메뉴 건너뛰기




Volumn 3, Issue 3, 2008, Pages

Highly specific gene silencing by artificial miRNAs in rice

Author keywords

[No Author keywords available]

Indexed keywords

ELONGATED UPPERMOST INTERNODE 1 PROTEIN; MICRORNA; PHYTOENE DESATURASE; SPOTTED LEAF 11 PROTEIN; VEGETABLE PROTEIN;

EID: 46649106719     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0001829     Document Type: Article
Times cited : (301)

References (46)
  • 1
    • 34247614065 scopus 로고    scopus 로고
    • A QTL for rice grain width and weight encodes a previously unknown RING-type E3 ubiquitin ligase
    • Song XJ, Huang W, Shi M, Zhu MZ, Lin HX (2007) A QTL for rice grain width and weight encodes a previously unknown RING-type E3 ubiquitin ligase. Nat Genet 39: 623-630.
    • (2007) Nat Genet , vol.39 , pp. 623-630
    • Song, X.J.1    Huang, W.2    Shi, M.3    Zhu, M.Z.4    Lin, H.X.5
  • 2
    • 33750853059 scopus 로고    scopus 로고
    • Expression of artificial microRNAs in transgenic Arabidopsis thaliana confers virus resistance
    • Niu QW, Lin SS, Reyes JL, Chen KC, Wu HW, et al. (2006) Expression of artificial microRNAs in transgenic Arabidopsis thaliana confers virus resistance. Nat Biotechnol 24: 1420-1428.
    • (2006) Nat Biotechnol , vol.24 , pp. 1420-1428
    • Niu, Q.W.1    Lin, S.S.2    Reyes, J.L.3    Chen, K.C.4    Wu, H.W.5
  • 4
  • 5
    • 0037173012 scopus 로고    scopus 로고
    • Semidwarf (sd-l), "green revolution" rice, contains a defective gibberellin 20-oxidase gene
    • Spielmeyer W, Ellis MH, Chandler PM (2002) Semidwarf (sd-l), "green revolution" rice, contains a defective gibberellin 20-oxidase gene. Proc Natl Acad Sci USA 99: 9043-9048.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 9043-9048
    • Spielmeyer, W.1    Ellis, M.H.2    Chandler, P.M.3
  • 6
    • 33947276163 scopus 로고    scopus 로고
    • Genetic and molecular analysis of utility of sdl alleles in rice breeding
    • Asano K, Takashi T, Miura K, Qian Q, Kitano H, et al. (2007) Genetic and molecular analysis of utility of sdl alleles in rice breeding. Breed Sci 57: 53-58.
    • (2007) Breed Sci , vol.57 , pp. 53-58
    • Asano, K.1    Takashi, T.2    Miura, K.3    Qian, Q.4    Kitano, H.5
  • 7
    • 33644903254 scopus 로고    scopus 로고
    • EU11, encoding a putative cytochrome P450 monooxygenase, regulates internode elongation by modulating gibberellin responses in rice
    • Luo A, Qian Q, Yin H, Liu X, Yin C, et al. (2006) EU11, encoding a putative cytochrome P450 monooxygenase, regulates internode elongation by modulating gibberellin responses in rice. Plant Cell Physiol 47: 181-191.
    • (2006) Plant Cell Physiol , vol.47 , pp. 181-191
    • Luo, A.1    Qian, Q.2    Yin, H.3    Liu, X.4    Yin, C.5
  • 8
    • 33645949148 scopus 로고    scopus 로고
    • ELONGATED UPPERMOST INTERNODE encodes a cytochrome P450 monooxygenase that epoxidizes gibberellins in a novel deactivation reaction in rice
    • Zhu Y, Nomura T, Xu Y, Zhang Y, Peng Y, et al. (2006) ELONGATED UPPERMOST INTERNODE encodes a cytochrome P450 monooxygenase that epoxidizes gibberellins in a novel deactivation reaction in rice. Plant Cell 18: 442-456.
    • (2006) Plant Cell , vol.18 , pp. 442-456
    • Zhu, Y.1    Nomura, T.2    Xu, Y.3    Zhang, Y.4    Peng, Y.5
  • 9
    • 46649099459 scopus 로고    scopus 로고
    • Registration of Guichao 2 eui rice genetic stock
    • Rutger JN (2005) Registration of Guichao 2 eui rice genetic stock. Crop Sci 45: 433.
    • (2005) Crop Sci , vol.45 , pp. 433
    • Rutger, J.N.1
  • 10
    • 1842815204 scopus 로고    scopus 로고
    • RNA interference in crop plants
    • Kusaba M (2004) RNA interference in crop plants. Curr Opin Biotechnol 15: 139-143.
    • (2004) Curr Opin Biotechnol , vol.15 , pp. 139-143
    • Kusaba, M.1
  • 11
    • 34247176129 scopus 로고    scopus 로고
