-
1
-
-
52049092682
-
Worlds within worlds: evolution of the vertebrate gut microbiota
-
Ley RE, Lozupone CA, Hamady M, Knight R, Gordon JI. 2008. Worlds within worlds: evolution of the vertebrate gut microbiota. Nat. Rev. Microbiol. 6:776-788. http://dx.doi.org/10.1038/nrmicro1978.
-
(2008)
Nat. Rev. Microbiol.
, vol.6
, pp. 776-788
-
-
Ley, R.E.1
Lozupone, C.A.2
Hamady, M.3
Knight, R.4
Gordon, J.I.5
-
2
-
-
84863871551
-
Microbial degradation of complex carbohydrates in the gut
-
Flint HJ, Scott KP, Duncan SH, Louis P, Forano E. 2012. Microbial degradation of complex carbohydrates in the gut. Gut Microbes 3:289- 306. http://dx.doi.org/10.4161/gmic.19897.
-
(2012)
Gut Microbes
, vol.3
-
-
Flint, H.J.1
Scott, K.P.2
Duncan, S.H.3
Louis, P.4
Forano, E.5
-
3
-
-
42449083102
-
The chemistry of complex carbohydrates
-
Cho SS, Prosky L, Dreher M (ed), Complex carbohydrates in foods. Marcel Dekker, New York, NY.
-
Lineback DR. 1999. The chemistry of complex carbohydrates, p 115-129. In Cho SS, Prosky L, Dreher M (ed), Complex carbohydrates in foods. Marcel Dekker, New York, NY.
-
(1999)
, pp. 115-129
-
-
Lineback, D.R.1
-
4
-
-
0025321505
-
Entergy contributions of volatile fatty acids from the gastrointestinal tract in various species
-
Bergman EN. 1990. Entergy contributions of volatile fatty acids from the gastrointestinal tract in various species. Physiol. Rev. 70:567-590.
-
(1990)
Physiol. Rev.
, vol.70
, pp. 567-590
-
-
Bergman, E.N.1
-
5
-
-
84892450452
-
-
Nutritional ecology of the ruminant. 2nd ed. Comstock Publishing Associates, Ithaca, NY.
-
Van Soest PJ. 1994. Nutritional ecology of the ruminant. 2nd ed. Comstock Publishing Associates, Ithaca, NY.
-
(1994)
-
-
Van Soest, P.J.1
-
6
-
-
28644438257
-
Novel hydrolase diversity retrieved from a metagemone library of bovine rumen microflora
-
Ferrer M, Golyshina OV, Chernikova TN, Khachane AN, Reyes-Duarte D, Martins Dos Santos VAP, Strompl C, Elborough K, Jarvis G, Neef A, Yakimov MM, Timmis KN, Golyshin PN. 2005. Novel hydrolase diversity retrieved from a metagemone library of bovine rumen microflora. Environ. Microbiol. 7:1996-2010. http://dx.doi.org/10.1111/j.1462-2920.2005.00920.x.
-
(2005)
Environ. Microbiol.
, vol.7
, pp. 1996-2010
-
-
Ferrer, M.1
Golyshina, O.V.2
Chernikova, T.N.3
Khachane, A.N.4
Reyes-Duarte, D.5
Martins Dos Santos, V.A.P.6
Strompl, C.7
Elborough, K.8
Jarvis, G.9
Neef, A.10
Yakimov, M.M.11
Timmis, K.N.12
Golyshin, P.N.13
-
7
-
-
60549114321
-
Gene-centric metagemomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases
-
Brulc JM, Antonopoulos DA, Miller ME, Wilson MK, Yannarell AC, Dinsdale EA, Edwards RE, Frank ED, Emerson JB, Wacklin P, Coutinho PM, Henrissat B, Nelson KE, White BA. 2009. Gene-centric metagemomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases. Proc. Natl. Acad. Sci. U. S. A. 106: 1948-1953. http://dx.doi.org/10.1073/pnas.0806191105.
-
(2009)
Proc. Natl. Acad. Sci. U. S. A.
