메뉴 건너뛰기




Volumn 744, Issue , 2011, Pages 57-79

Gene Function Analysis by Artificial MicroRNAs in Physcomitrella patens

Author keywords

Artificial microRNA; gene knockdown; microRNA; Physcomitrella patens; RNA interference

Indexed keywords

MICRORNA; SYNTHETIC DNA;

EID: 79961145380     PISSN: 10643745     EISSN: 19406029     Source Type: Book Series    
DOI: 10.1007/978-1-61779-123-9_5     Document Type: Chapter
Times cited : (6)

References (39)
  • 2
    • 0027751663 scopus 로고
    • The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
    • Lee, R. C., Feinbaum, R. L., and Ambros, V. (1993) The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 75, 843–854.
    • (1993) Cell , vol.75 , pp. 843-854
    • Lee, R.C.1    Feinbaum, R.L.2    Ambros, V.3
  • 3
    • 0000213492 scopus 로고
    • Reversible methylation and inactivation of marker genes in sequentially transformed tobacco plants
    • Matzke, M. A., Primig, M., Trnovsky, J., and Matzke, A. J. (1989) Reversible methylation and inactivation of marker genes in sequentially transformed tobacco plants. EMBO J. 8, 643–649.
    • (1989) EMBO J , vol.8 , pp. 643-649
    • Matzke, M.A.1    Primig, M.2    Trnovsky, J.3    Matzke, A.J.4
  • 4
    • 0001359591 scopus 로고
    • Introduction of a chimeric chalcone synthase gene into Petunia results in reversible co-suppression of homologous genes in trans
    • Napoli, C., Lemieux, C., and Jorgensen, R. (1990) Introduction of a chimeric chalcone synthase gene into Petunia results in reversible co-suppression of homologous genes in trans. Plant Cell 2, 279–289.
    • (1990) Plant Cell , vol.2 , pp. 279-289
    • Napoli, C.1    Lemieux, C.2    Jorgensen, R.3
  • 5
    • 14644393684 scopus 로고    scopus 로고
    • Perspective: Machines for RNAi
    • Tomari, Y. and Zamore, P. D. (2005) Perspective: machines for RNAi. Genes Dev. 19, 517–529.
    • (2005) Genes Dev , vol.19 , pp. 517-529
    • Tomari, Y.1    Zamore, P.D.2
  • 6
    • 0033615491 scopus 로고    scopus 로고
    • A species of small antisense RNA in posttranscriptional gene silencing in plants
    • Hamilton, A. J. and Baulcombe, D. C. (1999) A species of small antisense RNA in posttranscriptional gene silencing in plants. Science 286, 950–952.
    • (1999) Science , vol.286 , pp. 950-952
    • Hamilton, A.J.1    Baulcombe, D.C.2
  • 7
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: Genomics, biogenesis, mechanism
    • Bartel, D. P. (2004) MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 116, 281–297.
    • (2004) And Function. Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1
  • 8
    • 35348996554 scopus 로고    scopus 로고
    • Specialization and evolution of endogenous small RNA pathways
    • Chapman, E. J. and Carrington, J. C. (2007) Specialization and evolution of endogenous small RNA pathways. Nat. Rev. Genet. 8, 884–896.
    • (2007) Nat. Rev. Genet. , vol.8 , pp. 884-896
    • Chapman, E.J.1    Carrington, J.C.2
  • 9
    • 4344637081 scopus 로고    scopus 로고
    • Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions
    • Kurihara, Y. and Watanabe, Y. (2004) Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions. Proc. Natl. Acad. Sci. USA 101, 12753–12758.
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 12753-12758
    • Kurihara, Y.1    Watanabe, Y.2
  • 11
    • 34547668337 scopus 로고    scopus 로고
    • Common functions for diverse small RNAs of land plants
    • Axtell, M. J., Snyder, J. A., and Bartel, D. P. (2007) Common functions for diverse small RNAs of land plants. Plant Cell 19, 1750– 1769.
    • (2007) Plant Cell , vol.19 , pp. 1750-1769
    • Axtell, M.J.1    Snyder, J.A.2    Bartel, D.P.3
  • 12
    • 34047136677 scopus 로고    scopus 로고
    • Evidence for the rapid expansion of microRNA-mediated regulation in early land plant evolution
    • Fattash, I., Voss, B., Reski, R., Hess, W. R., and Frank, W. (2007) Evidence for the rapid expansion of microRNA-mediated regulation in early land plant evolution. BMC Plant Biol. 7, 13.
    • (2007) BMC Plant Biol , vol.7
