메뉴 건너뛰기




Volumn 279, Issue , 2014, Pages 24-31

Competitive binding assay for G-quadruplex DNA and sanguinarine based on room temperature phosphorescence of Mn-doped ZnS quantum dots

Author keywords

Circular dichroism; G quadruplex; Quantum dots; Room temperature phosphorescence; Sanguinarine

Indexed keywords


EID: 84894040720     PISSN: 10106030     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jphotochem.2013.12.024     Document Type: Article
Times cited : (12)

References (48)
  • 1
    • 20144369806 scopus 로고    scopus 로고
    • Highly prevalent putative quadruplex sequence motifs in human DNA
    • DOI 10.1093/nar/gki553
    • A.K. Todd, M. Johnston, and S. Neidle Highly prevalent putative quadruplex sequence motifs in human DNA Nucleic Acids Res. 33 2005 2901 2907 (Pubitemid 41511229)
    • (2005) Nucleic Acids Research , vol.33 , Issue.9 , pp. 2901-2907
    • Todd, A.K.1    Johnston, M.2    Neidle, S.3
  • 2
    • 0031000884 scopus 로고    scopus 로고
    • Long G tails at both ends of human chromosomes suggest a C strand degradation mechanism for telomere shortening
    • DOI 10.1016/S0092-8674(00)81908-X
    • V.L. Makarov, Y. Hirose, and J.P. Langmore Long G tails at both ends of human chromosomes suggest a C strand degradation mechanism for telomere shortening Cell 88 1997 657 666 (Pubitemid 27152408)
    • (1997) Cell , vol.88 , Issue.5 , pp. 657-666
    • Makarov, V.L.1    Hirose, Y.2    Langmore, J.P.3
  • 3
    • 33744472232 scopus 로고    scopus 로고
    • G-quadruplex formation within the promoter of the KRAS proto-oncogene and its effect on transcription
    • DOI 10.1093/nar/gkl286
    • S. Cogoi, and L.E. Xodo G-quadruplex formation within the promoter of the KRAS proto-oncogene and its effect on transcription Nucleic Acids Res. 34 2006 2536 2549 (Pubitemid 43985618)
    • (2006) Nucleic Acids Research , vol.34 , Issue.9 , pp. 2536-2549
    • Cogoi, S.1    Xodo, L.E.2
  • 4
    • 34848814236 scopus 로고    scopus 로고
    • Sequence occurrence and structural uniqueness of a G-quadruplex in the human c-kit promoter
    • DOI 10.1093/nar/gkm609
    • A.K. Todd, S.M. Haider, G.N. Parkinson, and S. Neidle Sequence occurrence and structural uniqueness of a G-quadruplex in the human c-kit promoter Nucleic Acids Res. 35 2007 5799 5808 (Pubitemid 47506295)
    • (2007) Nucleic Acids Research , vol.35 , Issue.17 , pp. 5799-5808
    • Todd, A.K.1    Haider, S.M.2    Parkinson, G.N.3    Neidle, S.4
  • 5
    • 84862916311 scopus 로고    scopus 로고
    • Interaction between three isoflavones and different isomers of human serum albumin
    • J. Ma, Y. Liu, and M.X. Xie Interaction between three isoflavones and different isomers of human serum albumin Spectrosc. Spect. Anal. 32 2012 1 6
    • (2012) Spectrosc. Spect. Anal. , vol.32 , pp. 1-6
    • Ma, J.1    Liu, Y.2    Xie, M.X.3
  • 6
    • 33947594129 scopus 로고    scopus 로고
    • Hyperactive Ras in developmental disorders and cancer
    • DOI 10.1038/nrc2109, PII NRC2109
    • S. Schubbert, K. Shannon, and G. Bollag Hyperactive Ras in developmental disorders and cancer Nat. Rev. Cancer 7 2007 295 308 (Pubitemid 46480970)
    • (2007) Nature Reviews Cancer , vol.7 , Issue.4 , pp. 295-308
    • Schubbert, S.1    Shannon, K.2    Bollag, G.3
  • 8
    • 66449128486 scopus 로고    scopus 로고
