Internally controlled PCR system for detection of airborne microorganisms

Journal of Environmental Monitoring

Volumn 14, Issue 6, 2012, Pages 1631-1637

  Usachev, Evgeny V ^a   Agranovski, Igor E ^a  

^a GRIFFITH UNIVERSITY   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

FLUORESCENT DYE;

AIRBORNE MICROORGANISM; ARTICLE; BACTERIOPHAGE; GENE AMPLIFICATION; MICROORGANISM DETECTION; NONHUMAN; PRIORITY JOURNAL; QUALITY CONTROL; REAL TIME POLYMERASE CHAIN REACTION; TECHNOLOGY; AEROSOL; AIR POLLUTANT; ENVIRONMENTAL MONITORING; INSTRUMENTATION; METHODOLOGY; MICROBIOLOGICAL EXAMINATION; MICROBIOLOGY;

ENTEROBACTERIA PHAGE FD;

AEROSOLS; AIR MICROBIOLOGY; AIR POLLUTANTS; ENVIRONMENTAL MONITORING; MICROBIOLOGICAL TECHNIQUES; REAL-TIME POLYMERASE CHAIN REACTION;

EID: 84864313787     PISSN: 14640325     EISSN: 14640333     Source Type: Journal    
DOI: 10.1039/c2em30019b     Document Type: Article

References (27)

