메뉴 건너뛰기




Volumn 80, Issue 4, 2014, Pages 1322-1329

Cross-institute evaluations of inhibitor-resistant PCR reagents for direct testing of aerosol and blood samples containing biological warfare agent DNA

Author keywords

[No Author keywords available]

Indexed keywords

AEROSOL COLLECTORS; BACILLUS ANTHRACIS; BACILLUS SUBTILIS; BIOLOGICAL WARFARE AGENTS; LIMIT OF DETECTION; PATHOGEN DETECTION; REACTION MIXTURE; REAL-TIME PCR ASSAY;

EID: 84893378489     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.03478-13     Document Type: Article
Times cited : (14)

References (32)
  • 2
    • 76849096271 scopus 로고    scopus 로고
    • Development of real-time PCR assays for the specific detection of Francisella tularensis ssp. tularensis, holarctica and mediaasiatica
    • Mitchell JL, Chatwell N, Christensen D, Diaper H, Minogue TD, Parsons TM, Walker B, Weller SA. 2010. Development of real-time PCR assays for the specific detection of Francisella tularensis ssp. tularensis, holarctica and mediaasiatica. Mol. Cell. Probes 24:72-76. http://dx.doi.org/10.1016/j.mcp.2009.10.004.
    • (2010) Mol. Cell. Probes , vol.24 , pp. 72-76
    • Mitchell, J.L.1    Chatwell, N.2    Christensen, D.3    Diaper, H.4    Minogue, T.D.5    Parsons, T.M.6    Walker, B.7    Weller, S.A.8
  • 3
    • 84859962623 scopus 로고    scopus 로고
    • The potential of TaqMan Array Cards for detection of multiple biological agents by real-time PCR
    • Rachwal PA, Rose HL, Cox V, Lukaszewski RA, Murch AL, Weller SA. 2012. The potential of TaqMan Array Cards for detection of multiple biological agents by real-time PCR. PLoS One 7:e35971. http://dx.doi.org/10.1371/journal.pone.0035971.
    • (2012) PLoS One , vol.7
    • Rachwal, P.A.1    Rose, H.L.2    Cox, V.3    Lukaszewski, R.A.4    Murch, A.L.5    Weller, S.A.6
  • 6
    • 0028674028 scopus 로고
    • Identification of the heme compound copurified with deoxyribonucleic acid (DNA) from bloodstains, a major inhibitor of polymerase chain reaction (PCR) amplification
    • Akane A, Matsubara K, Nakamura H, Takahashi S, Kimura K. 1994. Identification of the heme compound copurified with deoxyribonucleic acid (DNA) from bloodstains, a major inhibitor of polymerase chain reaction (PCR) amplification. J. Forensic Sci. 39:362-372.
    • (1994) J. Forensic Sci , vol.39 , pp. 362-372
    • Akane, A.1    Matsubara, K.2    Nakamura, H.3    Takahashi, S.4    Kimura, K.5
  • 8
    • 4344599509 scopus 로고    scopus 로고
    • Pre-PCR processing: strategies to generate PCR-compatible samples
    • Radstrom P, Knutsson R, Wolffs P, Lovenklev M, Lofstrom C. 2004. Pre-PCR processing: strategies to generate PCR-compatible samples. Mol. Biotechnol. 26:133-146. http://dx.doi.org/10.1385/MB:26:2:133.
    • (2004) Mol. Biotechnol , vol.26 , pp. 133-146
    • Radstrom, P.1    Knutsson, R.2    Wolffs, P.3    Lovenklev, M.4    Lofstrom, C.5
  • 9
    • 0026597527 scopus 로고
    • Detection of low numbers of bacterial cells in soils and sediments by polymerase chain reaction
    • Tsai YL, Olson BH. 1992. Detection of low numbers of bacterial cells in soils and sediments by polymerase chain reaction. Appl. Environ. Microbiol. 58:754-757.
    • (1992) Appl. Environ. Microbiol , vol.58 , pp. 754-757
    • Tsai, Y.L.1    Olson, B.H.2
  • 10
    • 0026464767 scopus 로고
    • The magnetic immuno polymerase chain reaction assay for direct detection of salmonellae in fecal samples
    • Widjojoatmodjo MN, Fluit AC, Torensma R, Verdonk GP, Verhoef J. 1992. The magnetic immuno polymerase chain reaction assay for direct detection of salmonellae in fecal samples. J. Clin. Microbiol. 30:3195-3199.
    • (1992) J. Clin. Microbiol , vol.30 , pp. 3195-3199
    • Widjojoatmodjo, M.N.1    Fluit, A.C.2    Torensma, R.3    Verdonk, G.P.4    Verhoef, J.5
  • 11
    • 0030748867 scopus 로고    scopus 로고
    • Inhibition and facilitation of nucleic acid amplification
    • Wilson IG. 1997. Inhibition and facilitation of nucleic acid amplification. Appl. Environ. Microbiol. 63:3741-3751.