    • The D816V mutation of c-Kit circumvents a requirement for Src family kinases in c-Kit signal transduction
    • J. Sun, M. Pedersen, and L. Rönnstrand The D816V mutation of c-Kit circumvents a requirement for Src family kinases in c-Kit signal transduction J. Biol. Chem. 284 2009 11039 11047
    • (2009) J. Biol. Chem. , vol.284 , pp. 11039-11047
    • Sun, J.1    Pedersen, M.2    Rönnstrand, L.3
  • 13
    • 79951716375 scopus 로고    scopus 로고
    • Interaction of berberine, palmatine, coralyne, and sanguinarine to quadruplex DNA: A comparative spectroscopic and calorimetric study
    • K. Bhadra, and G.S. Kumar Interaction of berberine, palmatine, coralyne, and sanguinarine to quadruplex DNA: a comparative spectroscopic and calorimetric study Biochim. Biophys. Acta Gen. Subj. 1810 2011 485 496
    • (2011) Biochim. Biophys. Acta Gen. Subj. , vol.1810 , pp. 485-496
    • Bhadra, K.1    Kumar, G.S.2
  • 14
    • 34548024885 scopus 로고    scopus 로고
    • Molecular aspects on the interaction of protoberberine, benzophenanthridine, and aristolochia group of alkaloids with nucleic acid structures and biological perspectives
    • DOI 10.1002/med.20087
    • M. Maiti, and G.S. Kumar Molecular aspects on the interaction of protoberberine, benzophenanthridine, and aristolochia group of alkaloids with nucleic acid structures and biological perspectives Med. Res. Rev. 27 2007 649 695 (Pubitemid 47282448)
    • (2007) Medicinal Research Reviews , vol.27 , Issue.5 , pp. 649-695
    • Maiti, M.1    Kumar, G.S.2
  • 15
    • 79960651875 scopus 로고    scopus 로고
    • Development of a high-throughput G4-FID assay for screening and evaluation of small molecules binding quadruplex nucleic acid structures
    • E. Largy, F. Hamon, and M.-P. Teulade-Fichou Development of a high-throughput G4-FID assay for screening and evaluation of small molecules binding quadruplex nucleic acid structures Anal. Bioanal. Chem. 400 2011 3419 3427
    • (2011) Anal. Bioanal. Chem. , vol.400 , pp. 3419-3427
    • Largy, E.1    Hamon, F.2    Teulade-Fichou, M.-P.3
  • 16
    • 47849126383 scopus 로고    scopus 로고
    • Ligands playing musical chairs with G-quadruplex DNA: A rapid and simple displacement assay for identifying selective G-quadruplex binders
    • D. Monchaud, C. Allain, H. Bertrand, N. Smargiasso, F. Rosu, V. Gabelica, A. De Cian, J.L. Mergny, and M.R. Teulade-Fichou Ligands playing musical chairs with G-quadruplex DNA: a rapid and simple displacement assay for identifying selective G-quadruplex binders Biochimie 90 2008 1207 1223
    • (2008) Biochimie , vol.90 , pp. 1207-1223
    • Monchaud, D.1    Allain, C.2    Bertrand, H.3    Smargiasso, N.4    Rosu, F.5    Gabelica, V.6    De Cian, A.7    Mergny, J.L.8    Teulade-Fichou, M.R.9
  • 17
    • 33746809014 scopus 로고    scopus 로고
    • Development of a fluorescent intercalator displacement assay (G4-FID) for establishing quadruplex-DNA affinity and selectivity of putative ligands
    • DOI 10.1016/j.bmcl.2006.06.067, PII S0960894X06007335
    • D. Monchaud, C. Allain, and M.-P. Teulade-Fichou Development of a fluorescent intercalator displacement assay (G4-FID) for establishing quadruplex-DNA affinity and selectivity of putative ligands Bioorg. Med. Chem. Lett. 16 2006 4842 4845 (Pubitemid 44175856)
