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Volumn 42, Issue 2, 2004, Pages 601-609

Smallpox and pan-Orthopox Virus Detection by Real-Time 3′-Minor Groove Binder TaqMan Assays on the Roche LightCycler and the Cepheid Smart Cycler Platforms

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA; HEMAGGLUTININ; VIRUS DNA;

EID: 10744231408     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.42.2.601-609.2004     Document Type: Article
Times cited : (128)

References (34)
  • 1
    • 0030818634 scopus 로고    scopus 로고
    • Efficient priming of PCR with short oligonucleotides conjugated to a minor groove binder
    • Afonina, I., M. Zivarts, I. Kutyavin, E. Lukhtanov, H. Gamper, and R. B. Meyer. 1997. Efficient priming of PCR with short oligonucleotides conjugated to a minor groove binder. Nucleic Acids Res. 25:2657-2660.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 2657-2660
    • Afonina, I.1    Zivarts, M.2    Kutyavin, I.3    Lukhtanov, E.4    Gamper, H.5    Meyer, R.B.6
  • 2
    • 0036219399 scopus 로고    scopus 로고
    • Minor groove binder-conjugated DNA probes for quantitative DNA detection by hybridization-triggered fluorescence
    • Afonina, I. A., M. W. Reed, E. Lusby, I. G. Shishkina, and Y. S. Belousov. 2002. Minor groove binder-conjugated DNA probes for quantitative DNA detection by hybridization-triggered fluorescence. BioTechniques 32:940-949.
    • (2002) BioTechniques , vol.32 , pp. 940-949
    • Afonina, I.A.1    Reed, M.W.2    Lusby, E.3    Shishkina, I.G.4    Belousov, Y.S.5
  • 3
    • 0037288073 scopus 로고    scopus 로고
    • Potential antiviral therapeutics for smallpox, monkeypox, and other orthopoxvirus infections
    • Baker, R. O., M. Bray, and J. W. Huggins. 2003. Potential antiviral therapeutics for smallpox, monkeypox, and other orthopoxvirus infections. Antiviral Res. 57:13-23.
    • (2003) Antiviral Res. , vol.57 , pp. 13-23
    • Baker, R.O.1    Bray, M.2    Huggins, J.W.3
  • 4
    • 0029565858 scopus 로고
    • Vaccinia virus DNA replication: A short review
    • Beaud, G. 1995. Vaccinia virus DNA replication: a short review. Biochimie 77:774-779.
    • (1995) Biochimie , vol.77 , pp. 774-779
    • Beaud, G.1
  • 5
    • 0036211106 scopus 로고    scopus 로고
    • Rapid detection of Shiga toxin-producing bacteria in feces by multiplex PCR with molecular beacons on the Smart Cycler
    • Belanger, S. D., M. Boissinot, C. Menard, F. J. Picard, and M. G. Bergeron. 2002. Rapid detection of Shiga toxin-producing bacteria in feces by multiplex PCR with molecular beacons on the Smart Cycler. J. Clin. Microbiol. 40:1436-1440.
    • (2002) J. Clin. Microbiol. , vol.40 , pp. 1436-1440
    • Belanger, S.D.1    Boissinot, M.2    Menard, C.3    Picard, F.J.4    Bergeron, M.G.5
  • 6
    • 0034999808 scopus 로고    scopus 로고
    • The threat of smallpox and bioterrorism
    • Berche, P. 2001. The threat of smallpox and bioterrorism. Trends Microbiol. 9:15-18.
    • (2001) Trends Microbiol. , vol.9 , pp. 15-18
    • Berche, P.1
  • 7
    • 0037171704 scopus 로고    scopus 로고
    • Diagnosis and management of smallpox
    • Breman, J. G., and D. A. Henderson. 2002. Diagnosis and management of smallpox. N. Engl. J. Med. 346:1300-1308.
    • (2002) N. Engl. J. Med. , vol.346 , pp. 1300-1308
    • Breman, J.G.1    Henderson, D.A.2
  • 9
    • 0036307397 scopus 로고    scopus 로고
    • Detection of vaccinia virus, herpes simplex virus, varicella-zoster virus, and Bacillus anthracis DNA by LightCycler polymerase chain reaction after autoclaving: Implications for biosafety of bioterrorism agents
    • Espy, M. J., J. R. Uhl, L. M. Sloan, J. E. Rosenblatt, F. R. Cockerill III, and T. F. Smith. 2002. Detection of vaccinia virus, herpes simplex virus, varicella-zoster virus, and Bacillus anthracis DNA by LightCycler polymerase chain reaction after autoclaving: implications for biosafety of bioterrorism agents. Mayo Clin. Proc. 77:624-628.
    • (2002) Mayo Clin. Proc. , vol.77 , pp. 624-628
    • Espy, M.J.1    Uhl, J.R.2    Sloan, L.M.3    Rosenblatt, J.E.4    Cockerill III, F.R.5    Smith, T.F.6
