A multiplexed bead assay for profiling glycosylation patterns on serum protein biomarkers of pancreatic cancer

Electrophoresis

Volumn 32, Issue 15, 2011, Pages 2028-2035

  Li, Chen ^a   Zolotarevsky, Eugene ^b   Thompson, Ian ^c   Anderson, Michelle A ^b   Simeone, Diane M ^b   Casper, John M ^d   Mullenix, Michael C ^d   Lubman, David M ^a,b,e  

^a UNIVERSITY OF MICHIGAN   (United States)

^b UNIVERSITY OF MICHIGAN HEALTH SYSTEM   (United States)

^c UNIVERSITY OF TEXAS AT SAN ANTONIO   (United States)

^d Assay Designs Inc ^*  (United States)

^e UNIVERSITY OF MICHIGAN COMPREHENSIVE CANCER CENTER   (United States)

Author keywords

Antibody; Bead based multiplexed assay; Biomarker; Cancer; Glycoproteins

Indexed keywords

ANTIBODIES; ASSAYS; BIOMARKERS; BODY FLUIDS; DISEASES; FLUORESCENCE; GLYCOPROTEINS;

BEAD-BASED; BEAD-BASED MULTIPLEXED ASSAY; CANCER; GLYCOSYLATIONS; MULTIPLEX ASSAYS; NORMAL CONTROLS; P-VALUES; PANCREATIC CANCERS; SERUM AMYLOID P; SERUM PROTEINS;

GLYCOSYLATION;

ALPHA 1 BETA GLYCOPROTEIN; ANTIBODY; GLYCAN; GLYCAN ANTIBODY; GLYCOPROTEIN; LECTIN; PLASMA PROTEIN; PROTEIN ANTIBODY; PROTEIN SNA; SERUM AMYLOID P; SIGNALING LYMPHOCYTE ACTIVATION MOLECULE ASSOCIATED PROTEIN; TUMOR MARKER; UNCLASSIFIED DRUG;

ADULT; AGED; ARTICLE; ASSAY; CHRONIC PANCREATITIS; CLINICAL ARTICLE; CONTROLLED STUDY; DIAGNOSTIC VALUE; DIFFERENTIAL DIAGNOSIS; FEMALE; FLUORESCENT ANTIBODY TECHNIQUE; HIGH THROUGHPUT SCREENING; HUMAN; HUMAN TISSUE; KIDNEY CARCINOMA; LECTIN BINDING; MALE; MOLECULAR DOCKING; MOLECULAR PROBE; MULTIPLEXED BEAD ASSAY; PANCREAS ADENOCARCINOMA; PROTEIN BLOOD LEVEL; PROTEIN DETERMINATION; PROTEIN GLYCOSYLATION; REPRODUCIBILITY;

EID: 79960723943     PISSN: 01730835     EISSN: 15222683     Source Type: Journal    
DOI: 10.1002/elps.201000693     Document Type: Article

References (33)