, vol.106
, pp. 1948-1953
-
-
Brulc, J.M.1
Antonopoulos, D.A.2
Miller, M.E.3
Wilson, M.K.4
Yannarell, A.C.5
Dinsdale, E.A.6
Edwards, R.E.7
Frank, E.D.8
Emerson, J.B.9
Wacklin, P.10
Coutinho, P.M.11
Henrissat, B.12
Nelson, K.E.13
White, B.A.14
-
8
-
-
33744804299
-
Metagenomic analysis of the human distal gut microbiome
-
Gill SR, Pop M, DeBoy RT, Eckburg PB, Turnbaugh PJ, Samuel BS, Gordon JI, Relman DA, Fraser-Ligget CM, Nelson KE. 2006. Metagenomic analysis of the human distal gut microbiome. Science 312:1355- 1359. http://dx.doi.org/10.1126/science.1124234.
-
(2006)
Science
, vol.312
-
-
Gill, S.R.1
Pop, M.2
DeBoy, R.T.3
Eckburg, P.B.4
Turnbaugh, P.J.5
Samuel, B.S.6
Gordon, J.I.7
Relman, D.A.8
Fraser-Ligget, C.M.9
Nelson, K.E.10
-
9
-
-
38449088143
-
Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes
-
Kurokawa K, Itoh T, Kuwahara T, Oshima K, Toh H, Toyoda A, Takami H, Morita H, Sharma VK, Srivastava TP, Taylor TD, Noguchi H, Mori H, Ogura Y, Ehrlich DS, Itoh K, Takagi T, Sakaki Y, Hayashi T, Hattori M. 2007. Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes. DNA Res. 14:169-181. http://dx.doi.org/10.1093/dnares/dsm018.
-
(2007)
DNA Res.
, vol.14
, pp. 169-181
-
-
Kurokawa, K.1
Itoh, T.2
Kuwahara, T.3
Oshima, K.4
Toh, H.5
Toyoda, A.6
Takami, H.7
Morita, H.8
Sharma, V.K.9
Srivastava, T.P.10
Taylor, T.D.11
Noguchi, H.12
Mori, H.13
Ogura, Y.14
Ehrlich, D.S.15
Itoh, K.16
Takagi, T.17
Sakaki, Y.18
Hayashi, T.19
Hattori, M.20
more..
-
10
-
-
79955794476
-
Comparative fecal metagenomics unveils unique functional capacity of the swine gut.
-
Lamendella R, Santo Domingo SW, Ghosh S, Martinson J, Oerther DB. 2011 Comparative fecal metagenomics unveils unique functional capacity of the swine gut. BMC Microbiol. 11:103. http://dx.doi.org/10.1186/1471-2180-11-103.
-
(2011)
BMC Microbiol.
, vol.11
, Issue.103
-
-
Lamendella, R.1
Santo Domingo, S.W.2
Ghosh, S.3
Martinson, J.4
Oerther, D.B.5
-
11
-
-
51449108782
-
Comparative metagenomics reveals host specific metavirulomes and horizontal gene transfer elements in the chicken cecum microbiome
-
Qu A, Brulc JM, Wilson MK, Law BF, Theoret JR, Joens LA, Konkel ME, Angly F, Dinsdale EE, Edwards RA, Nelson KE, White BA. 2008. Comparative metagenomics reveals host specific metavirulomes and horizontal gene transfer elements in the chicken cecum microbiome. PLoS One 3:e2945. http://dx.doi.org/10.1371/journal.pone.0002945.
-
(2008)
PLoS One
, vol.3
-
-
Qu, A.1
Brulc, J.M.2
Wilson, M.K.3
Law, B.F.4
Theoret, J.R.5
Joens, L.A.6
Konkel, M.E.7
Angly, F.8
Dinsdale, E.E.9
Edwards, R.A.10
Nelson, K.E.11
White, B.A.12
-
12
-
-
77952225556
-
Comparative studies of microbial populations in the rumen, duodenum, ileum and faeces of lactating dairy cows
-
Frey JC, Pell AN, Berthiume R, Lapierre H, Lee S, Ha JK, Mendell JE, Angert ER. 2010. Comparative studies of microbial populations in the rumen, duodenum, ileum and faeces of lactating dairy cows. J. Appl. Microbiol. 108:1982-1993. http://dx.doi.org/10.1111/j.1365-2672.2009.04602.x.