    • RNAi for revealing and engineering plant gene functions
    • Small I (2007) RNAi for revealing and engineering plant gene functions. Curr Opin Biotechnol 18: 148-153.
    • (2007) Curr Opin Biotechnol , vol.18 , pp. 148-153
    • Small, I.1
  • 12
    • 34748836500 scopus 로고    scopus 로고
    • RNAi and microRNA: Breakthrough technologies for the improvement of plant nutritional value and metabolic engineering
    • Tang G, Galili G, Zhuang X (2007) RNAi and microRNA: breakthrough technologies for the improvement of plant nutritional value and metabolic engineering. Metabolomics 3: 357-369.
    • (2007) Metabolomics , vol.3 , pp. 357-369
    • Tang, G.1    Galili, G.2    Zhuang, X.3
  • 13
    • 34249951149 scopus 로고    scopus 로고
    • Artificial miRNA-mediated virus resistance in plants
    • Qu J, Ye J, Fang R (2007) Artificial miRNA-mediated virus resistance in plants. J Virol 81: 6690-6699.
    • (2007) J Virol , vol.81 , pp. 6690-6699
    • Qu, J.1    Ye, J.2    Fang, R.3
  • 15
    • 35948967593 scopus 로고    scopus 로고
    • Silencing a cotton bollworm P450 moncoxygenase gene by plant-mediated RNAi impairs larval tolerance of gossypol
    • Mao YB, Cai WJ, Wang JW, Hong GJ, Tao XY, et al. (2007) Silencing a cotton bollworm P450 moncoxygenase gene by plant-mediated RNAi impairs larval tolerance of gossypol. Nat Biotechnol 25: 1307-1313.
    • (2007) Nat Biotechnol , vol.25 , pp. 1307-1313
    • Mao, Y.B.1    Cai, W.J.2    Wang, J.W.3    Hong, G.J.4    Tao, X.Y.5
  • 17
    • 33746556993 scopus 로고    scopus 로고
    • A brief history of RNAi: The silence of the genes
    • Sen GL, Blau HM (2006) A brief history of RNAi: the silence of the genes. FASEB J 20: 1293-1299.
    • (2006) FASEB J , vol.20 , pp. 1293-1299
    • Sen, G.L.1    Blau, H.M.2
  • 18
    • 0034800385 scopus 로고    scopus 로고
    • Construct design for efficient, effective and high-throughput gene silencing in plants
    • Wesley SV, Helliwell CA, Smith NA, Wang MB, Rouse DT, et al. (2001) Construct design for efficient, effective and high-throughput gene silencing in plants. Plant J 27: 581-590.
    • (2001) Plant J , vol.27 , pp. 581-590
    • Wesley, S.V.1    Helliwell, C.A.2    Smith, N.A.3    Wang, M.B.4    Rouse, D.T.5
  • 19
    • 0034712919 scopus 로고    scopus 로고
    • Specific and heritable genetic interference by double-stranded RNA in Arabidopsis thaliana
    • Chuang CF, Meyerowitz EM (2000) Specific and heritable genetic interference by double-stranded RNA in Arabidopsis thaliana. Proc Natl Acad Sci USA 97: 4985-4990.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 4985-4990
    • Chuang, C.F.1    Meyerowitz, E.M.2
  • 20
    • 33750061917 scopus 로고    scopus 로고
    • Computational estimation and experimental verification of off-target silencing during posttranscriptional gene silencing in plants
    • Xu P, Zhang Y, Kang L, Roossinck MJ, Mysore KS (2006) Computational estimation and experimental verification of off-target silencing during posttranscriptional gene silencing in plants. Plant Physiol 142: 429-440.
    • (2006) Plant Physiol , vol.142 , pp. 429-440
    • Xu, P.1    Zhang, Y.2    Kang, L.3    Roossinck, M.J.4    Mysore, K.S.5
  • 21
    • 33745393624 scopus 로고    scopus 로고
    • Highly specific gene silencing by artificial microRNAs in Arabidopsis
    • Schwab R, Ossowski S, Riester M, Warthmann N, Weigel D (2006) Highly specific gene silencing by artificial microRNAs in Arabidopsis. Plant Cell 18: 1121-1133.
    • (2006) Plant Cell , vol.18 , pp. 1121-1133
    • Schwab, R.1    Ossowski, S.2    Riester, M.3    Warthmann, N.4    Weigel, D.5
  • 22
    • 33646185558 scopus 로고    scopus 로고
    • Endogenous and synthetic microRNAs stimulate simultaneous, efficient, and localized regulation of multiple targets in diverse species