    • Fattash, I.1    Voss, B.2    Reski, R.3    Hess, W.R.4    Frank, W.5
  • 14
    • 38949151063 scopus 로고    scopus 로고
    • Gene silencing in plants using artificial microRNAs and other small RNAs
    • Ossowski, S., Schwab, R., and Weigel, D. (2008) Gene silencing in plants using artificial microRNAs and other small RNAs. Plant J. 53, 674–690.
    • (2008) Plant J , vol.53 , pp. 674-690
    • Ossowski, S.1    Schwab, R.2    Weigel, D.3
  • 15
    • 17444430392 scopus 로고    scopus 로고
    • microRNA-directed phasing during trans-acting siRNA biogenesis in plants
    • Allen, E., Xie, Z., Gustafson, A. M., and Carrington, J. C. (2005) microRNA-directed phasing during trans-acting siRNA biogenesis in plants. Cell 121, 207–221.
    • (2005) Cell , vol.121 , pp. 207-221
    • Allen, E.1    Xie, Z.2    Gustafson, A.M.3    Carrington, J.C.4
  • 16
    • 4644286235 scopus 로고    scopus 로고
    • SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis
    • Peragine, A., Yoshikawa, M., Wu, G., Albrecht, H. L., and Poethig, R. S. (2004) SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis. Genes Dev. 18, 2368–2379.
    • (2004) Genes Dev , vol.18 , pp. 2368-2379
    • Peragine, A.1    Yoshikawa, M.2    Wu, G.3    Albrecht, H.L.4    Poethig, R.S.5
  • 18
    • 24944491201 scopus 로고    scopus 로고
    • A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis
    • Yoshikawa, M., Peragine, A., Park, M. Y., and Poethig, R. S. (2005) A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis. Genes Dev. 19, 2164–2175.
    • (2005) Genes Dev , vol.19 , pp. 2164-2175
    • Yoshikawa, M.1    Peragine, A.2    Park, M.Y.3    Poethig, R.S.4
  • 19
    • 33750440526 scopus 로고    scopus 로고
    • A two-hit trigger for siRNA biogenesis in plants
    • Axtell, M. J., Jan, C., Rajagopalan, R., and Bartel, D. P. (2006) A two-hit trigger for siRNA biogenesis in plants. Cell 127, 565–577.
    • (2006) Cell , vol.127 , pp. 565-577
    • Axtell, M.J.1    Jan, C.2    Rajagopalan, R.3    Bartel, D.P.4
  • 20
    • 33646165249 scopus 로고    scopus 로고
    • Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis
    • Fahlgren, N., Montgomery, T. A., Howell, M. D., Allen, E., Dvorak, S. K., Alexander, A. L., and Carrington, J. C. (2006) Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis. Curr. Biol. 16, 939–944.
    • (2006) Curr. Biol. , vol.16 , pp. 939-944
    • Fahlgren, N.1    Montgomery, T.A.2    Howell, M.D.3    Allen, E.4    Dvorak, S.K.5    Alexander, A.L.6    Carrington, J.C.7
  • 22
    • 24944510549 scopus 로고    scopus 로고
    • MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for Arabidopsis lateral root development
    • Guo, H. S., Xie, Q., Fei, J. F., and Chua, N. H. (2005) MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for Arabidopsis lateral root development. Plant Cell 17, 1376–1386.
    • (2005) Plant Cell , vol.17 , pp. 1376-1386
    • Guo, H.S.1    Xie, Q.2    Fei, J.F.3    Chua, N.H.4
  • 23
    • 2442650370 scopus 로고    scopus 로고
    • The action of ARGONAUTE1 in the miRNA pathway and its regulation by the miRNA pathway are crucial for plant development
    • Vaucheret, H., Vazquez, F., Crete, P., and Bartel, D. P. (2004) The action of ARGONAUTE1 in the miRNA pathway and its regulation by the miRNA pathway are crucial for plant development. Genes Dev. 18, 1187–1197.
    • (2004) Genes Dev , vol.18 , pp. 1187-1197
    • Vaucheret, H.1    Vazquez, F.2    Crete, P.3    Bartel, D.P.4
  • 24
    • 33646185558 scopus 로고    scopus 로고
    • Endogenous and synthetic microRNAs stimulate simultaneous, efficient, and localized regulation of multiple targets in diverse species
    • Alvarez, J. P., Pekker, I., Goldshmidt, A., Blum, E., Amsellem, Z., and Eshed, Y. (2006) Endogenous and synthetic microRNAs stimulate simultaneous, efficient, and localized regulation of multiple targets in diverse species. Plant Cell 18, 1134–1151.
    • (2006) Plant Cell , vol.18 , pp. 1134-1151
    • Alvarez, J.P.1    Pekker, I.2    Goldshmidt, A.3    Blum, E.4    Amsellem, Z.5    Eshed, Y.6
