-
1
-
-
38449106033
-
Reconstitution of yeast translation initiation
-
Acker MG, Kolitz SE, Mitchell SF, Nanda JS, Lorsch JR. 2007. Reconstitution of yeast translation initiation. Methods Enzymol 430:111-145.
-
(2007)
Methods Enzymol
, vol.430
, pp. 111-145
-
-
Acker, M.G.1
Kolitz, S.E.2
Mitchell, S.F.3
Nanda, J.S.4
Lorsch, J.R.5
-
2
-
-
0036224032
-
Development and characterization of a reconstituted yeast translation initiation system
-
Algire MA, Maag D, Savio P, Acker MG, Tarun SZ Jr, Sachs AB, Asano K, Nielsen KH, Olsen DS, Phan L, et al. 2002. Development and characterization of a reconstituted yeast translation initiation system. RNA 8:382-397.
-
(2002)
RNA
, vol.8
, pp. 382-397
-
-
Algire, M.A.1
Maag, D.2
Savio, P.3
Acker, M.G.4
Tarun Jr., S.Z.5
Sachs, A.B.6
Asano, K.7
Nielsen, K.H.8
Olsen, D.S.9
Phan, L.10
-
3
-
-
0034307347
-
A multifactor complex of eukaryotic initiation factors eIF1, eIF2, eIF3, eIF5, and initiator tRNAMet is an important translation initiation intermediate in vivo
-
Asano K, Clayton J, Shalev A, Hinnebusch AG. 2000. A multifactor complex of eukaryotic initiation factors eIF1, eIF2, eIF3, eIF5, and initiator tRNAMet is an important translation initiation intermediate in vivo. Genes Dev 14:2534-2546.
-
(2000)
Genes Dev
, vol.14
, pp. 2534-2546
-
-
Asano, K.1
Clayton, J.2
Shalev, A.3
Hinnebusch, A.G.4
-
4
-
-
0021668558
-
A positive selection for mutants lacking orotidine-5'-phosphate decarboxylase activity in yeast: 5-fluoro-orotic acid resistance
-
Boeke JD, La Croute F, Fink GR. 1984. A positive selection for mutants lacking orotidine-5'-phosphate decarboxylase activity in yeast: 5-fluoro-orotic acid resistance. Mol Gen Genet 197:345-346.
-
(1984)
Mol Gen Genet
, vol.197
, pp. 345-346
-
-
Boeke, J.D.1
La Croute, F.2
Fink, G.R.3
-
5
-
-
34249069609
-
Dissociation of eIF1 from the 40S ribosomal subunit is a key step in start codon selection in vivo
-
Cheung YN, Maag D, Mitchell SF, Fekete CA, Algire MA, Takacs JE, Shirokikh N, Pestova T, Lorsch JR, Hinnebusch AG. 2007. Dissociation of eIF1 from the 40S ribosomal subunit is a key step in start codon selection in vivo. Genes Dev 21:1217-1230.
-
(2007)
Genes Dev
, vol.21
, pp. 1217-1230
-
-
Cheung, Y.N.1
Maag, D.2
Mitchell, S.F.3
Fekete, C.A.4
Algire, M.A.5
Takacs, J.E.6
Shirokikh, N.7
Pestova, T.8
Lorsch, J.R.9
Hinnebusch, A.G.10
-
6
-
-
0024043324
-
Genetic selection for mutations that reduce or abolish ribosomal recognition of the HIS4 translational initiator region
-
Donahue TF, Cigan AM. 1988. Genetic selection for mutations that reduce or abolish ribosomal recognition of the HIS4 translational initiator region. Mol Cell Biol 8:2955-2963.
-
(1988)
Mol Cell Biol
, vol.8
, pp. 2955-2963
-
-
Donahue, T.F.1
Cigan, A.M.2
-
7
-
-
0024266139
-
New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking 6-bp restriction sites
-
Gietz RD, Sugino A. 1988. New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking 6-bp restriction sites. Gene 74:527-534.
-
(1988)
Gene
, vol.74
, pp. 527-534
-
-
Gietz, R.D.1
Sugino, A.2
-
8
-
-
0032873415
-
Three new dominant drug resistance cassettes for gene disruption in Saccharomyces cerevisiae
-
Goldstein AL, McCusker JH. 1999. Three new dominant drug resistance cassettes for gene disruption in Saccharomyces cerevisiae. Yeast 15:1541-1553.