  • 10
    • 0037129541 scopus 로고    scopus 로고
    • Evaluation of the portable Cepheid SmartCycler real-time PCR machine for the rapid diagnosis of foot-and-mouth disease
    • Hearps, A., Z. Zhang, and S. Alexandersen. 2002. Evaluation of the portable Cepheid SmartCycler real-time PCR machine for the rapid diagnosis of foot-and-mouth disease. Vet. Rec. 150:625-628.
    • (2002) Vet. Rec. , vol.150 , pp. 625-628
    • Hearps, A.1    Zhang, Z.2    Alexandersen, S.3
  • 11
    • 0003535877 scopus 로고    scopus 로고
    • Evaluation of polymerase chain reaction assays for the identifying biological agents
    • P. J. Stoppa and M. Bartoszcze (ed.). Kluwer Academic Publishing, Amsterdam, The Netherlands
    • Henchal, E. A., and M. S. Ibrahim. 2003. Evaluation of polymerase chain reaction assays for the identifying biological agents, p. 239-249. In P. J. Stoppa and M. Bartoszcze (ed.), Rapid methods for analysis of biological materials in the environment. Kluwer Academic Publishing, Amsterdam, The Netherlands.
    • (2003) Rapid Methods for Analysis of Biological Materials in the Environment , pp. 239-249
    • Henchal, E.A.1    Ibrahim, M.S.2
  • 14
    • 0025861818 scopus 로고
    • Detection of specific polymerase chain reaction product by utilizing the 5′-3′ exonuclease activity of Thermus aquaticus DNA polymerase
    • Holland, P. M., R. D. Abramson, R. Watson, and D. H. Gelfand. 1991. Detection of specific polymerase chain reaction product by utilizing the 5′-3′ exonuclease activity of Thermus aquaticus DNA polymerase. Proc. Natl. Acad. Sci. USA 88:7276-7280.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 7276-7280
    • Holland, P.M.1    Abramson, R.D.2    Watson, R.3    Gelfand, D.H.4
  • 15
    • 0025964915 scopus 로고
    • Vaccinia virus homologues of the Shope fibroma virus inverted terminal repeat proteins and a discontinuous ORF related to the tumor necrosis factor receptor family
    • Howard, S. T., Y. S. Chan, and G. L. Smith. 1991. Vaccinia virus homologues of the Shope fibroma virus inverted terminal repeat proteins and a discontinuous ORF related to the tumor necrosis factor receptor family. Virology 180:633-647.
    • (1991) Virology , vol.180 , pp. 633-647
    • Howard, S.T.1    Chan, Y.S.2    Smith, G.L.3
  • 16
    • 0031128082 scopus 로고    scopus 로고
    • The potential of 5′ nuclease PCR for detecting a single-base polymorphism in Orthopoxvirus
    • Ibrahim, M. S., J. J. Esposito, P. B. Jahrling, and R. S. Lofts. 1997. The potential of 5′ nuclease PCR for detecting a single-base polymorphism in Orthopoxvirus. Mol. Cell Probes. 11:143-147.
    • (1997) Mol. Cell Probes , vol.11 , pp. 143-147
    • Ibrahim, M.S.1    Esposito, J.J.2    Jahrling, P.B.3    Lofts, R.S.4
  • 19
    • 0034825337 scopus 로고    scopus 로고
    • Applying molecular biological techniques to detecting biological agents
    • Krafft, A. E., and D. A. Kulesh. 2001. Applying molecular biological techniques to detecting biological agents. Clin. Lab Med. 21:631-660.
    • (2001) Clin. Lab. Med. , vol.21 , pp. 631-660
    • Krafft, A.E.1    Kulesh, D.A.2
  • 21
    • 0027291689 scopus 로고
    • Allelic discrimination by nick-translation PCR with fluorogenic probes
    • Lee, L. G., C. R. Connell, and W. Bloch. 1993. Allelic discrimination by nick-translation PCR with fluorogenic probes. Nucleic Acids Res. 21:3761-3766.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 3761-3766
    • Lee, L.G.1    Connell, C.R.2    Bloch, W.3
  • 22
    • 0035175474 scopus 로고    scopus 로고
    • Detection and differentiation of Old World orthopoxviruses: Restriction fragment length polymorphism of the crmB gene region
    • Loparev, V. N., R. F. Massung, J. J. Esposito, and H. Meyer. 2001. Detection and differentiation of Old World orthopoxviruses: restriction fragment length polymorphism of the crmB gene region. J. Clin. Microbiol. 39:94-100.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 94-100
    • Loparev, V.N.1    Massung, R.F.2    Esposito, J.J.3    Meyer, H.4
  • 26