    • (2006) Bioorganic and Medicinal Chemistry Letters , vol.16 , Issue.18 , pp. 4842-4845
    • Monchaud, D.1    Allain, C.2    Teulade-Fichou, M.-P.3
  • 18
    • 79953688230 scopus 로고    scopus 로고
    • Synthesis and binding studies of novel diethynyl-pyridine amides with genomic promoter DNA G-quadruplexes
    • J. Dash, Z.A.E. Waller, G.D. Pantos, and S. Balasubramanian Synthesis and binding studies of novel diethynyl-pyridine amides with genomic promoter DNA G-quadruplexes Chem. Eur. J. 17 2011 4571 4581
    • (2011) Chem. Eur. J. , vol.17 , pp. 4571-4581
    • Dash, J.1    Waller, Z.A.E.2    Pantos, G.D.3    Balasubramanian, S.4
  • 19
    • 45949111852 scopus 로고    scopus 로고
    • Electrospray mass spectrometry to study drug-nucleic acids interactions
    • F. Rosu, E. De Pauw, and V. Gabelica Electrospray mass spectrometry to study drug-nucleic acids interactions Biochimie 90 2008 1074 1087
    • (2008) Biochimie , vol.90 , pp. 1074-1087
    • Rosu, F.1    De Pauw, E.2    Gabelica, V.3
  • 20
    • 49649096373 scopus 로고    scopus 로고
    • Screening potential antitumor agents from natural plant extracts by G-quadruplex recognition and NMR methods
    • Q. Zhou, L. Li, J. Xiang, Y. Tang, H. Zhang, S. Yang, Q. Li, Q. Yang, and G. Xu Screening potential antitumor agents from natural plant extracts by G-quadruplex recognition and NMR methods Angew. Chem. Int. Ed. 47 2008 5590 5592
    • (2008) Angew. Chem. Int. Ed. , vol.47 , pp. 5590-5592
    • Zhou, Q.1    Li, L.2    Xiang, J.3    Tang, Y.4    Zhang, H.5    Yang, S.6    Li, Q.7    Yang, Q.8    Xu, G.9
  • 21
    • 67650744583 scopus 로고    scopus 로고
    • Homogeneous selecting of a quadruplex-binding ligand-based gold nanoparticle fluorescence resonance energy transfer assay
    • Y. Jin, H. Li, and J. Bai Homogeneous selecting of a quadruplex-binding ligand-based gold nanoparticle fluorescence resonance energy transfer assay Anal. Chem. 81 2009 5709 5715
    • (2009) Anal. Chem. , vol.81 , pp. 5709-5715
    • Jin, Y.1    Li, H.2    Bai, J.3
  • 22
    • 35448975647 scopus 로고    scopus 로고
    • Use of competition dialysis in the discovery of G-quadruplex selective ligands
    • DOI 10.1016/j.ymeth.2007.08.003, PII S1046202307001387
    • P. Ragazzon, and J.B. Chaires Use of competition dialysis in the discovery of G-quadruplex selective ligands Methods 43 2007 313 323 (Pubitemid 47633211)
    • (2007) Methods , vol.43 , Issue.4 , pp. 313-323
    • Ragazzon, P.1    Chaires, J.B.2
  • 24
    • 67649234103 scopus 로고    scopus 로고
    • Spectroscopic investigation on the interaction of protocatechuic acid and veratric acid with biomacromolecules
    • M. Long, and M.X. Xie Spectroscopic investigation on the interaction of protocatechuic acid and veratric acid with biomacromolecules Spectrosc. Spect. Anal 29 2009 1603 1606
    • (2009) Spectrosc. Spect. Anal , vol.29 , pp. 1603-1606
    • Long, M.1    Xie, M.X.2
  • 25
    • 79955122212 scopus 로고    scopus 로고
    • Sensing polymer/DNA polyplex dissociation using quantum dot fluorophores
    • B. Zhang, Y. Zhang, S.K. Mallapragada, and A.R. Clapp Sensing polymer/DNA polyplex dissociation using quantum dot fluorophores ACS Nano 5 2011 129 138
    • (2011) ACS Nano , vol.5 , pp. 129-138