  • 26
    • 4444234497 scopus 로고    scopus 로고
    • In vivo investigation of the transcription, processing, endonucleolytic activity, and functional relevance of the spatial distribution of a plant miRNA
    • Parizotto, E. A., Dunoyer, P., Rahm, N., Himber, C., and Voinnet, O. (2004) In vivo investigation of the transcription, processing, endonucleolytic activity, and functional relevance of the spatial distribution of a plant miRNA. Genes Dev. 18, 2237–2242.
    • (2004) Genes Dev , vol.18 , pp. 2237-2242
    • Parizotto, E.A.1    Dunoyer, P.2    Rahm, N.3    Himber, C.4    Voinnet, O.5
  • 27
    • 33745393624 scopus 로고    scopus 로고
    • Highly specific gene silencing by artificial microRNAs in Arabidopsis
    • Schwab, R., Ossowski, S., Riester, M., Warthmann, N., and Weigel, D. (2006) Highly specific gene silencing by artificial microRNAs in Arabidopsis. Plant Cell 18, 1121–1133.
    • (2006) Plant Cell , vol.18 , pp. 1121-1133
    • Schwab, R.1    Ossowski, S.2    Riester, M.3    Warthmann, N.4    Weigel, D.5
  • 28
    • 46649106719 scopus 로고    scopus 로고
    • Highly specific gene silencing by artificial miRNAs in rice
    • Warthmann, N., Chen, H., Ossowski, S., Weigel, D., and Herve, P. (2008) Highly specific gene silencing by artificial miRNAs in rice. PLoS ONE 3, e1829.
    • (2008) Plos ONE , vol.3
    • Warthmann, N.1    Chen, H.2    Ossowski, S.3    Weigel, D.4    Herve, P.5
  • 29
    • 0036294527 scopus 로고    scopus 로고
    • Both natural and designed micro RNAs can inhibit the expression of cognate mRNAs when expressed in human cells
    • Zeng, Y., Wagner, E. J., and Cullen, B. R. (2002) Both natural and designed micro RNAs can inhibit the expression of cognate mRNAs when expressed in human cells. Mol. Cell 9, 1327–1333.
    • (2002) Mol. Cell , vol.9 , pp. 1327-1333
    • Zeng, Y.1    Wagner, E.J.2    Cullen, B.R.3
  • 30
    • 2342471249 scopus 로고    scopus 로고
    • Enhanced gene silencing of HIV-1 specific siRNA using microRNA designed hairpins
    • Boden, D., Pusch, O., Silbermann, R., Lee, F., Tucker, L., and Ramratnam, B. (2004) Enhanced gene silencing of HIV-1 specific siRNA using microRNA designed hairpins. Nucleic Acids Res. 32, 1154–1158.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1154-1158
    • Boden, D.1    Pusch, O.2    Silbermann, R.3    Lee, F.4    Tucker, L.5    Ramratnam, B.6
  • 32
    • 34249951149 scopus 로고    scopus 로고
    • Artificial microRNA-mediated virus resistance in plants
    • Qu, J., Ye, J., and Fang, R. (2007) Artificial microRNA-mediated virus resistance in plants. J. Virol. 81, 6690–6699.
    • (2007) J. Virol. , vol.81 , pp. 6690-6699
    • Qu, J.1    Ye, J.2    Fang, R.3
  • 33
    • 57749102564 scopus 로고    scopus 로고
    • Specific gene silencing by artificial microRNAs in Physcomitrella patens: An alternative to targeted gene knockouts
    • Khraiwesh, B., Ossowski, S., Weigel, D., Reski, R., and Frank, W. (2008) Specific gene silencing by artificial microRNAs in Physcomitrella patens: An alternative to targeted gene knockouts. Plant Physiol. 148, 684–693.
    • (2008) Plant Physiol , vol.148 , pp. 684-693
    • Khraiwesh, B.1    Ossowski, S.2    Weigel, D.3    Reski, R.4    Frank, W.5
  • 37
    • 20144383719 scopus 로고    scopus 로고
    • Molecular tools to study Physcomitrella patens
    • Frank, W., Decker, E. L., and Reski, R. (2005) Molecular tools to study Physcomitrella patens. Plant Biol. 7, 220–227.
    • (2005) Plant Biol , vol.7 , pp. 220-227
    • Frank, W.1    Decker, E.L.2    Reski, R.3
  • 39
    • 0037144457 scopus 로고    scopus 로고
    • Cleavage of Scarecrowlike mRNA targets directed by a class of Arabidopsis miRNA
    • Llave, C., Xie, Z., Kasschau, K. D., and Carrington, J. C. (2002) Cleavage of Scarecrowlike mRNA targets directed by a class of Arabidopsis miRNA. Science 297, 2053–2056.
    • (2002) Science , vol.297 , pp. 2053-2056
    • Llave, C.1    Xie, Z.2    Kasschau, K.D.3    Carrington, J.C.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.