    • 0036482804 scopus 로고    scopus 로고
    • Amplification of 'variola virus-specific' sequences in German cowpox virus isolates
    • Meyer, H., H. Neubauer, and M. Pfeffer. 2002. Amplification of 'variola virus-specific' sequences in German cowpox virus isolates. J. Vet. Med. B 49:17-19.
    • (2002) J. Vet. Med. B , vol.49 , pp. 17-19
    • Meyer, H.1    Neubauer, H.2    Pfeffer, M.3
  • 27
    • 0028021707 scopus 로고
    • Sequence alterations within and downstream of the A-type inclusion protein genes allow differentiation of Orthopoxvirus species by polymerase chain reaction
    • Meyer, H., M. Pfeffer, and H. J. Rziha. 1994. Sequence alterations within and downstream of the A-type inclusion protein genes allow differentiation of Orthopoxvirus species by polymerase chain reaction. J. Gen. Virol. 75:1975-1981.
    • (1994) J. Gen. Virol. , vol.75 , pp. 1975-1981
    • Meyer, H.1    Pfeffer, M.2    Rziha, H.J.3
  • 28
    • 0030747434 scopus 로고    scopus 로고
    • Specific detection of mouse-pox virus by polymerase chain reaction
    • Neubauer, H., M. Pfeffer, and H. Meyer. 1997. Specific detection of mouse-pox virus by polymerase chain reaction. Lab Anim. 31:201-205.
    • (1997) Lab Anim. , vol.31 , pp. 201-205
    • Neubauer, H.1    Pfeffer, M.2    Meyer, H.3
  • 30
    • 0036211821 scopus 로고    scopus 로고
    • The vaccinia virus B9R protein is a 6 kDa intracellular protein that is non-essential for virus replication and virulence
    • Price, N., D. C. Tscharke, and G. L. Smith. 2002. The vaccinia virus B9R protein is a 6 kDa intracellular protein that is non-essential for virus replication and virulence. J. Gen. Virol. 83:873-878.
    • (2002) J. Gen. Virol. , vol.83 , pp. 873-878
    • Price, N.1    Tscharke, D.C.2    Smith, G.L.3
  • 31
    • 0029014391 scopus 로고
    • PCR strategy for identification and differentiation of smalllpox and other orthopoxviruses
    • Ropp, S. L., Q. Jin, J. C. Knight, R. F. Massung, and J. J. Esposito. 1995. PCR strategy for identification and differentiation of smalllpox and other orthopoxviruses. J. Clin. Microbiol. 33:2069-2076.
    • (1995) J. Clin. Microbiol. , vol.33 , pp. 2069-2076
    • Ropp, S.L.1    Jin, Q.2    Knight, J.C.3    Massung, R.F.4    Esposito, J.J.5
  • 32
    • 0036239724 scopus 로고    scopus 로고
    • Characterization of wild-type and cidofovir-resistant strains of camelpox, cowpox, monkeypox, and vaccinia viruses
    • Smee, D. F., R. W. Sidwell, D. Kefauver, M. Bray, and J. W. Huggins. 2002. Characterization of wild-type and cidofovir-resistant strains of camelpox, cowpox, monkeypox, and vaccinia viruses. Antimicrob. Agents Chemother. 46:1329-1335.
    • (2002) Antimicrob. Agents Chemother. , vol.46 , pp. 1329-1335
    • Smee, D.F.1    Sidwell, R.W.2    Kefauver, D.3    Bray, M.4    Huggins, J.W.5
  • 33
    • 0036303878 scopus 로고    scopus 로고
    • Application of rapid-cycle real-time polymerase chain reaction for the detection of microbial pathogens: The Mayo-Roche rapid anthrax test
    • Uhl, J. R., C. A. Bell, L. M. Sloan, M. J. Espy, T. F. Smith, J. E. Rosenblatt, and F. R. Cockerill III. 2002. Application of rapid-cycle real-time polymerase chain reaction for the detection of microbial pathogens: the Mayo-Roche rapid anthrax test. Mayo Clin. Proc. 77:673-680.
    • (2002) Mayo Clin. Proc. , vol.77 , pp. 673-680
    • Uhl, J.R.1    Bell, C.A.2    Sloan, L.M.3    Espy, M.J.4    Smith, T.F.5    Rosenblatt, J.E.6    Cockerill III, F.R.7
  • 34
    • 0035206041 scopus 로고    scopus 로고
    • The pathology of experimental aerosolized monkeypox virus infection in cynomolgus monkeys (Macaca fascicularis)
    • Zaucha, G. M., P. B. Jahrling, T. W. Geishert, J. R. Swearengen, and L. Hensley. 2001. The pathology of experimental aerosolized monkeypox virus infection in cynomolgus monkeys (Macaca fascicularis). Lab Investig. 81:1581-1600.
    • (2001) Lab Investig. , vol.81 , pp. 1581-1600
    • Zaucha, G.M.1    Jahrling, P.B.2    Geishert, T.W.3    Swearengen, J.R.4    Hensley, L.5


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