메뉴 건너뛰기




Volumn , Issue , 2013, Pages 3646-3651

Stochastic simulation of enzymatic reactions under transcriptional feedback regulation

Author keywords

[No Author keywords available]

Indexed keywords

ENZYMES; FEEDBACK; GENE EXPRESSION; MARKOV PROCESSES; METABOLISM; STOCHASTIC CONTROL SYSTEMS; STOCHASTIC MODELS;

EID: 84893316803     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.23919/ecc.2013.6669756     Document Type: Conference Paper
Times cited : (4)

References (20)
  • 1
    • 0004277661 scopus 로고    scopus 로고
    • ser. Frontiers in Metabolism 2, K. Snell, Ed. Portland Press, London
    • D. Fell, Understanding the Control of Metabolism, ser. Frontiers in Metabolism 2, K. Snell, Ed. Portland Press, London, 1997.
    • (1997) Understanding the Control of Metabolism
    • Fell, D.1
  • 3
    • 84859471521 scopus 로고    scopus 로고
    • Regulatory architecture determines optimal regulation of gene expression in metabolic pathways
    • V. Chubukov, I. Zuleta, and H. Li, "Regulatory architecture determines optimal regulation of gene expression in metabolic pathways, " Proceedings of the National Academy of Sciences, vol. 109, no. 13, pp. 5127-5132, 2012.
    • (2012) Proceedings of the National Academy of Sciences , vol.109 , Issue.13 , pp. 5127-5132
    • Chubukov, V.1    Zuleta, I.2    Li, H.3
  • 4
    • 82955189261 scopus 로고    scopus 로고
    • Importance of metabolic coupling for the dynamics of gene expression following a diauxic shift in escherichia coli
    • V. Baldazzi, et al., "Importance of metabolic coupling for the dynamics of gene expression following a diauxic shift in Escherichia coli." Journal of theoretical biology, vol. 295, pp. 100-115, 2012.
    • (2012) Journal of Theoretical Biology , vol.295 , pp. 100-115
    • Baldazzi, V.1
  • 5
    • 77949385752 scopus 로고    scopus 로고
    • Bacterial adaptation through distributed sensing of metabolic fluxes
    • O. Kotte, J. B. Zaugg, and M. Heinemann, "Bacterial adaptation through distributed sensing of metabolic fluxes, " Mol Syst Biol, vol. 6, no. 355, 2010.
    • (2010) Mol Syst Biol , vol.6 , Issue.355
    • Kotte, O.1    Zaugg, J.B.2    Heinemann, M.3
  • 6
    • 54249116230 scopus 로고
    • Genetic regulatory mechanisms in the synthesis of proteins
    • June
    • F. Jacob and J. Monod, "Genetic regulatory mechanisms in the synthesis of proteins, " Journal of Molecular Biology, vol. 3, no. 3, pp. 318-356, June 1961.
    • (1961) Journal of Molecular Biology , vol.3 , Issue.3 , pp. 318-356
    • Jacob, F.1    Monod, J.2
  • 7
    • 0016842645 scopus 로고
    • New features of the regulation of the tryptophan operon
    • K. Bertrand, et al., "New features of the regulation of the tryptophan operon, " Science, vol. 189, no. 4196, pp. 22-26, 1975.
    • (1975) Science , vol.189 , Issue.4196 , pp. 22-26
    • Bertrand, K.1
  • 8
    • 2442526837 scopus 로고    scopus 로고
    • Just-in-time transcription program in metabolic pathways
    • May
    • A. Zaslaver, et al., "Just-in-time transcription program in metabolic pathways, " Nature Genetics, vol. 36, no. 5, pp. 486-491, May 2004.
    • (2004) Nature Genetics , vol.36 , Issue.5 , pp. 486-491
    • Zaslaver, A.1
  • 9
    • 84859633048 scopus 로고    scopus 로고
    • Design of a dynamic sensorregulator system for production of chemicals and fuels derived from fatty acids
    • F. Zhang, J. Carothers, and J. Keasling, "Design of a dynamic sensorregulator system for production of chemicals and fuels derived from fatty acids, " Nature biotechnology, vol. 30, no. 4, pp. 354-359, 2012.
    • (2012) Nature Biotechnology , vol.30 , Issue.4 , pp. 354-359
    • Zhang, F.1    Carothers, J.2    Keasling, J.3
  • 10
    • 84871347056 scopus 로고    scopus 로고
    • Synthetic gene circuits for metabolic control: Design trade-offs and constraints
    • Oct
