Multiplex profiling of glycoproteins using a novel bead-based lectin array

Proteomics

Volumn 14, Issue 1, 2014, Pages 78-86

  Wang, Hong ^a,b   Li, Hong ^a   Zhang, Wei ^a   Wei, Liming ^a   Yu, Hongxiu ^a   Yang, Pengyuan ^a  

^a FUDAN UNIVERSITY   (China)

^b SHANGHAI INSTITUTE FOR FOOD AND DRUG CONTROL   (China)

Author keywords

Bead based lectin array; Glycan profiling; Glycoproteomics; Multiplexed assay; Sensitivity

Indexed keywords

AGGLUTININ; ASIALOFETUIN; FLUORESCENT DYE; GLYCOPROTEIN; IMMUNOGLOBULIN G; LECTIN;

ANTIGEN RECOGNITION; ARTICLE; FUCOSYLATION; LIVER CELL CARCINOMA; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN GLYCOSYLATION; PROTEIN MICROARRAY; RICINUS COMMUNIS; SENSITIVITY ANALYSIS; SIALYLATION;

BEAD-BASED LECTIN ARRAY; GLYCAN PROFILING; GLYCOPROTEOMICS; MULTIPLEXED ASSAY; SENSITIVITY;

GLYCOPROTEINS; HUMANS; IMMUNOGLOBULIN G; LECTINS; LIMIT OF DETECTION; LIVER NEOPLASMS; MICROSPHERES; PROTEOMICS; REPRODUCIBILITY OF RESULTS;

EID: 84892394676     PISSN: 16159853     EISSN: 16159861     Source Type: Journal    
DOI: 10.1002/pmic.201200544     Document Type: Article

References (31)