-
(2010)
J. Appl. Microbiol.
, vol.108
, pp. 1982-1993
-
-
Frey, J.C.1
Pell, A.N.2
Berthiume, R.3
Lapierre, H.4
Lee, S.5
Ha, J.K.6
Mendell, J.E.7
Angert, E.R.8
-
13
-
-
70349938064
-
Spatial and temporal variations of the bacterial community in the bovine digestive tract
-
Michelland RJ, Monteils V, Zened A, Combes S, Cauquil L, Gidenne T, Hamelin J, Fortun-Lamothe L. 2009. Spatial and temporal variations of the bacterial community in the bovine digestive tract. J. Appl. Microbiol. 107:1642-1650. http://dx.doi.org/10.1111/j.1365-2672.2009.04346.x.
-
(2009)
J. Appl. Microbiol.
, vol.107
, pp. 1642-1650
-
-
Michelland, R.J.1
Monteils, V.2
Zened, A.3
Combes, S.4
Cauquil, L.5
Gidenne, T.6
Hamelin, J.7
Fortun-Lamothe, L.8
-
14
-
-
84857114196
-
Comparative analyses of foregut and hindgut bacterial communities in hoatzins and cows
-
Godoy-Vitorino F, Goldfarb KC, Karaoz U, Leal S, Garcia-Amado MA, Hugenholtz P, Tringe SG, Brodie EL, Dominguez-Bello MG. 2012. Comparative analyses of foregut and hindgut bacterial communities in hoatzins and cows. ISME J. 6:531-541. http://dx.doi.org/10.1038/ismej.2011.131.
-
(2012)
ISME J.
, vol.6
, pp. 531-541
-
-
Godoy-Vitorino, F.1
Goldfarb, K.C.2
Karaoz, U.3
Leal, S.4
Garcia-Amado, M.A.5
Hugenholtz, P.6
Tringe, S.G.7
Brodie, E.L.8
Dominguez-Bello, M.G.9
-
15
-
-
79955620831
-
Community structures of fecal bacteria in cattle from different animal feeding operations
-
Shanks OC, Kelty CA, Archibeque S, Jenkins M, Newton RJ, McLellan SL, Huse SM, Sogin ML. 2011. Community structures of fecal bacteria in cattle from different animal feeding operations. Appl. Environ. Microbiol. 77:2992-3001. http://dx.doi.org/10.1128/AEM.02988-10.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 2992-3001
-
-
Shanks, O.C.1
Kelty, C.A.2
Archibeque, S.3
Jenkins, M.4
Newton, R.J.5
McLellan, S.L.6
Huse, S.M.7
Sogin, M.L.8
-
16
-
-
84870417255
-
The diversity of the fecal bacterial community and its relationship with the concentration of volatile fatty acids in the feces during subacute rumen acidosis in dairy cows
-
Mao S, Zhang R, Wang D, Zhu W. 2012. The diversity of the fecal bacterial community and its relationship with the concentration of volatile fatty acids in the feces during subacute rumen acidosis in dairy cows. BMC Vet. Res. 8:237. http://dx.doi.org/10.1186/1746-6148-8-237.
-
(2012)
BMC Vet. Res.
, vol.8
, pp. 237
-
-
Mao, S.1
Zhang, R.2
Wang, D.3
Zhu, W.4
-
17
-
-
79251641527
-
Virulence-associated and antibiotic resistance genes of microbial populations in cattle feces analyzed using a metagenomic approach
-
Durso LM, Harhay GP, Bono JL, Smith TPL. 2011. Virulence-associated and antibiotic resistance genes of microbial populations in cattle feces analyzed using a metagenomic approach. J. Microbiol. Methods 84:278- 282. http://dx.doi.org/10.1016/j.mimet.2010.12.008.
-
(2011)
J. Microbiol. Methods
, vol.84
-
-
Durso, L.M.1
Harhay, G.P.2
Bono, J.L.3
Smith, T.P.L.4
-
18
-
-
0018957077
-
Differential carbohydrate media and anaerobic replica plating techniques in delineating carbohydrate-utilizing subgroups in rumen bacterial populations
-
Leedle JAZ, Hespell RB. 1980. Differential carbohydrate media and anaerobic replica plating techniques in delineating carbohydrate-utilizing subgroups in rumen bacterial populations. Appl. Environ. Microbiol. 39: 709-719.
