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Volumn , Issue , 2013, Pages

GPU-accelerated molecular visualization on petascale supercomputing platforms

Author keywords

GPU; Many core; Molecular surface; Molecular visualization; Parallel rendering; Ray tracing

Indexed keywords

GPU; MANY-CORE; MOLECULAR SURFACES; MOLECULAR VISUALIZATION; PARALLEL RENDERING;

EID: 84892962345     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1145/2535571.2535595     Document Type: Conference Paper
Times cited : (46)

References (27)
  • 1
    • 74349114123 scopus 로고
    • A generalization of algebraic surface drawing
    • J. F. Blinn. A Generalization of Algebraic Surface Drawing. ACM Transactions on Graphic, 1:235-256, 1982.
    • (1982) ACM Transactions on Graphic , vol.1 , pp. 235-256
    • Blinn, J.F.1
  • 2
  • 4
    • 84875916378 scopus 로고    scopus 로고
    • A general and robust ray-casting-based algorithm for triangulating surfaces at the nanoscale
    • 04
    • S. Decherchi and W. Rocchia. A general and robust ray-casting-based algorithm for triangulating surfaces at the nanoscale. PLoS ON, 8(4):e59744, 04 2013.
    • (2013) PLoS ON , vol.8 , Issue.4
    • Decherchi, S.1    Rocchia, W.2
  • 7
    • 42949101966 scopus 로고    scopus 로고
    • GPU-based fast ray casting for a large number of metaballs
    • Y. Kanamori, Z. Szego, and T. Nishita. GPU-based fast ray casting for a large number of metaballs. Computer Graphics Foru, 27(3):351-360, 2008.
    • (2008) Computer Graphics Foru , vol.27 , Issue.3 , pp. 351-360
    • Kanamori, Y.1    Szego, Z.2    Nishita, T.3
  • 9
    • 84875929674 scopus 로고    scopus 로고
    • Fast visualization of gaussian density surfaces for molecular dynamics and particle system trajectories
    • M. Krone, J. E. Stone, T. Ertl, and K. Schulten. Fast visualization of Gaussian density surfaces for molecular dynamics and particle system trajectories. In EuroVis - Short Papers 201, pages 67-71, 2012.
    • (2012) EuroVis - Short Papers 201 , pp. 67-71
    • Krone, M.1    Stone, J.E.2    Ertl, T.3    Schulten, K.4
  • 11
    • 79952443011 scopus 로고    scopus 로고
    • Fast analysis of molecular dynamics trajectories with graphics processing units-radial distribution function histogramming
    • B. G. Levine, J. E. Stone, and A. Kohlmeyer. Fast analysis of molecular dynamics trajectories with graphics processing units-radial distribution function histogramming. J. Comp. Phys, 230:3556-3569, 2011.
    • (2011) J. Comp. Phys , vol.230 , pp. 3556-3569
    • Levine, B.G.1    Stone, J.E.2    Kohlmeyer, A.3
  • 17
    • 84872288144 scopus 로고    scopus 로고
    • Lattice microbes: High-performance stochastic simulation method for the reaction-diffusion master equation
    • E. Roberts, J. E. Stone, and Z. Luthey-Schulten. Lattice microbes: High-performance stochastic simulation method for the reaction-diffusion master equation. J. Comp. Chem, 34:245-255, 2013.
    • (2013) J. Comp. Chem , vol.34 , pp. 245-255
    • Roberts, E.1    Stone, J.E.2    Luthey-Schulten, Z.3
  • 21
    • 78650777505 scopus 로고    scopus 로고
    • Immersive molecular visualization and interactive modeling with commodity hardware
    • J. E. Stone, A. Kohlmeyer, K. L. Vandivort, and K. Schulten. Immersive molecular visualization and interactive modeling with commodity hardware. Lect. Notes in Comp. Sci, 6454:382-393, 2010.
    • (2010) Lect. Notes in Comp. Sci , vol.6454 , pp. 382-393
    • Stone, J.E.1    Kohlmeyer, A.2    Vandivort, K.L.3    Schulten, K.4
  • 23
    • 84857532423 scopus 로고    scopus 로고
    • How quantum coherence assists photosynthetic light harvesting
    • J. Strumpfer, M. Sener, and K. Schulten. How quantum coherence assists photosynthetic light harvesting. J. Phys. Chem. Lett, 3:536-542, 2012.
    • (2012) J. Phys. Chem. Lett , vol.3 , pp. 536-542
    • Strumpfer, J.1    Sener, M.2    Schulten, K.3
  • 24
    • 0029968922 scopus 로고
    • The contour-buildup algorithm to calculate the analytical molecular surface
    • M. Totrov and R. Abagyan. The contour-buildup algorithm to calculate the analytical molecular surface. Journal of Structural Biolog, 116:138-143, 1995.
    • (1995) Journal of Structural Biolog , vol.116 , pp. 138-143
    • Totrov, M.1    Abagyan, R.2
  • 25
    • 42949089487 scopus 로고    scopus 로고
    • Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics
    • L. G. Trabuco, E. Villa, K. Mitra, J. Frank, and K. Schulten. Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics. Structur, 16:673-683, 2008.
    • (2008) Structur , vol.16 , pp. 673-683
    • Trabuco, L.G.1    Villa, E.2    Mitra, K.3    Frank, J.4    Schulten, K.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.