 , Issue.4 , pp. 1935-1945
    • Zhu, S.1    Gao, F.2    Cao, X.3    Chen, M.4    Ye, G.5    Wei, C.6    Li, Y.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.