Development of a loop-mediated Isothermal amplification assay for sensitive and rapid detection of Vibrio parahaemolyticus

BMC Microbiology

Volumn 8, Issue , 2008, Pages

  Yamazaki, Wataru ^a   Ishibashi, Masanori ^a   Kawahara, Ryuji ^a   Inoue, Kiyoshi ^a  

^a OSAKA PREFECTURAL INSTITUTE OF PUBLIC HEALTH   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIAL STRAIN; BACTERIUM DETECTION; CONTROLLED STUDY; DNA EXTRACTION; FOOD CONTAMINATION; NONHUMAN; POLYMERASE CHAIN REACTION; SEA FOOD; VIBRIO PARAHAEMOLYTICUS; BACTERIUM IDENTIFICATION; CLASSIFICATION; FOOD CONTROL; GENETICS; GRAM NEGATIVE INFECTION; HUMAN; ISOLATION AND PURIFICATION; MICROBIOLOGY; SENSITIVITY AND SPECIFICITY; SHELLFISH;

DECAPODA (CRUSTACEA); VIBRIO; VIBRIO PARAHAEMOLYTICUS;

BACTERIAL TOXIN; HEMOLYSIN; THERMOSTABLE DIRECT HEMOLYSIN;

BACTERIAL TOXINS; BACTERIAL TYPING TECHNIQUES; FOOD MICROBIOLOGY; HEMOLYSIN PROTEINS; HUMANS; POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; SHELLFISH; VIBRIO INFECTIONS; VIBRIO PARAHAEMOLYTICUS;

EID: 54449084713     PISSN: 14712180     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/1471-2180-8-163     Document Type: Article

References (19)

1. Epidemiology. SM Faruque GB Nair, The biology of Vibrios ASM press, Thompson FL, Austin B, Swings J, 2006 385 398
2. Vibrio species. M Nishibuchi A DePaola, Foodborne pathogens: Microbiology and molecular biology Horizon Scientific Press, Fratamico PM, Bhunia AK, Smith JL, 2005 251 272
3. Vibrio parahaemolyticus. T Iida KS Park T Honda, The biology of Vibrios ASM press, Thompson FL, Austin B, Swings J, 2006 340 348
4. Detection of total and hemolysin-producing Vibrio parahaemolyticus in shellfish using multiplex PCR amplification of tl, tdh and trh. AK Bej DP Patterson CW Brasher MC Vickery DD Jones CA Kaysner, J Microbiol Methods 1999 36 215 225 10.1016/S0167-7012(99)00037-8 10379807
5. Development of a multiplex real-time PCR assay with an internal amplification control for the detection of total and pathogenic Vibrio parahaemolyticus bacteria in oysters. JL Nordstrom MC Vickery GM Blackstone SL Murray A DePaola, Appl Environ Microbiol 2007 73 5840 5847 17644647 10.1128/AEM.00460-07
6. Comparison of the nucleotide sequences of the genes for the thermostable direct hemolysin and the thermolabile hemolysin from Vibrio parahaemolyticus. H Taniguchi H Hirano S Kubomura K Higashi Y Mizuguchi, Microb Pathog 1986 1 425 432 10.1016/0882-4010(86)90004-5 3508495
7. Detection of Vibrio parahaemolyticus in shellfish by use of multiplexed real-time PCR with TaqMan fluorescent probes. LN Ward AK Bej, Appl Environ Microbiol 2006 72 2031 2042 16517652 10.1128/AEM.72.3.2031-2042.2006
8. Detection of the thermostable direct hemolysin gene (tdh) and the thermostable direct hemolysin-related hemolysin gene (trh) of Vibrio parahaemolyticus by polymerase chain reaction. J Tada T Ohashi N Nishimura Y Shirasaki H Ozaki S Fukushima J Takano M Nishibuchi Y Takeda, Mol Cell Probes 1992 6 477 487 10.1016/0890-8508(92)90044-X 1480187
9. Loop-mediated isothermal amplification of DNA. T Notomi H Okayama H Masubuchi T Yonekawa K Watanabe N Amino T Hase, Nucleic Acids Res 2000 28 E63 10871386 10.1093/nar/28.12.e63
10. Eiken GENOME SITE. http://loopamp.eiken.co.jp/e/index.html
11. Accelerated reaction by loop-mediated isothermal amplification using loop primers. K Nagamine T Hase T Notomi, Mol Cell Probes 2002 16 223 229 10.1006/mcpr.2002.0415 12144774
12. Sensitive and rapid detection of vero toxin-producing Escherichia coli using loop-mediated isothermal amplification. Y Hara-Kudo J Nemoto K Ohtsuka Y Segawa K Takatori T Kojima M Ikedo, J Med Microbiol 2007 56 398 406 10.1099/jmm.0.46819-0 17314373
13. Development and evaluation of a loop-mediated isothermal amplification assay for rapid and simple detection of Campylobacter jejuni and Campylobacter coli. W Yamazaki M Taguchi M Ishibashi M Kitazato M Nukina N Misawa K Inoue, J Med Microbiol 2008 57 444 451 10.1099/jmm.0.47688-0 18349363
14. Sensitive and rapid detection of cholera toxin-producing Vibrio cholerae using a loop-mediated isothermal amplification. W Yamazaki K Seto M Taguchi M Ishibashi K Inoue, BMC Microbiol 2008 8 94 18547441 10.1186/1471-2180-8-94
15. Loop-mediated isothermal amplification for the rapid detection of Salmonella. Y Hara-Kudo M Yoshino T Kojima M Ikedo, FEMS Microbiol Lett 2005 253 155 161 10.1016/j.femsle.2005.09.032 16242860
16. Loop-mediated isothermal amplification for direct detection of Mycobacterium tuberculosis complex, M. avium, and M. intracellulare in sputum samples. T Iwamoto T Sonobe K Hayashi, J Clin Microbiol 2003 41 2616 2622 12791888 10.1128/JCM.41.6.2616-2622.2003
17. Use of a combination of brushing technique and the loop-mediated isothermal amplification method as a novel, rapid, and safe system for detection of Helicobacter pylori. M Minami M Ohta T Ohkura T Ando K Torii T Hasegawa H Goto, J Clin Microbiol 2006 44 4032 4037 17088368 10.1128/JCM.00898-06
18. Detection of Verotoxigenic Escherichia coli O157 and O26 in food by plating methods and LAMP method: a collaborative study. Y Hara-Kudo N Konishi K Ohtsuka R Hiramatsu H Tanaka H Konuma K Takatori, Int J Food Microbiol 2008 122 156 161 10.1016/j.ijfoodmicro.2007.11.078 18158196
19. Vibrio parahaemolyticus, Japan, 1996-1998. Infectious Disease Surveillance Center, Infectious Agents Surveillance Report (IASR) 1999 http://idsc.nih.go.jp/iasr/