-
(1980)
Appl. Environ. Microbiol.
, vol.39
, pp. 709-719
-
-
Leedle, J.A.Z.1
Hespell, R.B.2
-
19
-
-
84873790809
-
Replicate plating and indirect selection of bacterial mutants
-
Lederberg J, Lederberg EM. 1952. Replicate plating and indirect selection of bacterial mutants. J. Bacteriol. 63:399-406.
-
(1952)
J. Bacteriol.
, vol.63
, pp. 399-406
-
-
Lederberg, J.1
Lederberg, E.M.2
-
20
-
-
0001857117
-
16S/23S rRNA sequencing
-
In Stackebrandt E, GoodfellowM(ed), Nucleic acid techniques in bacterial systematics. John Wiley & Sons, Inc, New York, NY.
-
Lane DJ. 1991. 16S/23S rRNA sequencing, p 115-163. In Stackebrandt E, GoodfellowM(ed), Nucleic acid techniques in bacterial systematics. John Wiley & Sons, Inc, New York, NY.
-
(1991)
, pp. 115-163
-
-
Lane, D.J.1
-
21
-
-
13444304367
-
The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis
-
Cole JR, Chai B, Farris RJ, Wang Q, Kulam SA, McGarrel DM, Garrity GM, Tiedje JM. 2005. The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis. Nucleic Acids Res. 33:D294-D296. http://dx.doi.org/10.1093/nar/gki038.
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Cole, J.R.1
Chai, B.2
Farris, R.J.3
Wang, Q.4
Kulam, S.A.5
McGarrel, D.M.6
Garrity, G.M.7
Tiedje, J.M.8
-
22
-
-
84858185944
-
Composition and similarity of bovine rumen microbiota across individual animals
-
Jami E, Mizrahi I. 2012. Composition and similarity of bovine rumen microbiota across individual animals. PLoS One 7:e33306. http://dx.doi.org/10.1371/journal.pone.0033306.
-
(2012)
PLoS One
, vol.7
-
-
Jami, E.1
Mizrahi, I.2
-
23
-
-
84863098466
-
High throughput whole rumen metagenome profiling using untargeted massively parallel sequencing
-
Ross EM, Moate PJ, Bath CR, Davidson SE, Sawbridge TI, Guthridge KM, Cocks BF, Hayes BJ. 2012. High throughput whole rumen metagenome profiling using untargeted massively parallel sequencing. BMC Genet. 13:53. http://dx.doi.org/10.1186/1471-2156-13-53.
-
(2012)
BMC Genet.
, vol.13
, pp. 53
-
-
Ross, E.M.1
Moate, P.J.2
Bath, C.R.3
Davidson, S.E.4
Sawbridge, T.I.5
Guthridge, K.M.6
Cocks, B.F.7
Hayes, B.J.8
-
24
-
-
25844500719
-
Culture-independent analysis of fecal microbiota in cattle
-
Ozutsumi Y, Hayashi H, Sakamoto M, Itabashi H, Benno Y. 2005. Culture-independent analysis of fecal microbiota in cattle. Biosci. Biotechnol. Biochem. 69:1793-1797. http://dx.doi.org/10.1271/bbb.69.1793.
-
(2005)
Biosci. Biotechnol. Biochem.
, vol.69
, pp. 1793-1797
-
-
Ozutsumi, Y.1
Hayashi, H.2
Sakamoto, M.3
Itabashi, H.4
Benno, Y.5
-
25
-
-
52149085893
-
The all-species living tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains
-
Yarza P, Richter M, Peplies J, Euzeby J, Amann R, Schleifer K-H, Ludwig W, Glöcner FO, Rosselló-Móra R. 2008. The all-species living tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains. Syst. Appl. Microbiol. 31:241-250. http://dx.doi.org/10.1016/j.syapm.2008.07.001.
-
(2008)
Syst. Appl. Microbiol.