-
(1999)
Yeast
, vol.15
, pp. 1541-1553
-
-
Goldstein, A.L.1
McCusker, J.H.2
-
9
-
-
0036790688
-
Characterization of the minimal catalytic domain within eIF2B: The guanine-nucleotide exchange factor for translation initiation
-
Gomez E, Mohammad SS, Pavitt GD. 2002. Characterization of the minimal catalytic domain within eIF2B: The guanine-nucleotide exchange factor for translation initiation. EMBO J 21:5292-5301.
-
(2002)
EMBO J
, vol.21
, pp. 5292-5301
-
-
Gomez, E.1
Mohammad, S.S.2
Pavitt, G.D.3
-
10
-
-
0025994140
-
Guide to yeast genetics and molecular biology
-
Guthrie C, Fink G. 1991. Guide to yeast genetics and molecular biology. Methods Enzymol 194:1-863.
-
(1991)
Methods Enzymol
, vol.194
, pp. 1-863
-
-
Guthrie, C.1
Fink, G.2
-
11
-
-
0021846299
-
A hierarchy of trans-acting factors modulate translation of an activator of amino acid biosynthetic genes in Saccharomyces cerevisiae
-
Hinnebusch AG. 1985. A hierarchy of trans-acting factors modulate translation of an activator of amino acid biosynthetic genes in Saccharomyces cerevisiae. Mol Cell Biol 5:2349-2360.
-
(1985)
Mol Cell Biol
, vol.5
, pp. 2349-2360
-
-
Hinnebusch, A.G.1
-
12
-
-
27144510561
-
Translational regulation of GCN4 and the general amino acid control of yeast
-
Hinnebusch AG. 2005. Translational regulation of GCN4 and the general amino acid control of yeast. Annu Rev Microbiol 59:407-450.
-
(2005)
Annu Rev Microbiol
, vol.59
, pp. 407-450
-
-
Hinnebusch, A.G.1
-
13
-
-
80052742721
-
Molecular mechanism of scanning and start codon selection in eukaryotes
-
Hinnebusch AG. 2011. Molecular mechanism of scanning and start codon selection in eukaryotes. Microbiol Mol Biol Rev 75:434-467.
-
(2011)
Microbiol Mol Biol Rev
, vol.75
, pp. 434-467
-
-
Hinnebusch, A.G.1
-
14
-
-
84863889691
-
The mechanism of eukaryotic translation initiation: New insights and challenges
-
Hinnebusch AG, Lorsch JR. 2012. The mechanism of eukaryotic translation initiation: New insights and challenges. Cold Spring Harbor Perspect Biol 4:a011544.
-
(2012)
Cold Spring Harbor Perspect Biol
, vol.4
-
-
Hinnebusch, A.G.1
Lorsch, J.R.2
-
15
-
-
0030886675
-
GTP hydrolysis controls stringent selection of the AUG start codon during translation initiation in Saccharomyces cerevisiae
-
Huang H, Yoon H, Hannig EM, Donahue TF. 1997. GTP hydrolysis controls stringent selection of the AUG start codon during translation initiation in Saccharomyces cerevisiae. Genes Dev 11:2396-2413.
-
(1997)
Genes Dev
, vol.11
, pp. 2396-2413
-
-
Huang, H.1
Yoon, H.2
Hannig, E.M.3
Donahue, T.F.4
-
16
-
-
58149104495
-
Kinetic and thermodynamic analysis of the role of start codon/anticodon base pairing during eukaryotic translation initiation
-
Kolitz SE, Takacs JE, Lorsch JR. 2009. Kinetic and thermodynamic analysis of the role of start codon/anticodon base pairing during eukaryotic translation initiation. RNA 15:138-152.
-
(2009)
RNA
, vol.15
, pp. 138-152
-
-
Kolitz, S.E.1
Takacs, J.E.2
Lorsch, J.R.3
-
17
-
-
84881666192
-
The initiation of mammalian protein synthesis and mRNA scanning mechanism
-
Lomakin IB, Steitz TA. 2013. The initiation of mammalian protein synthesis and mRNA scanning mechanism. Nature 500:307-311.
-
(2013)
Nature
, vol.500
, pp. 307-311
-
-
Lomakin, I.B.1
Steitz, T.A.2
-
18
-
-
0031820288
-
Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae
-
Longtine MS, McKenzie A III, Demarini DJ, Shah NG, Wach A, Brachat A, Philippsen P, Pringle JR. 1998. Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae. Yeast 14:953-961.