    • Alvarez JP, Pekker I, Goldshmidt A, Blum E, Amsellem Z, et al. (2006) Endogenous and synthetic microRNAs stimulate simultaneous, efficient, and localized regulation of multiple targets in diverse species. Plant Cell 18: 1134-1151.
    • (2006) Plant Cell , vol.18 , pp. 1134-1151
    • Alvarez, J.P.1    Pekker, I.2    Goldshmidt, A.3    Blum, E.4    Amsellem, Z.5
  • 23
    • 4444234497 scopus 로고    scopus 로고
    • In vivo investigation of the transcription, processing, endonucleolytic activity, and functional relevance of the spatial distribution of a plant miRNA
    • Parizotto EA, Dunoyer P, Rahm N, Himber C, Voinnet O (2004) In vivo investigation of the transcription, processing, endonucleolytic activity, and functional relevance of the spatial distribution of a plant miRNA. Genes Dev 18: 2237-2242.
    • (2004) Genes Dev , vol.18 , pp. 2237-2242
    • Parizotto, E.A.1    Dunoyer, P.2    Rahm, N.3    Himber, C.4    Voinnet, O.5
  • 24
    • 0036294527 scopus 로고    scopus 로고
    • Both natural and designed micro RNAs can inhibit die expression of cognate mRNAs when expressed in human cells
    • Zeng Y, Wagner EJ, Cullen BR (2002) Both natural and designed micro RNAs can inhibit die expression of cognate mRNAs when expressed in human cells. Mol Cell 9: 1327-1333.
    • (2002) Mol Cell , vol.9 , pp. 1327-1333
    • Zeng, Y.1    Wagner, E.J.2    Cullen, B.R.3
  • 25
    • 38949151063 scopus 로고    scopus 로고
    • Gene silencing in plants using artificial microRNAs and other small RNAs
    • Ossowski S, Schwab I, Weigel D (2008) Gene silencing in plants using artificial microRNAs and other small RNAs. Plant J 53: 674-690.
    • (2008) Plant J , vol.53 , pp. 674-690
    • Ossowski, S.1    Schwab, I.2    Weigel, D.3
  • 26
    • 0037144457 scopus 로고    scopus 로고
    • Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA
    • Llave C, Xie Z, Kasschau KD, Carrington JC (2002) Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA. Science 297: 2053-2056.
    • (2002) Science , vol.297 , pp. 2053-2056
    • Llave, C.1    Xie, Z.2    Kasschau, K.D.3    Carrington, J.C.4
  • 28
    • 2342577446 scopus 로고    scopus 로고
    • Simple RNAi vectors for stable and transient suppression of gene function in rice
    • Miki D, Shimamoto K (2004) Simple RNAi vectors for stable and transient suppression of gene function in rice. Plant Cell Physiol 45: 490-495.
    • (2004) Plant Cell Physiol , vol.45 , pp. 490-495
    • Miki, D.1    Shimamoto, K.2
  • 29
    • 14644422554 scopus 로고    scopus 로고
    • Spotted leaf11, a negative regulator of plant cell death and defense, encodes a U-box/armadillo repeat protein endowed with E3 ubiquitin ligase activity
    • Zeng LR, Qu S, Bordeos A, Yang C, Baraoidan M, et al. (2004) Spotted leaf11, a negative regulator of plant cell death and defense, encodes a U-box/armadillo repeat protein endowed with E3 ubiquitin ligase activity. Plant Cell 16: 2795-2808.
    • (2004) Plant Cell , vol.16 , pp. 2795-2808
    • Zeng, L.R.1    Qu, S.2    Bordeos, A.3    Yang, C.4    Baraoidan, M.5
  • 31
    • 34447102459 scopus 로고    scopus 로고
    • Molecular basis for target RNA recognition and cleavage by human RISC
    • Ameres SL, Martinez J, Schroeder R (2007) Molecular basis for target RNA recognition and cleavage by human RISC. Cell 130: 101-112.
    • (2007) Cell , vol.130 , pp. 101-112
    • Ameres, S.L.1    Martinez, J.2    Schroeder, R.3
  • 32
    • 34748821761 scopus 로고    scopus 로고
    • The role of site accessibility in microRNA target recognition
    • Kertesz M, Iovino N, Unnerstall U, Gaul U, Segal E (2007) The role of site accessibility in microRNA target recognition. Nat Genet 39: 1278-1284.
    • (2007) Nat Genet , vol.39 , pp. 1278-1284
    • Kertesz, M.1    Iovino, N.2    Unnerstall, U.3    Gaul, U.4    Segal, E.5
  • 34
    • 33749438388 scopus 로고    scopus 로고