, vol.31
, pp. 241-250
-
-
Yarza, P.1
Richter, M.2
Peplies, J.3
Euzeby, J.4
Amann, R.5
Schleifer, K.-H.6
Ludwig, W.7
Glöcner, F.O.8
Rosselló-Móra, R.9
-
26
-
-
84885927619
-
Defining taxonomic ranks
-
In Rosenberg E, DeLong EF, Stackebrandt E, Lory S, Thompson F (ed), The prokaryotes-prokaryotic biology and symbiotic associations. Springer- Verlag, Berlin, Germany.
-
Konstantinidis KT, Stackebrandt E. 2013. Defining taxonomic ranks. In Rosenberg E, DeLong EF, Stackebrandt E, Lory S, Thompson F (ed), The prokaryotes-prokaryotic biology and symbiotic associations. Springer- Verlag, Berlin, Germany.
-
(2013)
-
-
Konstantinidis, K.T.1
Stackebrandt, E.2
-
27
-
-
80054119008
-
Microbiome analysis of dairy cows fed pasture or total mixed ration diets
-
de Menezes AB, Lewis E, O'Donovan M, O'Neill BF, Clipson N, Doyle EM. 2011. Microbiome analysis of dairy cows fed pasture or total mixed ration diets. FEMS Microbiol. Ecol. 78:256-265. http://dx.doi.org/10.1111/j.1574-6941.2011.01151.x.
-
(2011)
FEMS Microbiol. Ecol.
, vol.78
, pp. 256-265
-
-
de Menezes, A.B.1
Lewis, E.2
O'Donovan, M.3
O'Neill, B.F.4
Clipson, N.5
Doyle, E.M.6
-
28
-
-
0028126829
-
The phylogeny of the genus Clostridium: proposal of five new genera and eleven new species combinations
-
Collins MD, Lawson PA, Willems A, Cordoba JJ, Frenandez-Garayzabal J, Garcia P, Cai J, Hippe H, Farrow JAE. 1994. The phylogeny of the genus Clostridium: proposal of five new genera and eleven new species combinations. Int. J. Syst. Bacteriol. 44:812-826. http://dx.doi.org/10.1099/00207713-44-4-812.
-
(1994)
Int. J. Syst. Bacteriol.
, vol.44
, pp. 812-826
-
-
Collins, M.D.1
Lawson, P.A.2
Willems, A.3
Cordoba, J.J.4
Frenandez-Garayzabal, J.5
Garcia, P.6
Cai, J.7
Hippe, H.8
Farrow, J.A.E.9
-
29
-
-
65549150087
-
Comparative assessment of human and farm animal faecal microbiota using real-time quantitative PCR
-
Furet J-P, Firmesse O, Gourmelon M, Bridonneau C, Tap J, Mondot S, Doré J, Corthier G. 2009. Comparative assessment of human and farm animal faecal microbiota using real-time quantitative PCR. FEMS Microbiol. Ecol. 68:351-352. http://dx.doi.org/10.1111/j.1574-6941.2009.00671.x.
-
(2009)
FEMS Microbiol. Ecol.
, vol.68
, pp. 351-352
-
-
Furet, J.-P.1
Firmesse, O.2
Gourmelon, M.3
Bridonneau, C.4
Tap, J.5
Mondot, S.6
Doré, J.7
Corthier, G.8
-
30
-
-
0034840478
-
The cellulosome and cellulose degradation by anaerobic bacteria
-
Schwarz WH. 2001. The cellulosome and cellulose degradation by anaerobic bacteria. Appl. Microbiol. Biotechnol. 56:634-649. http://dx.doi.org/10.1007/s002530100710.
-
(2001)
Appl. Microbiol. Biotechnol.
, vol.56
, pp. 634-649
-
-
Schwarz, W.H.1
-
31
-
-
70350455262
-
The prospects of cellulose-producing bacteria for the bioconversion of lignocellulosic biomass
-
Maki M, Leung KT, Qin W. 2009. The prospects of cellulose-producing bacteria for the bioconversion of lignocellulosic biomass. Int. J. Biol. Sci. 5:500-516. http://dx.doi.org/10.7150/ijbs.5.500.
-
(2009)
Int. J. Biol. Sci.
, vol.5
, pp. 500-516
-
-
Maki, M.1
Leung, K.T.2
Qin, W.3
-
32
-
-
0024490353
-
Isolation and characterization of an anaerobic, cellulolytic bacterium, Clostridium celerecrescens sp
-
Palop MLL, Valles S, Piñaga F, Flors A. 1989. Isolation and characterization of an anaerobic, cellulolytic bacterium, Clostridium celerecrescens sp. nov. Int. J. Syst. Bacteriol. 39:68-71. http://dx.doi.org/10.1099/00207713-39-1-68.