-
(1998)
Yeast
, vol.14
, pp. 953-961
-
-
Longtine, M.S.1
McKenzie III, A.2
Demarini, D.J.3
Shah, N.G.4
Wach, A.5
Brachat, A.6
Philippsen, P.7
Pringle, J.R.8
-
19
-
-
84863098988
-
The C-terminal domain of eukaryotic initiation factor 5 promotes start codon recognition by its dynamic interplay with eIF1 and eIF2β
-
Luna RE, Arthanari H, Hiraishi H, Nanda J, Martin-Marcos P, Markus MA, Akabayov B, Milbradt AG, Luna LE, Seo HC, et al. 2012. The C-terminal domain of eukaryotic initiation factor 5 promotes start codon recognition by its dynamic interplay with eIF1 and eIF2β. Cell Rep 1:689-702.
-
(2012)
Cell Rep
, vol.1
, pp. 689-702
-
-
Luna, R.E.1
Arthanari, H.2
Hiraishi, H.3
Nanda, J.4
Martin-Marcos, P.5
Markus, M.A.6
Akabayov, B.7
Milbradt, A.G.8
Luna, L.E.9
Seo, H.C.10
-
20
-
-
0037675905
-
Communication between eukaryotic translation initiation factors 1 and 1A on the yeast small ribosomal subunit
-
Maag D, Lorsch JR. 2003. Communication between eukaryotic translation initiation factors 1 and 1A on the yeast small ribosomal subunit. J Mol Biol 330:917-924.
-
(2003)
J Mol Biol
, vol.330
, pp. 917-924
-
-
Maag, D.1
Lorsch, J.R.2
-
21
-
-
12344314307
-
A conformational change in the eukaryotic translation preinitiation complex and release of eIF1 signal recognition of the start codon
-
Maag D, Fekete CA, Gryczynski Z, Lorsch JR. 2005. A conformational change in the eukaryotic translation preinitiation complex and release of eIF1 signal recognition of the start codon. Mol Cell 17:265-275.
-
(2005)
Mol Cell
, vol.17
, pp. 265-275
-
-
Maag, D.1
Fekete, C.A.2
Gryczynski, Z.3
Lorsch, J.R.4
-
22
-
-
31344481752
-
Communication between eukaryotic translation initiation factors 5 and 1A within the ribosomal preinitiation complex plays a role in start site selection
-
Maag D, Algire MA, Lorsch JR. 2006. Communication between eukaryotic translation initiation factors 5 and 1A within the ribosomal preinitiation complex plays a role in start site selection. J Mol Biol 356:724-737.
-
(2006)
J Mol Biol
, vol.356
, pp. 724-737
-
-
Maag, D.1
Algire, M.A.2
Lorsch, J.R.3
-
23
-
-
38449103508
-
NMR methods for studying protein-protein interactions involved in translation initiation
-
Marintchev A, Frueh D, Wagner G. 2007. NMR methods for studying protein-protein interactions involved in translation initiation. Methods Enzymol 430:283-331.
-
(2007)
Methods Enzymol
, vol.430
, pp. 283-331
-
-
Marintchev, A.1
Frueh, D.2
Wagner, G.3
-
24
-
-
83255187893
-
Functional elements in initiation factors 1, 1A and 2β discriminate against poor AUG context and non-AUG start codons
-
Martin-Marcos P, Cheung YN, Hinnebusch AG. 2011. Functional elements in initiation factors 1, 1A and 2β discriminate against poor AUG context and non-AUG start codons. Mol Cell Biol 31:4814-4831.
-
(2011)
Mol Cell Biol
, vol.31
, pp. 4814-4831
-
-
Martin-Marcos, P.1
Cheung, Y.N.2
Hinnebusch, A.G.3
-
25
-
-
84884541284
-
β-Hairpin loop of eIF1 mediates 40 S ribosome binding to regulate initiator tRNAMet recruitment and accuracy of AUG selection in vivo
-
Martin-Marcos P, Nanda J, Luna RE, Wagner G, Lorsch JR, Hinnebusch AG. 2013. β-Hairpin loop of eIF1 mediates 40 S ribosome binding to regulate initiator tRNAMet recruitment and accuracy of AUG selection in vivo. J Biol Chem 288:27546-27562.
-
(2013)
J Biol Chem
, vol.288
, pp. 27546-27562
-
-
Martin-Marcos, P.1
Nanda, J.2
Luna, R.E.3
Wagner, G.4
Lorsch, J.R.5
Hinnebusch, A.G.6
-
26
-
-
0026320245
-
Association of RAP1 binding sites with stringent control of ribosomal protein gene transcription in Saccharomyces cerevisiae
-
Moehle CM, Hinnebusch AG. 1991. Association of RAP1 binding sites with stringent control of ribosomal protein gene transcription in Saccharomyces cerevisiae. Mol Cell Biol 11:2723-2735.