    • Zhang, B.1    Zhang, Y.2    Mallapragada, S.K.3    Clapp, A.R.4
  • 26
    • 78049331881 scopus 로고    scopus 로고
    • Highly sensitive multiplexed heavy metal detection using quantum-dot-labeled DNAzymes
    • C.-S. Wu, M.K.K. Oo, and X. Fan Highly sensitive multiplexed heavy metal detection using quantum-dot-labeled DNAzymes ACS Nano 4 2010 5897 5904
    • (2010) ACS Nano , vol.4 , pp. 5897-5904
    • Wu, C.-S.1    Oo, M.K.K.2    Fan, X.3
  • 27
    • 78650178923 scopus 로고    scopus 로고
    • Biosilicated CdSe/ZnS quantum dots as photoluminescent transducers for acetylcholinesterase-based biosensors
    • R. Buiculescu, M. Hatzimarinaki, and N.A. Chaniotakis Biosilicated CdSe/ZnS quantum dots as photoluminescent transducers for acetylcholinesterase- based biosensors Anal. Bioanal. Chem. 398 2010 3015 3021
    • (2010) Anal. Bioanal. Chem. , vol.398 , pp. 3015-3021
    • Buiculescu, R.1    Hatzimarinaki, M.2    Chaniotakis, N.A.3
  • 28
    • 68849085889 scopus 로고    scopus 로고
    • Analysis of nonadherent apoptotic cells by a quantum dots probe in a microfluidic device for drug screening
    • L. Zhao, P. Cheng, J. Li, Y. Zhang, M. Gu, J. Liu, J. Zhang, and J.J. Zhu Analysis of nonadherent apoptotic cells by a quantum dots probe in a microfluidic device for drug screening Anal. Chem. 81 2009 7075 7080
    • (2009) Anal. Chem. , vol.81 , pp. 7075-7080
    • Zhao, L.1    Cheng, P.2    Li, J.3    Zhang, Y.4    Gu, M.5    Liu, J.6    Zhang, J.7    Zhu, J.J.8
  • 30
    • 58149475268 scopus 로고    scopus 로고
    • Anticancer drug-DNA interactions measured using a photoinduced electron-transfer mechanism based on luminescent quantum dots
    • J. Yuan, W. Guo, X. Yang, and E. Wang Anticancer drug-DNA interactions measured using a photoinduced electron-transfer mechanism based on luminescent quantum dots Anal. Chem. 81 2009 362 368
    • (2009) Anal. Chem. , vol.81 , pp. 362-368
    • Yuan, J.1    Guo, W.2    Yang, X.3    Wang, E.4
  • 31
    • 66149120243 scopus 로고    scopus 로고
    • Quantum dot-ruthenium complex dyads: Recognition of double-strand DNA through dual-color fluorescence detection
    • D. Zhao, W.H. Chan, Z. He, and T. Qiu Quantum dot-ruthenium complex dyads: recognition of double-strand DNA through dual-color fluorescence detection Anal. Chem. 81 2009 3537 3543
    • (2009) Anal. Chem. , vol.81 , pp. 3537-3543
    • Zhao, D.1    Chan, W.H.2    He, Z.3    Qiu, T.4
  • 32
    • 43949098274 scopus 로고    scopus 로고
    • Exploring Mn-doped ZnS quantum dots for the room-temperature phosphorescence detection of enoxacin in biological fluids
    • DOI 10.1021/ac800100y
    • Y. He, H.F. Wang, and X.P. Yan Exploring Mn-doped ZnS quantum dots for the room-temperature phosphorescence detection of enoxacin in biological fluids Anal. Chem. 80 2008 3832 3837 (Pubitemid 351705889)
    • (2008) Analytical Chemistry , vol.80 , Issue.10 , pp. 3832-3837
    • He, Y.1    Wang, H.-F.2    Yan, X.-P.3
  • 33
    • 66249133058 scopus 로고    scopus 로고
    • Self-assembly of Mn-doped ZnS QDs/Octa (3-aminopropyl) octasilsequioxane octahydrochloride nanohybrids for optosensing DNA
    • Y. He, H.F. Wang, and X.P. Yan self-assembly of Mn-doped ZnS QDs/Octa (3-aminopropyl) octasilsequioxane octahydrochloride nanohybrids for optosensing DNA Chem. Eur. J. 15 2009 5436 5440