-
(1989)
nov. Int. J. Syst. Bacteriol.
, vol.39
, pp. 68-71
-
-
Palop, M.L.L.1
Valles, S.2
Piñaga, F.3
Flors, A.4
-
33
-
-
49449109117
-
Exopolysaccharides produced by intestinal Bifidobacterium strains as fermentable substrates for human intestinal bacteria
-
Salazar N, Gueimonde M, Hernández-Barranco AM, Ruas-Madiedo P, de los Reyes-Gavilán CG. 2008. Exopolysaccharides produced by intestinal Bifidobacterium strains as fermentable substrates for human intestinal bacteria. Appl. Environ. Microbiol. 74:4737-4745. http://dx.doi.org/10.1128/AEM.00325-08.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 4737-4745
-
-
Salazar, N.1
Gueimonde, M.2
Hernández-Barranco, A.M.3
Ruas-Madiedo, P.4
de los Reyes-Gavilán, C.G.5
-
34
-
-
0041851187
-
Isolation, characterization and comparison of bacteria from swine faeces and manure storage pits
-
Cotta MA, Whitehead TR, Zeltwanger RL. 2003. Isolation, characterization and comparison of bacteria from swine faeces and manure storage pits. Environ. Microbiol. 5:737-745. http://dx.doi.org/10.1046/j.1467-2920.2003.00467.x.
-
(2003)
Environ. Microbiol.
, vol.5
, pp. 737-745
-
-
Cotta, M.A.1
Whitehead, T.R.2
Zeltwanger, R.L.3
-
35
-
-
0018325870
-
Energy sources of major intestinal fermentative anaerobes
-
Salyers AA. 1979. Energy sources of major intestinal fermentative anaerobes. Am. J. Clin. Nutr. 32:158-163.
-
(1979)
Am. J. Clin. Nutr.
, vol.32
, pp. 158-163
-
-
Salyers, A.A.1
-
36
-
-
79953731940
-
A closer look at Bacteroides: phylogenetic relationship and genomic implications of a life in the human gut
-
Karlsson FH, Ussery DW, Nielsen J, Nookaew I. 2011. A closer look at Bacteroides: phylogenetic relationship and genomic implications of a life in the human gut. Microb. Ecol. 61:473-485. http://dx.doi.org/10.1007/s00248-010-9796-1.
-
(2011)
Microb. Ecol.
, vol.61
, pp. 473-485
-
-
Karlsson, F.H.1
Ussery, D.W.2
Nielsen, J.3
Nookaew, I.4
-
38
-
-
77955557236
-
Characterization of Xyn10A, a highly active xylanase from the human gut bacterium Bacteroides xylanisolvens XB1A.
-
Mirande C, Mosoni P, Béra-Maillet C, Bernalier-Donadille A, Forano E. 2010 Characterization of Xyn10A, a highly active xylanase from the human gut bacterium Bacteroides xylanisolvens XB1A. Appl. Microbiol. Biotechnol. 87:2097-2105. http://dx.doi.org/10.1007/s00253-010-2694-0.
-
(2010)
Appl. Microbiol. Biotechnol.
, vol.87
, pp. 2097-2105
-
-
Mirande, C.1
Mosoni, P.2
Béra-Maillet, C.3
Bernalier-Donadille, A.4
Forano, E.5
-
39
-
-
84855173898
-
Recognition and degradation of plant cell wall polysaccharides by two human gut symbionts
-
Martens EC, Low EC, Chiang H, Pudlo NA, Wu M, McNulty NP, Abbott DW, Henrissat B, Gilbert HJ, Bolam DN, Gordon JI. 2011. Recognition and degradation of plant cell wall polysaccharides by two human gut symbionts. PLoS Biol. 9:e1001221. http://dx.doi.org/10.1371/journal.pbio.1001221.
-
(2011)
PLoS Biol.