    • (1997) Appl. Environ. Microbiol , vol.63 , pp. 3741-3751
    • Wilson, I.G.1
  • 12
    • 79960811684 scopus 로고    scopus 로고
    • Comparison of eight methods for the extraction of Bacillus atrophaeus spore DNA from eleven common interferents and a common swab
    • Rose HL, Dewey CA, Ely MS, Willoughby SL, Parsons TM, Cox V, Spencer PM, Weller SA. 2011. Comparison of eight methods for the extraction of Bacillus atrophaeus spore DNA from eleven common interferents and a common swab. PLoS One 6:e22668. http://dx.doi.org/10.1371/journal.pone.0022668.
    • (2011) PLoS One , vol.6
    • Rose, H.L.1    Dewey, C.A.2    Ely, M.S.3    Willoughby, S.L.4    Parsons, T.M.5    Cox, V.6    Spencer, P.M.7    Weller, S.A.8
  • 13
    • 84867657819 scopus 로고    scopus 로고
    • Comparison of nucleic acid extraction platforms for detection of select biothreat agents for use in clinical resource limited settings
    • Shipley MA, Koehler JW, Kulesh DA, Minogue TD. 2012. Comparison of nucleic acid extraction platforms for detection of select biothreat agents for use in clinical resource limited settings. J. Microbiol. Methods 91:179-183. http://dx.doi.org/10.1016/j.mimet.2012.06.008.
    • (2012) J. Microbiol. Methods , vol.91 , pp. 179-183
    • Shipley, M.A.1    Koehler, J.W.2    Kulesh, D.A.3    Minogue, T.D.4
  • 14
    • 0029858729 scopus 로고    scopus 로고
    • Comparison of hepatitis B virus DNAextractions from serum by the QIAamp blood kit, GeneReleaser, and the phenol-chloroform method
    • Kramvis A, Bukofzer S, Kew MC. 1996. Comparison of hepatitis B virus DNAextractions from serum by the QIAamp blood kit, GeneReleaser, and the phenol-chloroform method. J. Clin. Microbiol. 34:2731-2733.
    • (1996) J. Clin. Microbiol , vol.34 , pp. 2731-2733
    • Kramvis, A.1    Bukofzer, S.2    Kew, M.C.3
  • 15
    • 63249099357 scopus 로고    scopus 로고
    • Mutants of Taq DNA polymerase resistant to PCR inhibitors allow DNA amplification from whole blood and crude soil samples
    • Kermekchiev MB, Kirilova LI, Vail EE, Barnes WM. 2009. Mutants of Taq DNA polymerase resistant to PCR inhibitors allow DNA amplification from whole blood and crude soil samples. Nucleic Acids Res. 37:e40. http://dx.doi.org/10.1093/nar/gkn1055.
    • (2009) Nucleic Acids Res , vol.37
    • Kermekchiev, M.B.1    Kirilova, L.I.2    Vail, E.E.3    Barnes, W.M.4
  • 16
    • 0034459011 scopus 로고    scopus 로고
    • Effects of amplification facilitators on diagnostic PCR in the presence of blood, feces, and meat
    • Abu Al-Soud W, Radstrom P. 2000. Effects of amplification facilitators on diagnostic PCR in the presence of blood, feces, and meat. J. Clin. Microbiol. 38:4463-4470. http://jcm.asm.org/content/38/12/4463.long.
    • (2000) J. Clin. Microbiol , vol.38 , pp. 4463-4470
    • Abu Al-Soud, W.1    Radstrom, P.2
  • 17
    • 84883625478 scopus 로고    scopus 로고
    • Evaluation of inhibitor-resistant real-time PCR methods for diagnostics in clinical and environmental samples
    • Trombley Hall A, Zovanyi AM, Christensen DR, Koehler JW, Minogue TD. 2013. Evaluation of inhibitor-resistant real-time PCR methods for diagnostics in clinical and environmental samples. PLoS One 8:e73845. http://dx.doi.org/10.1371/journal.pone.0073845.
    • (2013) PLoS One , vol.8
    • Trombley Hall, A.1    Zovanyi, A.M.2    Christensen, D.R.3    Koehler, J.W.4    Minogue, T.D.5
  • 18
    • 0030048084 scopus 로고    scopus 로고
    • Relief of amplification inhibition in PCR with bovine serum albumin or T4 gene 32 protein
    • Kreader CA. 1996. Relief of amplification inhibition in PCR with bovine serum albumin or T4 gene 32 protein. Appl. Environ. Microbiol. 62:1102-1106.
    • (1996) Appl. Environ. Microbiol , vol.62 , pp. 1102-1106
    • Kreader, C.A.1
  • 21
    • 78649404031 scopus 로고    scopus 로고
    • Antibody to the E3 glycoprotein protects mice against lethal Venezuelan equine encephalitis virus infection