-
(1991)
Mol Cell Biol
, vol.11
, pp. 2723-2735
-
-
Moehle, C.M.1
Hinnebusch, A.G.2
-
27
-
-
70350557033
-
EIF1 controls multiple steps in start codon recognition during eukaryotic translation initiation
-
Nanda JS, Cheung YN, Takacs JE, Martin-Marcos P, Saini AK, Hinnebusch AG, Lorsch JR. 2009. eIF1 controls multiple steps in start codon recognition during eukaryotic translation initiation. J Mol Biol 394:268-285.
-
(2009)
J Mol Biol
, vol.394
, pp. 268-285
-
-
Nanda, J.S.1
Cheung, Y.N.2
Takacs, J.E.3
Martin-Marcos, P.4
Saini, A.K.5
Hinnebusch, A.G.6
Lorsch, J.R.7
-
28
-
-
84874310624
-
Coordinated movements of eukaryotic translation initiation factors eIF1, eIF1A, and eIF5 trigger phosphate release from eIF2 in response to start codon recognition by the ribosomal preinitiation complex
-
Nanda JS, Saini AK, Munoz AM, Hinnebusch AG, Lorsch JR. 2013. Coordinated movements of eukaryotic translation initiation factors eIF1, eIF1A, and eIF5 trigger phosphate release from eIF2 in response to start codon recognition by the ribosomal preinitiation complex. J Biol Chem 288:5316-5329.
-
(2013)
J Biol Chem
, vol.288
, pp. 5316-5329
-
-
Nanda, J.S.1
Saini, A.K.2
Munoz, A.M.3
Hinnebusch, A.G.4
Lorsch, J.R.5
-
29
-
-
0034973590
-
Transcriptional profiling shows that Gcn4p is a master regulator of gene expression during amino acid starvation in yeast
-
Natarajan K, Meyer MR, Jackson BM, Slade D, Roberts C, Hinnebusch AG, Marton MJ. 2001. Transcriptional profiling shows that Gcn4p is a master regulator of gene expression during amino acid starvation in yeast. Mol Cell Biol 21:4347-4368.
-
(2001)
Mol Cell Biol
, vol.21
, pp. 4347-4368
-
-
Natarajan, K.1
Meyer, M.R.2
Jackson, B.M.3
Slade, D.4
Roberts, C.5
Hinnebusch, A.G.6
Marton, M.J.7
-
30
-
-
34047263278
-
The eukaryotic translation initiation factors eIF1 and eIF1A induce an open conformation of the 40S ribosome
-
Passmore LA, Schmeing TM, Maag D, Applefield DJ, Acker MG, Algire MA, Lorsch JR, Ramakrishnan V. 2007. The eukaryotic translation initiation factors eIF1 and eIF1A induce an open conformation of the 40S ribosome. Mol Cell 26:41-50.
-
(2007)
Mol Cell
, vol.26
, pp. 41-50
-
-
Passmore, L.A.1
Schmeing, T.M.2
Maag, D.3
Applefield, D.J.4
Acker, M.G.5
Algire, M.A.6
Lorsch, J.R.7
Ramakrishnan, V.8
-
31
-
-
0032519585
-
EIF2 independently binds two distinct eIF2B subcomplexes that catalyze and regulate guanine-nucleotide exchange
-
Pavitt GD, Ramaiah K V A, Kimball SR, Hinnebusch AG. 1998. eIF2 independently binds two distinct eIF2B subcomplexes that catalyze and regulate guanine-nucleotide exchange. Genes Dev 12:514-526.
-
(1998)
Genes Dev
, vol.12
, pp. 514-526
-
-
Pavitt, G.D.1
Ramaiah, K.V.A.2
Kimball, S.R.3
Hinnebusch, A.G.4
-
32
-
-
79951510534
-
Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1
-
Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N. 2011. Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science 331:730-736.
-
(2011)
Science
, vol.331
, pp. 730-736
-
-
Rabl, J.1
Leibundgut, M.2
Ataide, S.F.3
Haag, A.4
Ban, N.5
-
33
-
-
38149140938
-
Eukaryotic initiation factor (eIF) 1 carries two distinct eIF5-binding faces important for multifactor assembly and AUG selection
-
Reibarkh M, Yamamoto Y, Singh CR, Del Rio F, Fahmy A, Lee B, Luna RE, Ii M, Wagner G, Asano K. 2008. Eukaryotic initiation factor (eIF) 1 carries two distinct eIF5-binding faces important for multifactor assembly and AUG selection. J Biol Chem 283:1094-1103.
