Real time loop-mediated isothermal amplification using a portable fluorescence scanner for rapid and simple detection of Vibrio parahaemolyticus

Food Control

Volumn 41, Issue 1, 2014, Pages 91-95

  Yi, MinYing ^a   Ling, Li ^a   Neogi, Sucharit B ^c,d   Fan, YaoSen ^b   Tang, DaYun ^b   Yamasaki, Shinji ^c   Shi, Lei ^b,e   Ye, Lei ^b,e  

^a Guangdong Inspection and Quarantine Technology Center   (China)

^b SOUTH CHINA UNIVERSITY OF TECHNOLOGY   (China)

^c Osaka Prefecture University   (Japan)

^d INTERNATIONAL CENTRE FOR DIARRHOEAL DISEASE RESEARCH   (Bangladesh)

^e Guangzhou DE AOU Biotechnology Technology Co Ltd   (China)

Author keywords

API 20E system; ESE Quant tube scanner; Real time LAMP; Real time PCR; Vibrio parahaemolyticus

Indexed keywords

EID: 84893030472     PISSN: 09567135     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.foodcont.2014.01.005     Document Type: Article

References (19)

1. Al-Mouqati S., Azad I., Al-Baijan D., Benhaji A. Vibrio detection in market seafood samples of Kuwait by biochemical (API 20E) strips and its evaluation against 16s rDNA-based molecular methods. Research Journal of BioTechnology 2012, 7:63-69.
2. Bej A.K., Patterson D.P., Brasher C.W., Vickery M.C.L., Jones D.D., Kaysner C.A. Detection of total and hemolysin-producing Vibrio parahaemolyticus in shellfish using multiplex PCR amplification of tl, tdh and trh. Journal of Microbiological Methods 1999, 36:215-225.
3. Chen S., Ge B. Development of a toxR-based loop-mediated isothermal amplification assay for detecting Vibrio parahaemolyticus. BMC Microbiology 2010, 10:41.
4. FAO Risk assessment of Vibrio parahaemolyticus in seafood 2011, Accessed 04.01.14. http://www.who.int/foodsafety/publications/micro/MRA_16_JEMRA.pdf.
5. Kaneko H., Iida T., Aoki K., Ohno S., Suzutani T. Sensitive and rapid detection of herpes simplex virus and varicella-zoster virus DNA by loop-mediated isothermal amplification. Journal of Clinical Microbiology 2005, 43:3290-3296.
6. Lucchi N.W., Demas A., Narayanan J., Sumari D., Kabanywanyi A., Kachur S.P., et al. Real-time fluorescence loop mediated isothermal amplification for the diagnosis of malaria. PLoS One 2010, 5:e13733.
7. Martinez-Urtaza J., Lozano-Leon A., Viña-Feas A., Novoa J., Garcia-Martin O. Differences in the API 20E biochemical patterns of clinical and environmental Vibrio parahaemolyticus isolates. FEMS Microbiology Letters 2006, 255:75-81.
8. Nair G.B., Ramamurthy T., Bhattacharya S.K., Dutta B., Takeda Y., Sack D.A. Global dissemination of Vibrio parahaemolyticus serotype O3:K6 and its serovariants. Clinical Microbiology Reviews 2007, 20:39-48.
9. Neogi S.B., Chowdhury N., Asakura M., Hinenoya A., Haldar S., Saidi S.M., et al. Ahighly sensitive and specific multiplex PCR assay for simultaneous detection of Vibrio cholerae, Vibrio parahaemolyticus and Vibrio vulnificus. Letters in Applied Microbiology 2010, 51:293-300.
10. Njiru Z.K., Yeboah-Manu D., Stinear T.P., Fyfe J.A.M. Rapid and sensitive detection of Mycobacterium ulcerans using a Loop-Mediated Isothermal Amplification test. Journal of Clinical Microbiology 2012, 50:1737-1741.
11. Nordstrom J.L., Vickery M.C.L., Blackstone G.M., Murray S.L., DePaola A. Development of a multiplex real-time PCR assay with an internal amplification control for the detection of total and pathogenic Vibrio parahaemolyticus bacteria in oysters. Applied and Environmental Microbiology 2007, 73:5840-5847.
12. Notomi T., Okayama H., Masubuchi H., Yonekawa T., Watanabe K., Amino N., et al. Loop-mediated isothermal amplification of DNA. Nucleic Acids Research 2000, 28:e63.
13. Shan X., Zhang Y., Zhang Z., Chen M., Su Y., Yuan Y., et al. Rapid detection of food-borne Listeria monocytogenes by real-time quantitative loop-mediated isothermal amplification. Food Science and Biotechnology 2012, 21:101-106.
14. Shinoda S., Matsuoka H., Tsuchie T., Miyoshi S.I., Yamamoto S., Taniguchi H., et al. Purification and characterization of a lecithin-dependent haemolysin from Escherichia coli transformed by a Vibrio parahaemolyticus gene. Journal of General Microbiology 1991, 137:2705-2711.
15. Su Y.C., Liu C. Vibrio parahaemolyticus: a concern of seafood safety. Food Microbiology 2007, 24:549-558.
16. Venkateswaran K., Dohmoto N., Harayama S. Cloning and nucleotide sequence of the gyrB gene of Vibrio parahaemolyticus and its application in detection of this pathogen in shrimp. Applied and Environmental Microbiology 1998, 64:681-687.
17. Vugia D., Cronquist A., Cartter M., Tobin-D'Angelo M., Blythe D., Smith K., et al. Preliminary foodnet data on the incidence of infection with pathogens transmitted commonly through food 10 states 2008. Morbidity and Mortality Weekly Report 2009, 58:333-337.
18. Waldor M.K., Mekalanos J.J. Lysogenic conversion by a filamentous phage encoding cholera toxin. Science 1996, 272:1910-1914.
19. Yamazaki W., Ishibashi M., Kawahara R., Inoue K. Development of a loop-mediated isothermal amplification assay for sensitive and rapid detection of Vibrio parahaemolyticus. BMC Microbiology 2008, 8:163.