    • Parker MD, Buckley MJ, Melanson VR, Glass PJ, Norwood D, Hart MK. 2010. Antibody to the E3 glycoprotein protects mice against lethal Venezuelan equine encephalitis virus infection. J. Virol. 84:12683-12690. http://dx.doi.org/10.1128/JVI.01345-10.
    • (2010) J. Virol , vol.84 , pp. 12683-12690
    • Parker, M.D.1    Buckley, M.J.2    Melanson, V.R.3    Glass, P.J.4    Norwood, D.5    Hart, M.K.6
  • 23
    • 0014575687 scopus 로고
    • A cyclone separator for aerosol sampling in the field
    • Errington FP, Powell EO. 1969. A cyclone separator for aerosol sampling in the field. J. Hyg. (Lond.) 67:387-399. http://dx.doi.org/10.1017/S0022172400041802.
    • (1969) J. Hyg. (Lond.) , vol.67 , pp. 387-399
    • Errington, F.P.1    Powell, E.O.2
  • 25
    • 42149168027 scopus 로고    scopus 로고
    • Bacillus anthracis spore suspensions: determination of stability and comparison of enumeration techniques
    • Almeida JL, Harper B, Cole KD. 2008. Bacillus anthracis spore suspensions: determination of stability and comparison of enumeration techniques. J. Appl. Microbiol. 104:1442-1448. http://dx.doi.org/10.1111/j.1365-2672.2007.03684.x.
    • (2008) J. Appl. Microbiol , vol.104 , pp. 1442-1448
    • Almeida, J.L.1    Harper, B.2    Cole, K.D.3
  • 28
    • 84864313787 scopus 로고    scopus 로고
    • Internally controlled PCR system for detection of airborne microorganisms
    • Usachev EV, Agranovski IE. 2012. Internally controlled PCR system for detection of airborne microorganisms. J. Environ. Monit. 14:1631-1637. http://dx.doi.org/10.1039/c2em30019b.
    • (2012) J. Environ. Monit , vol.14 , pp. 1631-1637
    • Usachev, E.V.1    Agranovski, I.E.2
  • 29
    • 84867502948 scopus 로고    scopus 로고
    • Evaluation of two multiplex real-time PCR screening capabilities for the detection of B.anthracis, F. tularensis, and Y. pestis in blood samples generated from murine infection models
    • Weller SA, Cox V, Essex-Lopresti A, Hartley MG, Parsons TM, Rachwal PA, Stapleton HL, Lukaszewski RA. 2012. Evaluation of two multiplex real-time PCR screening capabilities for the detection of B. anthracis, F. tularensis, and Y. pestis in blood samples generated from murine infection models. J. Med. Microbiol. 61:1546-1555. http://dx.doi.org/10.1099/jmm.0.049007-0.
    • (2012) J. Med. Microbiol , vol.61 , pp. 1546-1555
    • Weller, S.A.1    Cox, V.2    Essex-Lopresti, A.3    Hartley, M.G.4    Parsons, T.M.5    Rachwal, P.A.6    Stapleton, H.L.7    Lukaszewski, R.A.8
  • 30
    • 57349085019 scopus 로고    scopus 로고
    • Identification of a surrogate marker for infection in the African green monkey model of inhalation anthrax
    • Rossi CA, Ulrich M, Norris S, Reed DS, Pitt LM, Leffel EK. 2008. Identification of a surrogate marker for infection in the African green monkey model of inhalation anthrax. Infect. Immun. 76:5790-5801. http://dx.doi.org/10.1128/IAI.00520-08.
    • (2008) Infect. Immun , vol.76 , pp. 5790-5801
    • Rossi, C.A.1    Ulrich, M.2    Norris, S.3    Reed, D.S.4    Pitt, L.M.5    Leffel, E.K.6
  • 31
    • 74249111651 scopus 로고    scopus 로고
    • A study of PCR inhibition mechanisms using real-time PCR
    • Opel KL, Chung D, McCord BR. 2010. A study of PCR inhibition mechanisms using real-time PCR. J. Forensic Sci. 55:25-33. http://dx.doi.org/10.1111/j.1556-4029.2009.01245.x.
    • (2010) J. Forensic Sci , vol.55 , pp. 25-33
    • Opel, K.L.1    Chung, D.2    McCord, B.R.3
  • 32
    • 84881127665 scopus 로고    scopus 로고
    • Comparative evaluation of published real-time PCR assays for the detection of malaria following MIQE guidelines
    • Alemayehu S, Feghali KC, Cowden J, Komisar J, Ockenhouse CF, Kamau E. 2013. Comparative evaluation of published real-time PCR assays for the detection of malaria following MIQE guidelines. Malar. J. 12:277. http://dx.doi.org/10.1186/1475-2875-12-277.
    • (2013) Malar. J , vol.12 , pp. 277
    • Alemayehu, S.1    Feghali, K.C.2    Cowden, J.3    Komisar, J.4    Ockenhouse, C.F.5    Kamau, E.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.