-
(2008)
J Biol Chem
, vol.283
, pp. 1094-1103
-
-
Reibarkh, M.1
Yamamoto, Y.2
Singh, C.R.3
Del Rio, F.4
Fahmy, A.5
Lee, B.6
Luna, R.E.7
Ii, M.8
Wagner, G.9
Asano, K.10
-
34
-
-
0020479804
-
Import of proteins into mitochondria. Yeast cells grown in the presence of carbonyl cyanide m-chlorophenylhydrazone accumulate massive amounts of some mitochondrial precursor polypeptides
-
Reid GA, Schatz G. 1982. Import of proteins into mitochondria. Yeast cells grown in the presence of carbonyl cyanide m-chlorophenylhydrazone accumulate massive amounts of some mitochondrial precursor polypeptides. J Biol Chem 257:13056-13061.
-
(1982)
J Biol Chem
, vol.257
, pp. 13056-13061
-
-
Reid, G.A.1
Schatz, G.2
-
35
-
-
73549103606
-
Regulatory elements in eIF1A control the fidelity of start codon selection by modulating tRNAiMet binding to the ribosome
-
Saini AK, Nanda JS, Lorsch JR, Hinnebusch AG. 2010. Regulatory elements in eIF1A control the fidelity of start codon selection by modulating tRNAiMet binding to the ribosome. Genes Dev 24:97-110.
-
(2010)
Genes Dev
, vol.24
, pp. 97-110
-
-
Saini, A.K.1
Nanda, J.S.2
Lorsch, J.R.3
Hinnebusch, A.G.4
-
36
-
-
3843096103
-
Efficient incorporation of eukaryotic initiation factor 1 into the multifactor complex is critical for formation of functional ribosomal preinitiation complexes in vivo
-
Singh CR, He H, Ii M, Yamamoto Y, Asano K. 2004. Efficient incorporation of eukaryotic initiation factor 1 into the multifactor complex is critical for formation of functional ribosomal preinitiation complexes in vivo. J Biol Chem 279:31910-31920.
-
(2004)
J Biol Chem
, vol.279
, pp. 31910-31920
-
-
Singh, C.R.1
He, H.2
Ii, M.3
Yamamoto, Y.4
Asano, K.5
-
37
-
-
6344291066
-
Interactions of eukaryotic translation initiation factor 3 (eIF3) subunit NIP1/c with eIF1 and eIF5 promote preinitiation complex assembly and regulate start codon selection
-
Valasek L, Nielsen KH, Zhang F, Fekete CA, Hinnebusch AG. 2004. Interactions of eukaryotic translation initiation factor 3 (eIF3) subunit NIP1/c with eIF1 and eIF5 promote preinitiation complex assembly and regulate start codon selection. Mol Cell Biol 24:9437-9455.
-
(2004)
Mol Cell Biol
, vol.24
, pp. 9437-9455
-
-
Valasek, L.1
Nielsen, K.H.2
Zhang, F.3
Fekete, C.A.4
Hinnebusch, A.G.5
-
38
-
-
0026609868
-
The sui1 suppressor locus in Saccharomyces cerevisiae encodes a translation factor that functions during tRNAiMet recognition of the start codon
-
Yoon HJ, Donahue TF. 1992. The sui1 suppressor locus in Saccharomyces cerevisiae encodes a translation factor that functions during tRNAiMet recognition of the start codon. Mol Cell Biol 12:248-260.
-
(1992)
Mol Cell Biol
, vol.12
, pp. 248-260
-
-
Yoon, H.J.1
Donahue, T.F.2
-
39
-
-
69849092725
-
Position of eukaryotic translation initiation factor eIF1A on the 40S ribosomal subunit mapped by directed hydroxyl radical probing
-
Yu Y, Marintchev A, Kolupaeva VG, Unbehaun A, Veryasova T, Lai SC, Hong P, Wagner G, Hellen CU, Pestova TV. 2009. Position of eukaryotic translation initiation factor eIF1A on the 40S ribosomal subunit mapped by directed hydroxyl radical probing. Nucleic Acids Res 37:5167-5182.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 5167-5182
-
-
Yu, Y.1
Marintchev, A.2
Kolupaeva, V.G.3
Unbehaun, A.4
Veryasova, T.5
Lai, S.C.6
Hong, P.7
Wagner, G.8
Hellen, C.U.9
Pestova, T.V.10
|