1. Geyer, R., Geyer, H., Strategies for analysis of glycoprotein glycosylation. Biochim. Biophys. Acta 2006, 1764, 1853-1869.
2. Ang, I. L., Poon, T. C., Lai, P. B., Chan, A. T. et al., Study of serum haptoglobin and its glycoforms in the diagnosis of hepatocellular carcinoma: a glycoproteomic approach. J. Proteome Res. 2006, 5, 2691-2700.
3. Wuhrer, M., Porcelijn, L., Kapur, R., Koeleman, C. A. et al., Regulated glycosylation patterns of IgG during alloimmune responses against human platelet antigens. J. Proteome Res. 2009, 8, 450-456.
4. Uchiyama, N., Kuno, A., Tateno, H., Kubo, Y. et al., Optimization of evanescent-field fluorescence-assisted lectin microarray for high-sensitivity detection of monovalent oligosaccharides and glycoproteins. Proteomics 2008, 8, 3042-3050.
5. Tao, S. C., Li, Y., Zhou, J., Qian, J. et al., Lectin microarrays identify cell-specific and functionally significant cell surface glycan markers. Glycobiology 2008, 18, 761-769.
6. Hsu, K. L., Pilobello, K. T., Mahal, L. K., Analyzing the dynamic bacterial glycome with a lectin microarray approach. Nat. Chem. Biol. 2006, 2, 153-157.
7. Kuno, A., Ikehara, Y., Tanaka, Y., Angata, T. et al., Multilectin assay for detecting fibrosis-specific glyco-alteration by means of lectin microarray. Clin. Chem. 2011, 57, 48-56.
8. Li, Y., Tao, S. C., Bova, G. S., Liu, A. Y. et al., Detection and verification of glycosylation patterns of glycoproteins from clinical specimens using lectin microarrays and lectin-based immunosorbent assays. Anal. Chem. 2011, 83, 8509-8516.
9. Kuno, A., Uchiyama, N., Koseki-Kuno, S., Ebe, Y. et al., Evanescent-field fluorescence-assisted lectin microarray: a new strategy for glycan profiling. Nat. Methods 2005, 2, 851-856.
10. Meany, D. L., Hackler, L., Jr., Zhang, H., Chan, D. W., Tyramide signal amplification for antibody-overlay lectin microarray: a strategy to improve the sensitivity of targeted glycan profiling. J. Proteome Res. 2011, 10, 1425-1431.
11. Pilobello, K. T., Slawek, D. E., Mahal, L. K., A ratiometric lectin microarray approach to analysis of the dynamic mammalian glycome. Proc. Natl. Acad. Sci. USA 2007, 104, 11534-11539.
12. Leipold, M. D., Herrera, I., Ornatsky, O., Baranov, V., Nitz, M., ICP-MS-based multiplex profiling of glycoproteins using lectins conjugated to lanthanide-chelating polymers. J. Proteome Res. 2009, 8, 443-449.
13. Koshi, Y., Nakata, E., Yamane, H., Hamachi, I., A fluorescent lectin array using supramolecular hydrogel for simple detection and pattern profiling for various glycoconjugates. J. Am. Chem. Soc. 2006, 128, 10413-10422
14. Chergui, F., Chretien, A. S., Bouali, S., Ramacci, C. et al., Validation of a phosphoprotein array assay for characterization of human tyrosine kinase receptor downstream signaling in breast cancer. Clin. Chem. 2009, 55, 1327-1336.
15. Li, C., Zolotarevsky, E., Thompson, I., Anderson, M. A. et al., A multiplexed bead assay for profiling glycosylation patterns on serum protein biomarkers of pancreatic cancer. Electrophoresis 2011, 32, 2028-2035.
16. Yamamoto, K., Ito, S., Yasukawa, F., Konami, Y., Matsumoto, N., Measurement of the carbohydrate-binding specificity of lectins by a multiplexed bead-based flow cytometric assay. Anal. Biochem. 2005, 336, 28-38.
17. Yamamoto, K., Yasukawa, F., Ito, S., Measurement of the sugar-binding specificity of lectins using multiplexed bead-based suspension arrays. Methods Mol. Biol. 2007, 381, 401-409.
18. Choi, E., Loo, D., Dennis, J.W., Hill, M.M. et al., High-throughput lectin magnetic bead array-coupled tandem mass spectrometry for glycoprotein biomarker discovery. Electrophoresis 2011, 32, 3564-3575
19. Loo, D., Jones, A., Hill, M.M., Lectin magnetic bead array for biomarker discovery. J. Proteome Res., 2010, 9, 5496- 5500
20. Kuno, A., Kato, Y., Matsuda, A., Kaneko, M. K. et al., Focused differential glycan analysis with the platform antibody-assisted lectin profiling for glycan-related biomarker verification. Mol. Cell. Proteomics 2009, 8, 99-108.
21. Gao, J., Liu, D., Wang, Z., Screening lectin-binding specificity of bacterium by lectin microarray with gold nanoparticle probes. Anal. Chem. 2010, 82, 9240-9247.
22. Li, H., Leulmi, R. F., Juncker, D., Hydrogel droplet microarrays with trapped antibody functionalized beads for multiplexed protein analysis. Lab Chip 2011, 11, 528-534.
23. Li, X., Gao, J., Liu, D., Wang, Z., Studying the interaction of carbohydrate-protein on the dendrimer-modified solid support by microarray-based plasmon resonance light scattering assay. Analyst 2011, 136, 4301-4307.
24. Gray, J. S., Yang, B. Y., Montgomery, R., Heterogeneity of glycans at each N-glycosylation site of horseradish peroxidase. Carbohydr. Res. 1998, 311, 61-69.
25. Knibbs, R. N., Perini, F., Goldstein, I. J., Structure of the major concanavalin A reactive oligosaccharides of the extracellular matrix component laminin. Biochemistry 1989, 28, 6379-6392.
26. Henning, S., Peter-Katalinic, J., Pohlentz, G., Structure elucidation of glycoproteins by direct nanoESI MS and MS/MS analysis of proteolytic glycopeptides. J. Mass Spectrom. 2007, 42, 1415-1421.
27. Huhn, C., Selman, M. H., Ruhaak, L. R., Deelder, A. M., Wuhrer, M., IgG glycosylation analysis. Proteomics 2009, 9, 882-913.
28. Wuhrer, M., Porcelijn, L., Kapur, R., Vidarsson, G. et al., Regulated glycosylation patterns of IgG during alloimmune responses against human platelet antigens. J. Proteome Res. 2009, 8, 450-456
29. Wilson, J. F., Rudan, I., Wuhrer, M., Rudd, Gornik, O. et al., High throughput isolation and glycosylation analysis of IgG-variability and heritability of the IgG glycome in three isolated human populations. Mol. Cell. Proteomics 10, M111 010090.
30. Mantovani, A., Allavena, P., Sica, A., Balkwill, F., Cancer-related inflammation. Nature 2008, 454, 436-444.
31. Miyoshi, E., Noda, K., Ko, J. H., Ekuni, A. et al., Overexpression of alpha1-6 fucosyltransferase in hepatoma cells suppresses intrahepatic metastasis after splenic injection in athymic mice. Cancer Res. 1999, 59, 2237-2243.