    • (2009) Chem. Eur. J. , vol.15 , pp. 5436-5440
    • He, Y.1    Wang, H.F.2    Yan, X.P.3
  • 34
    • 84055178449 scopus 로고    scopus 로고
    • Copper-or manganese-doped ZnS quantum dots as fluorescent probes for detecting folic acid in aqueous media
    • G.M. Malgorzata, C. Gilles, l. Janina, and S. Raphäel Copper-or manganese-doped ZnS quantum dots as fluorescent probes for detecting folic acid in aqueous media J. Lumin. 132 2012 987 991
    • (2012) J. Lumin. , vol.132 , pp. 987-991
    • Malgorzata, G.M.1    Gilles, C.2    Janina, L.3    Raphäel, S.4
  • 35
    • 64549118682 scopus 로고    scopus 로고
    • Surface molecular imprinting on Mn-doped ZnS quantum dots for room-temperature phosphorescence optosensing of pentachlorophenol in Water
    • H.F. Wang, Y. He, and X.P. Yan Surface molecular imprinting on Mn-doped ZnS quantum dots for room-temperature phosphorescence optosensing of pentachlorophenol in Water Anal. Chem. 81 2009 1615 1621
    • (2009) Anal. Chem. , vol.81 , pp. 1615-1621
    • Wang, H.F.1    He, Y.2    Yan, X.P.3
  • 36
    • 78449294029 scopus 로고    scopus 로고
    • Ascorbic acid induced enhancement of room temperature phosphorescence of sodium tripolyphosphate-capped Mn-doped ZnS quantum dots: Mechanism and bioprobe applications
    • H.F. Wang, Y. Li, Y.Y. Wu, Y. He, and X.P. Yan Ascorbic acid induced enhancement of room temperature phosphorescence of sodium tripolyphosphate- capped Mn-doped ZnS quantum dots: mechanism and bioprobe applications Chem. Eur. J. 16 2010 12988 12994
    • (2010) Chem. Eur. J. , vol.16 , pp. 12988-12994
    • Wang, H.F.1    Li, Y.2    Wu, Y.Y.3    He, Y.4    Yan, X.P.5
  • 37
    • 81255146382 scopus 로고    scopus 로고
    • Turn-on room temperature phosphorescence assay of heparin with tunable sensitivity and detection window based on target-induced self-assembly of polyethyleneimine capped Mn-doped ZnS quantum dots
    • H. Yan, and H.F. Wang Turn-on room temperature phosphorescence assay of heparin with tunable sensitivity and detection window based on target-induced self-assembly of polyethyleneimine capped Mn-doped ZnS quantum dots Anal. Chem. 83 2011 8589 8595
    • (2011) Anal. Chem. , vol.83 , pp. 8589-8595
    • Yan, H.1    Wang, H.F.2
  • 38
    • 76849098940 scopus 로고    scopus 로고
    • Conjugation of glucose oxidase onto Mn-doped ZnS quantum dots for phosphorescent sensing of glucose in biological fluids
    • P. Wu, Y. He, H.F. Wang, and X.P. Yan Conjugation of glucose oxidase onto Mn-doped ZnS quantum dots for phosphorescent sensing of glucose in biological fluids Anal. Chem. 82 2010 1427 1433
    • (2010) Anal. Chem. , vol.82 , pp. 1427-1433
    • Wu, P.1    He, Y.2    Wang, H.F.3    Yan, X.P.4
  • 39
    • 80051729387 scopus 로고    scopus 로고
    • A Multidimensional sensing device for the discrimination of proteins based on manganese-doped ZnS quantum dots
    • P. Wu, L.N. Miao, H.F. Wang, X.G. Shao, and X.P. Yan A Multidimensional sensing device for the discrimination of proteins based on manganese-doped ZnS quantum dots Angew. Chem. Int. Ed. 50 2011 8118 8121
    • (2011) Angew. Chem. Int. Ed. , vol.50 , pp. 8118-8121
    • Wu, P.1    Miao, L.N.2    Wang, H.F.3    Shao, X.G.4    Yan, X.P.5
  • 42
    • 0002848296 scopus 로고