1. Y. He J. Dai Y. F. Li Simultaneous and rapid detection of enteric pathogens from raw milk by multiplex PCR World J. Microbiol. Biotechnol. 2011 27 11 2597 2602
2. P. Leonard S. Hearty J. Brennan et al., Advances in biosensors for detection of pathogens in food and water Enzyme Microb. Technol. 2003 32 3 13 (Pubitemid 35447737)
3. K. M. E. Emde H. Z. Mao G. R. Finch Detection and occurrence of waterborne bacterial and viral pathogens Water Environ. Res. 1992 64 4 641 647
4. J. Theron J. Cilliers M. Du Preez V. S. Brozel S. N. Venter Detection of toxigenic Vibrio cholerae from environmental water samples by an enrichment broth cultivation-pit-stop semi-nested PCR procedure J. Appl. Microbiol. 2000 89 3 539 546
5. R. M. Atlas Legionella: from environmental habitats to disease pathology, detection and control Environ. Microbiol. 1999 1 4 283 293
6. D. Wiemer U. Loderstaedt H. von Wulffen S. Priesnitz M. Fischer E. Tannich R. M. Hagen Real-time multiplex PCR for simultaneous detection of Campylobacter jejuni, Salmonella, Shigella and Yersinia species in fecal samples Int. J. Med. Microbiol. 2011 301 7 577 584
7. B. J. Hindson A. J. Makarewicz U. S. Setlur B. D. Henderer M. T. McBride J. M. Dzenitis APDS: the autonomous pathogen detection system Biosens. Bioelectron. 2005 20 1925 1931 (Pubitemid 40312086)
8. D. V. Lim J. M. Simpson E. A. Kearns M. F. Kramer Current and developing technologies for monitoring agents of bioterrorism and biowarfare Clin. Microbiol. Rev. 2005 18 4 583 607 (Pubitemid 41504507)
9. J. A. Higgins S. Nasarabadi J. S. Karns D. R. Shelton M. Cooper A. Gbakima R. P. Koopman A handheld real time thermal cycler for bacterial pathogen detection Biosens. Bioelectron. 2003 18 1115 1123 (Pubitemid 36638662)
10. O. Lazcka F. J. Del Campo F. X. Munoz Pathogen detection: a perspective of traditional methods and biosensors Biosens. Bioelectron. 2007 22 1205 1217 (Pubitemid 46138081)
11. C. J. Elkin S. B. Brown S. N. Nasarabadi R. G. Langlois F. P. Milanovich B. W. Colston, Jr. A reusable flow-through polymerase chain reaction instrument for the continuous monitoring of infectious biological agents Anal. Chem. 2003 75 3446 3450 (Pubitemid 36871234)
12. P. Belgrader S. Young B. Yuan M. Primeau L. A. Christel F. Pourahmadi M. A. Northrup A battery-powered notebook thermal cycler for rapid multiplex real-time PCR analysis Anal. Chem. 2001 73 2 286 289 (Pubitemid 32061842)
13. P. Neuzil L. Novak J. Pipper S. Lee L. F. Ng C. Zhang Rapid detection of viral RNA by a pocket-size real-time PCR system Lab Chip 2010 10 19 2632 2634
14. F. L. Kiechle C. A. Holland Point-of-care testing and molecular diagnostics: miniaturization required Clin. Lab. Med. 2009 29 555 560
15. S. A. Grinshpun K. Willeke V. Ulevicius A. Juozaitis S. Terzieva J. Donnelly G. N. Stelma K. P. Brenner Effect of impaction, bounce and reaerosolization on collection efficiency of impingers Aerosol Sci. Technol. 1997 26 326 342 (Pubitemid 27154684)
16. I. E. Agranovski V. Agranovski S. Grinshpun T. Reponen K. Willeke Development and evaluation of a new personal sampler for viable airborne microorganisms Atmos. Environ. 2002 36 889 898 (Pubitemid 34061862)
17. I. E. Agranovski V. Agranovski T. Reponen K. Willeke S. Grinshpun Collection of airborne microorganisms into liquid by bubbling through porous medium Aerosol Sci. Technol. 2002 36 502 509 (Pubitemid 34273188)
18. I. Agranovski A. Safatov A. Borodulin O. Pyankov V. Petrishchenko A. A. Sergeev A. N. Sergeev V. Agranovski S. Grinshpun New personal sampler for viable airborne viruses; feasibility study J. Aerosol Sci. 2005 36 609 617 (Pubitemid 40603581)
19. O. Pyankov I. E. Agranovski O. Pyankova E. Mokhonova V. Mokhonov A. S. Safatov A. A. Khromykh Using a bioaerosol personal sampler in combination with real-time PCR analysis for rapid detection of airborne viruses Environ. Microbiol. 2007 9 4 992 1000 (Pubitemid 46397096)
20. L. J. Hartman S. R. Coyne D. A. Norwood Development of a novel internal positive control for Taqman based assays Mol. Cell. Probes 2005 19 51 59 (Pubitemid 40093534)
21. A. Hata H. Katayama M. Kitajima C. Visvanathan C. Nol H. Furumai Validation of internal controls for extraction and amplification of nucleic acids from enteric viruses in water samples Appl. Environ. Microbiol. 2011 77 4336 4343
22. J. Hoorfar N. Cook B. Malorny M. Wagner M. D. De A. Abdulmawjood P. Fach Diagnostic PCR: making internal amplification control mandatory Lett. Appl. Microbiol. 2004 38 79 80 (Pubitemid 38230609)
23. B. Malorny E. Paccassoni P. Fach C. Bunge A. Martin R. Helmuth Diagnostic real-time PCR for detection of Salmonella in food Appl. Environ. Microbiol. 2004 70 7046 7052 (Pubitemid 39643767)
24. J. L. Nordstrom M. C. Vickery G. M. Blackstone S. L. Murray A. DePaola Development of a multiplex realtime PCR assay with an internal amplification control for the detection of total and pathogenic Vibrio parahaemolyticus bacteria in oysters Appl. Environ. Microbiol. 2007 73 5840 5847 (Pubitemid 47462996)
25. I. Oikonomou K. Halatsi A. Kyriacou Selective PCR: a novel internal amplification control strategy for enhanced sensitivity in Salmonella diagnosis Lett. Appl. Microbiol. 2008 46 456 461 (Pubitemid 351422521)
26. Short Protocols in Molecular Biology, ed., F. M. Ausubel, R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith, and, K. Struhl, John Wiley & Sons, New York, 4th edn, 1999
27. I. E. Agranovski Personal sampler for viable airborne microorganisms: main development stages Clean: Soil, Air, Water 2007 35 1 111 117 (Pubitemid 46578539)