    • Designing siRNA that distinguish between genes that differ by a single nucleotide
    • Schwarz DS, Ding H, Kennington L, Moore JT, Schelter J, et al. (2006) Designing siRNA that distinguish between genes that differ by a single nucleotide. PLoS Genet 2: e140.
    • (2006) PLoS Genet , vol.2
    • Schwarz, D.S.1    Ding, H.2    Kennington, L.3    Moore, J.T.4    Schelter, J.5
  • 35
    • 3843065475 scopus 로고    scopus 로고
    • High throughput T-DNA insertion mutagenesis in rice: A first step towards in silico reverse genetics
    • Sallaud C, Gay C, Larmande P, Bès M, Piffanelli P, et al. (2004) High throughput T-DNA insertion mutagenesis in rice: a first step towards in silico reverse genetics. Plant J 39: 450-464.
    • (2004) Plant J , vol.39 , pp. 450-464
    • Sallaud, C.1    Gay, C.2    Larmande, P.3    Bès, M.4    Piffanelli, P.5
  • 36
    • 33845618112 scopus 로고    scopus 로고
    • The molecular genetics of crop domestication
    • Doebley JF, Gaut BS, Smith BD (2006) The molecular genetics of crop domestication. Cell 127: 1309-1321.
    • (2006) Cell , vol.127 , pp. 1309-1321
    • Doebley, J.F.1    Gaut, B.S.2    Smith, B.D.3
  • 37
    • 0036166154 scopus 로고    scopus 로고
    • Diverse variation of reproductive barriers in three intraspecific rice crosses
    • Harushima Y, Nakagahra M, Yano M, Sasaki T, Kurata N (2002) Diverse variation of reproductive barriers in three intraspecific rice crosses. Genetics 160: 313-322.
    • (2002) Genetics , vol.160 , pp. 313-322
    • Harushima, Y.1    Nakagahra, M.2    Yano, M.3    Sasaki, T.4    Kurata, N.5
  • 39
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792-1797.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 40
    • 33846101405 scopus 로고    scopus 로고
    • The TIGR Rice Genome Annotation Resource: Improvements and new features
    • Ouyang S, Zhu W, Hamilton J, Lin H, Campbell M, et al. (2007) The TIGR Rice Genome Annotation Resource: improvements and new features. Nucleic Acids Res 35: D883-887.
    • (2007) Nucleic Acids Res , vol.35
    • Ouyang, S.1    Zhu, W.2    Hamilton, J.3    Lin, H.4    Campbell, M.5
  • 41
    • 0034201441 scopus 로고    scopus 로고
    • EMBOSS: The European Molecular Biology Open Software Suite
    • Rice P, Longden I, Bleasby A (2000) EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet 16: 276-277.
    • (2000) Trends Genet , vol.16 , pp. 276-277
    • Rice, P.1    Longden, I.2    Bleasby, A.3
  • 42
    • 33644795388 scopus 로고    scopus 로고
    • Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice
    • Liu B, Li P, Li X, Liu C, Cao S, et al. (2005) Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice. Plant Physiol 139: 296-305.
    • (2005) Plant Physiol , vol.139 , pp. 296-305
    • Liu, B.1    Li, P.2    Li, X.3    Liu, C.4    Cao, S.5
  • 44
    • 33750129017 scopus 로고    scopus 로고
    • Japonica rice varieties (Oryza sativa, Nipponbare, and others)
    • Hervé P, Kayano T (2006) Japonica rice varieties (Oryza sativa, Nipponbare, and others). Methods Mol Biol 343: 213-222.
    • (2006) Methods Mol Biol , vol.343 , pp. 213-222
    • Hervé, P.1    Kayano, T.2
  • 45
    • 33744956603 scopus 로고    scopus 로고
    • Improved protocols for transformation of indica rice mediated by Agrobacterium lumefaciens
    • Hiei Y, Komari T (2006) Improved protocols for transformation of indica rice mediated by Agrobacterium lumefaciens. Plant Cell Tissue Organ Cult 85: 271-283.
    • (2006) Plant Cell Tissue Organ Cult , vol.85 , pp. 271-283
    • Hiei, Y.1    Komari, T.2
  • 46
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • Pfaffl MW (2001) A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res 29: e45.
    • (2001) Nucleic Acids Res , vol.29
    • Pfaffl, M.W.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.