, vol.9
-
-
Martens, E.C.1
Low, E.C.2
Chiang, H.3
Pudlo, N.A.4
Wu, M.5
McNulty, N.P.6
Abbott, D.W.7
Henrissat, B.8
Gilbert, H.J.9
Bolam, D.N.10
Gordon, J.I.11
-
40
-
-
77954730922
-
Animal-toanimal variation in fecal microbial diversity among beef cattle
-
Durso LM, Harhay GP, Smith TPL, Bono JL, DeSantis TZ, Harhay DM, Andersen GL, Keen JE, Laegreid WW, Clawson ML. 2010. Animal-toanimal variation in fecal microbial diversity among beef cattle. Appl. Environ. Microbiol. 76:4858-4862. http://dx.doi.org/10.1128/AEM.00207-10.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 4858-4862
-
-
Durso, L.M.1
Harhay, G.P.2
Smith, T.P.L.3
Bono, J.L.4
DeSantis, T.Z.5
Harhay, D.M.6
Andersen, G.L.7
Keen, J.E.8
Laegreid, W.W.9
Clawson, M.L.10
-
41
-
-
84875055328
-
Major phenylpropanoid-derived metabolites in the human gut can arise from microbial fermentation of protein
-
Russell WR, Duncan SH, Scobbie L, Duncan G, Cantlay L, Calder AG, Anderson SE, Flint HJ. 2013. Major phenylpropanoid-derived metabolites in the human gut can arise from microbial fermentation of protein. Mol. Nutr. Food Res. 57:523-535. http://dx.doi.org/10.1002/mnfr.201200594.
-
(2013)
Mol. Nutr. Food Res.
, vol.57
, pp. 523-535
-
-
Russell, W.R.1
Duncan, S.H.2
Scobbie, L.3
Duncan, G.4
Cantlay, L.5
Calder, A.G.6
Anderson, S.E.7
Flint, H.J.8
-
42
-
-
33748294515
-
First isolation of Dysgonomonas mossii from intestinal juice of a patient with pancreatic cancer
-
Matsumoto T, Kawakami Y, Oana K, Honda T, Yamauchi K, Okimura Y, Siohara M, Kauga E. 2006. First isolation of Dysgonomonas mossii from intestinal juice of a patient with pancreatic cancer. Arch. Med. Res. 37: 914-916. http://dx.doi.org/10.1016/j.arcmed.2006.05.002.
-
(2006)
Arch. Med. Res.
, vol.37
, pp. 914-916
-
-
Matsumoto, T.1
Kawakami, Y.2
Oana, K.3
Honda, T.4
Yamauchi, K.5
Okimura, Y.6
Siohara, M.7
Kauga, E.8
-
43
-
-
84870882909
-
Dysgonomonas oryzarvi sp. nov., isolated from a microbial fuel cell
-
Kodama Y, Shimoyama T, Watanabe K. 2012. Dysgonomonas oryzarvi sp. nov., isolated from a microbial fuel cell. Int. J. Syst. Evol. Microbiol. 62:3055-3059. http://dx.doi.org/10.1099/ijs.0.039040-0.
-
(2012)
Int. J. Syst. Evol. Microbiol.
, vol.62
, pp. 3055-3059
-
-
Kodama, Y.1
Shimoyama, T.2
Watanabe, K.3
-
44
-
-
0034030164
-
Fermentation of plant cell wall derived polysaccharides their corresponding oligosaccharides by intestinal bacteria.
-
Van Laere KMJ, Hartemink R, Bosveld M, Schols HA, Voragen AGJ. 2000 Fermentation of plant cell wall derived polysaccharides and their corresponding oligosaccharides by intestinal bacteria. J. Agric. Food Chem. 48:1644-1652. http://dx.doi.org/10.1021/jf990519i.
-
(2000)
J. Agric. Food Chem.
, vol.48
, pp. 1644-1652
-
-
Van Laere, K.M.J.1
Hartemink, R.2
Bosveld, M.3
Schols, H.A.4
Voragen, A.G.J.5
-
45
-
-
70350223811
-
Approaches to the study of the systematics of anaerobic, Gram-negative, non-sporeforming rods: current status and perspectives
-
Shah HN, Olsen I, Bernard K, Finegold SM, Gharbia S, Gupta RS. 2009. Approaches to the study of the systematics of anaerobic, Gram-negative, non-sporeforming rods: current status and perspectives. Anaerobe 15: 179-194. http://dx.doi.org/10.1016/j.anaerobe.2009.08.003.