    • Fluorescence quenching reactions: Probing biological macro-molecular structures
    • T.G. Dewey, Plenum New York
    • M.R. Eftink Fluorescence quenching reactions: probing biological macro-molecular structures T.G. Dewey, Biophysical and Biochemical Aspects of Fluorescence Spectroscopy 1991 Plenum New York
    • (1991) Biophysical and Biochemical Aspects of Fluorescence Spectroscopy
    • Eftink, M.R.1
  • 43
    • 63949084272 scopus 로고    scopus 로고
    • Optical sensing of heavy metal ions in anionic micellar solution using a Pd porphyrin phosphorescent probe
    • S.A. Hu, H.S. Mao, and Y. Wang Optical sensing of heavy metal ions in anionic micellar solution using a Pd porphyrin phosphorescent probe J. Photochem. Photobiol. A 204 2009 1 6
    • (2009) J. Photochem. Photobiol. A , vol.204 , pp. 1-6
    • Hu, S.A.1    Mao, H.S.2    Wang, Y.3
  • 44
    • 0015907980 scopus 로고
    • Quenching of fluorescence by oxygen-probe for structural fluctuations in macromolecules
    • J.R. Lakowicz, and G. Weber Quenching of fluorescence by oxygen-probe for structural fluctuations in macromolecules Biochemistry 12 1973 4161 4170
    • (1973) Biochemistry , vol.12 , pp. 4161-4170
    • Lakowicz, J.R.1    Weber, G.2
  • 45
    • 84869771741 scopus 로고    scopus 로고
    • DNA abasic site-selective enhancement of sanguinarine fluorescence with a large emission shift
    • F. Wu, Y.W. Sun, Y. Shao, S.J. Xu, G.Y. Liu, J. Peng, and L.L. Liu DNA abasic site-selective enhancement of sanguinarine fluorescence with a large emission shift PLoS ONE 7 2012 e48251
    • (2012) PLoS ONE , vol.7 , pp. 48251
    • Wu, F.1    Sun, Y.W.2    Shao, Y.3    Xu, S.J.4    Liu, G.Y.5    Peng, J.6    Liu, L.L.7
  • 46
    • 79960840968 scopus 로고    scopus 로고
    • Binding properties of human telomeric quadruplex multimers: A new route for drug design
    • A. Cummaro, I. Fotticchia, M. Franceschin, C. Giancola, and L. Petraccone Binding properties of human telomeric quadruplex multimers: a new route for drug design Biochimie 93 2011 1392 1400
    • (2011) Biochimie , vol.93 , pp. 1392-1400
    • Cummaro, A.1    Fotticchia, I.2    Franceschin, M.3    Giancola, C.4    Petraccone, L.5
  • 47
    • 84877732242 scopus 로고    scopus 로고
    • Evidence of different G-quadruplex DNA binding with biogenic polyamines probed by electrospray ionization-quadrupole time of flight mass spectrometry, circular dichroism and atomic force microscopy
    • L.N. Wen, and M.X. Xie Evidence of different G-quadruplex DNA binding with biogenic polyamines probed by electrospray ionization-quadrupole time of flight mass spectrometry, circular dichroism and atomic force microscopy Biochimie 96 2013 1185 1195
    • (2013) Biochimie , vol.96 , pp. 1185-1195
    • Wen, L.N.1    Xie, M.X.2
  • 48
    • 33646943863 scopus 로고    scopus 로고
    • Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution
    • DOI 10.1093/nar/gkl348
    • A. Ambrus, D. Chen, J.X. Dai, T. Bialis, R.A. Jones, and D.Z. Yang Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution Nucleic Acids Res. 34 2006 2723 2735 (Pubitemid 43985634)
    • (2006) Nucleic Acids Research , vol.34 , Issue.9 , pp. 2723-2735
    • Ambrus, A.1    Chen, D.2    Dai, J.3    Bialis, T.4    Jones, R.A.5    Yang, D.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.