    • D. A. Oyarzun and G.-B. V. Stan, "Synthetic gene circuits for metabolic control: design trade-offs and constraints, " Journal of The Royal Society Interface, Oct. 2012.
    • (2012) Journal of the Royal Society Interface
    • Oyarzun, D.A.1    Stan, G.-B.V.2
  • 11
    • 0037119587 scopus 로고    scopus 로고
    • Stochastic gene expression in a single cell
    • (New York, N.Y.), Aug
    • M. B. Elowitz, et al., "Stochastic gene expression in a single cell." Science (New York, N.Y.), vol. 297, no. 5584, pp. 1183-6, Aug. 2002.
    • (2002) Science , vol.297 , Issue.5584 , pp. 1183-1186
    • Elowitz, M.B.1
  • 12
    • 15544388848 scopus 로고    scopus 로고
    • Noise propagation in gene networks
    • (New York, N.Y.), Mar
    • J. M. Pedraza and A. van Oudenaarden, "Noise propagation in gene networks." Science (New York, N.Y.), vol. 307, no. 5717, pp. 1965-9, Mar. 2005.
    • (2005) Science , vol.307 , Issue.5717 , pp. 1965-1969
    • Pedraza, J.M.1    Van Oudenaarden, A.2
  • 13
    • 20344389483 scopus 로고    scopus 로고
    • Models of stochastic gene expression
    • , June
    • J. Paulsson, "Models of stochastic gene expression, " Physics of Life Reviews, vol. 2, no. 2, pp. 157-175, June 2005.
    • (2005) Physics of Life Reviews , vol.2 , Issue.2 , pp. 157-175
    • Paulsson, J.1
  • 14
    • 33645429016 scopus 로고
    • Exact stochastic simulation of coupled chemical reactions
    • D. Gillespie, "Exact stochastic simulation of coupled chemical reactions, " The journal of physical chemistry, vol. 81, no. 25, pp. 2340- 2361, 1977.
    • (1977) The Journal of Physical Chemistry , vol.81 , Issue.25 , pp. 2340-2361
    • Gillespie, D.1
  • 15
    • 33846185710 scopus 로고    scopus 로고
    • Accelerated stochastic simulation of the stiff enzyme-substrate reaction
    • Y. Cao, D. Gillespie, and L. Petzold, "Accelerated stochastic simulation of the stiff enzyme-substrate reaction, " The Journal of chemical physics, vol. 123, p. 144917, 2005.
    • (2005) The Journal of Chemical Physics , vol.123 , pp. 144917
    • Cao, Y.1    Gillespie, D.2    Petzold, L.3
  • 16
    • 33845629747 scopus 로고    scopus 로고
    • Solving the chemical master equation for monomolecular reaction systems analytically
    • Jan
    • T. Jahnke and W. Huisinga, "Solving the chemical master equation for monomolecular reaction systems analytically." Journal of mathematical biology, vol. 54, no. 1, pp. 1-26, Jan. 2007.
    • (2007) Journal of Mathematical Biology , vol.54 , Issue.1 , pp. 1-26
    • Jahnke, T.1    Huisinga, W.2
  • 18
    • 44349162752 scopus 로고    scopus 로고
    • Transcriptome-wide noise controls lineage choice in mammalian progenitor cell
    • May
    • H. H. Chang, et al., "Transcriptome-wide noise controls lineage choice in mammalian progenitor cells." Nature, vol. 453, no. 7194, pp. 544-7, May 2008.
    • (2008) S, Nature , vol.453 , Issue.7194 , pp. 544-547
    • Chang, H.H.1
  • 19
    • 0037078982 scopus 로고    scopus 로고
    • Control, exploitation and tolerance of intracellular noise
    • Nov
    • C. V. Rao, D. M. Wolf, and A. P. Arkin, "Control, exploitation and tolerance of intracellular noise, " Nature, vol. 420, no. 6912, pp. 231-7, Nov. 2002.
    • (2002) Nature , vol.420 , Issue.6912 , pp. 231-237
    • Rao, C.V.1    Wolf, D.M.2    Arkin, A.P.3
  • 20
    • 84863825902 scopus 로고    scopus 로고
    • Influence of the feedback loops in the¡ i¿ trp¡/i¿ operon of¡ i¿ b. Subtilis¡/i¿ on the system dynamic response and noise amplitude
    • C. Zamora-Chimal, M. Santillan, and J. Rodriguez-Gonzalez, "Influence of the feedback loops in the¡ i¿ trp¡/i¿ operon of¡ i¿ b. subtilis¡/i¿ on the system dynamic response and noise amplitude, " Journal of Theoretical Biology, 2012.
    • (2012) Journal of Theoretical Biology
    • Zamora-Chimal, C.1    Santillan, M.2    Rodriguez-Gonzalez, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.