-
(2009)
Anaerobe
, vol.15
, pp. 179-194
-
-
Shah, H.N.1
Olsen, I.2
Bernard, K.3
Finegold, S.M.4
Gharbia, S.5
Gupta, R.S.6
-
46
-
-
78149272756
-
Prebiotic effects: metabolic and health benefits.
-
Roberfroid M, Gibson GR, Hoyles L, McCartney AL, Rastall R, Rowland I, Wolvers D, Watzi B, Szajewska H, Stahl B, Guamer F, Respondek F, Whelan K, Coxam V, Davicco M-J, Léotoing L, Wittrant Y, Delzenne NM, Cani PD, Neyrinck AM, Meheust A. 2010. Prebiotic effects: metabolic and health benefits. Br. J. Nutr. 104(Suppl 2):S1-S63. http://dx.doi.org/10.1017/S0007114510003363.
-
(2010)
Br. J. Nutr
, vol.104
, Issue.SUPPL. 2
-
-
Roberfroid, M.1
Gibson, G.R.2
Hoyles, L.3
McCartney, A.L.4
Rastall, R.5
Rowland, I.6
Wolvers, D.7
Watzi, B.8
Szajewska, H.9
Stahl, B.10
Guamer, F.11
Respondek, F.12
Whelan, K.13
Coxam, V.14
Davicco, M.-J.15
Léotoing, L.16
Wittrant, Y.17
Delzenne, N.M.18
Cani, P.D.19
Neyrinck, A.M.20
Meheust, A.21
more..
-
47
-
-
0024239470
-
Contribution of the microflora to proteolysis in the human large intestine
-
Macfarlane GT, Allison C, Gibson SAW, Cummings JH. 1988. Contribution of the microflora to proteolysis in the human large intestine. J. Appl. Bacteriol. 64:37-46. http://dx.doi.org/10.1111/j.1365-2672.1988.tb02427.x.
-
(1988)
J. Appl. Bacteriol.
, vol.64
, pp. 37-46
-
-
Macfarlane, G.T.1
Allison, C.2
Gibson, S.A.W.3
Cummings, J.H.4
-
48
-
-
0942279586
-
Molecular ecological analysis of the gastrointestinal microbiota: a review
-
Zoetendal EG, Collier CT, Koike S, Mackie RI, Gaskins HR. 2004. Molecular ecological analysis of the gastrointestinal microbiota: a review. J. Nutr. 134:465-472.
-
(2004)
J. Nutr.
, vol.134
, pp. 465-472
-
-
Zoetendal, E.G.1
Collier, C.T.2
Koike, S.3
Mackie, R.I.4
Gaskins, H.R.5
-
49
-
-
77949918515
-
Phylogeny, diversity and host specialization in the phylum Synergistetes with emphasis on strains and clones of human origin
-
Marchandin H, Damay A, Roudière L, Teyssier C, Zorgniotti I, Dechaud H, Jean-Pierre H, Jumas-Bilak E. 2010. Phylogeny, diversity and host specialization in the phylum Synergistetes with emphasis on strains and clones of human origin. Res. Microbiol. 161:91-100. http://dx.doi.org/10.1016/j.resmic.2009.12.008.
-
(2010)
Res. Microbiol.
, vol.161
, pp. 91-100
-
-
Marchandin, H.1
Damay, A.2
Roudière, L.3
Teyssier, C.4
Zorgniotti, I.5
Dechaud, H.6
Jean-Pierre, H.7
Jumas-Bilak, E.8
-
50
-
-
0018406694
-
Comparison of bacterial populations of the pig cecum and colon based upon enumeration with specific energy sources
-
Allison MJ, Robinson IM, Bucklin JA, Booth GD. 1979. Comparison of bacterial populations of the pig cecum and colon based upon enumeration with specific energy sources. Appl. Environ. Microbiol. 37: 1142-1151.
-
(1979)
Appl. Environ. Microbiol.
, vol.37
, pp. 1142-1151
-
-
Allison, M.J.1
Robinson, I.M.2
Bucklin, J.A.3
Booth, G.D.4
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