1. Kameyama, A., Kaneda, Y., Yamanaka, H., Yoshimine, H., Narimatsu, H., Shinohara, Y., Anal. Chem. 2004, 76, 4537-4542.
2. Nilsson, B., Mol. Biotechnol. 1994, 2, 243-280.
3. Wada, Y., Tajiri, M., Yoshida, S., Anal. Chem. 2004, 76, 6560-6565.
4. Imre, T., Schlosser, G., Pocsfalvi, G., Siciliano, R., J. Mass Spectrom. 2005, 40, 1472-1483.
5. Kameyama, A., Kikuchi, N., Nakaya, S., Ito, H., Sato, T., Shikanai, T., Takahashi, Y., Takahashi, K., Narimatsu, H., Anal. Chem. 2005, 77, 4719-4725.
6. Palm, A. K., Novotny, M. V., Rapid Commun. Mass Spectrom. 2005, 19, 1730-1738.
7. Yu, Y. Q., Gilar, M., Kaska, J., Gebler, J. C., Rapid Commun. Mass Spectrom. 2005, 19, 2331-2336.
8. Zhao, J., Simeone, D. M., Heidt, D., Anderson, M. A., Lubman, D. M., J. Proteome Res. 2006, 5, 1792-1802.
9. Reis, C. A., Osorio, H., Silva, L., Gomes, C., David, L., J. Clin. Pathol. 2010, 63, 322-329.
10. Plavina, T., Wakshull, E., Hancock, W. S., Hincapie, M. J., Proteome Res. 2007, 2, 662-671.
11. Gorelik, E., Galili, U., Raz, A., Cancer Metastasis Rev. 2001, 20, 245-277.
12. Hakomori, S., Adv. Cancer Res. 1989, 52, 257-331.
13. Drake, R. R., Schwegler, E. E., Malik, G., Diaz, J., Block, T., Mehta, A., Semmes, O. J., Mol. Cell. Proteomics 2006, 10, 1957-1967.
14. Kobata, A., Amano, J., Immunol. Cell Biol. 2005, 83, 429-439.
15. Balzarini, J., Nat. Rev. Microbiol. 2007, 8, 583-597.
16. Kellokumpu, S., Sormunen, R., Kellokumpu, M., FEBS Lett. 2002, 516, 217-224.
17. Peracaula, R., Tabares, G., Royle, L., Harvey, D. J., Dwek, R. A., Rudd, P. M., de Llorens, R. A., Glycobiology 2003, 13, 457-470.
18. Jemal, A., Tiwari, R. C., Murray, T., Ghafoor, A., Samuels, A., Ward, E., Feuer, E. J., Thun, M. J., CA Cancer J. Clin. 2004, 54, 8-29.
19. Sohn, T. A., Lillemoe, K. D., Cameron, J. L., Huang, J. J., Pitt, H. A., Yeo, C. J. J., Am. Coll. Surg. 1999, 188, 658-666.
20. Larghi, A., Verna, E. C., Lecca, P. G., Costamagna, G., Clin. Cancer Res. 2009, 15, 1907-1914.
21. Dalgleish, A. G., Br. Med. J. 2000, 321, 380-380.
22. Nazli, O., Bozdag, A. D., Tansug, T., Kir, R., Kaymak, E., Hepatogastroenterology 2000, 47, 1750-1752.
23. Goggins, M., J. Clin. Oncol. 2005, 23, 4524-4531.
24. Grantzdorffer, I., Carl-McGrath, S., Ebert, M. P., Rocken, C., Pancreas 2008, 36, 329-336.
25. Vimalachandran, D., Costello, E., Expert. Rev. Proteomics 2004, 1, 493-501.
26. Yu, K. H., Barry, C. G., Austin, D., Busch, C. M., Sangar, V., Rustgi, A. K., Blair, I. A., J. Proteome. Res. 2009, 8, 1565-1576.
27. Faca, V. M., Song, K. S., Wang, H., Zhang, Q., Krasnoselsky, A. L., Newcomb, L. F., Plentz, R. R., Gurumurthy, S., Redston, M. S., Pitteri, S. J., Pereira-Faca, S. R., Ireton, R. C., Katayama, H., Glukhova, V., Phanstiel, D., Brenner, D. E., Anderson, M. A., Misek, D., Scholler, N., Urban, N. D., Barnett, M. J., Edelstein, C., Goodman, G. E., Thornquist, M. D., McIntosh, M. W., DePinho, R. A., Bardeesy, N., Hanash, S. M., PLoS. Med. 2008, 5, e123.
28. Zhao, J., Patwa, T. H., Qiu, W. L., Shedden, K., Hinderer, R., Misek, D. E., Anderson, M. A., Simeone, D. M., Lubman, D. M., J. Proteome Res. 2007, 5, 1864-1874.
29. Wu, Y. M., Nowack, D. D., Omenn, G. S., Haab, B. B., J. Proteome Res. 2009, 8, 1876-1886.
30. Li, C., Simeone, D. M., Brenner, D. E., Anderson, M. A., Shedden, K. A., Ruffin, M. T., Lubman, D. M., J. Proteome Res. 2009, 8, 483-492.
31. Chen, S. M., LaRoche, T., Hamelinck, D., Bergsma, D., Brenner, D., Simeone, D., Brand, R. E., Haab, B. B., Nat. Methods 2007, 5, 437-444.
32. Joos, T. O., Stoll, D., Templin, M. F., Curr. Opin. Chem. Biol. 2002, 6, 76-80.
33. Morgan, E., Varro, R., Sepulveda, H., Ember, J. A., Apgar, J., Wilson, J., Lowe, L., Chen, R., Shivraj, L., Agadir, A., Campos, R., Ernst, D., Gaur, A., Clin. Immunol. 2004, 110, 252-266.