-
1
-
-
0034060037
-
The human genome project-an overview
-
Bentley DR (2000) The Human Genome Project-an overview. Medicinal research reviews 20: 189-96.
-
(2000)
Medicinal Research Reviews
, vol.20
, pp. 189-196
-
-
Bentley, D.R.1
-
2
-
-
84865790047
-
An integrated encyclopedia of DNA elements in the human genome
-
Dunham I, Kundaje A, Aldred SF, Collins PJ, Davis Ca, et al. (2012) An integrated encyclopedia of DNA elements in the human genome. Nature 489: 57-74.
-
(2012)
Nature
, vol.489
, pp. 57-74
-
-
Dunham, I.1
Kundaje, A.2
Aldred, S.F.3
Collins, P.J.4
Ca, D.5
-
3
-
-
84865739425
-
Architecture of the human regulatory network derived from ENCODE data
-
Gerstein MB, Kundaje A, Hariharan M, Landt SG, Yan KK, et al. (2012) Architecture of the human regulatory network derived from ENCODE data. Nature 489: 91-100.
-
(2012)
Nature
, vol.489
, pp. 91-100
-
-
Gerstein, M.B.1
Kundaje, A.2
Hariharan, M.3
Landt, S.G.4
Yan, K.K.5
-
4
-
-
84862203775
-
WikiPathways: Building research communities on biological pathways
-
Kelder T, van Iersel MP, Hanspers K, Kutmon M, Conklin BR, et al. (2012) WikiPathways: building research communities on biological pathways. Nucleic acids research 40: D1301-7.
-
(2012)
Nucleic Acids Research
, vol.40
-
-
Kelder, T.1
Van Iersel, M.P.2
Hanspers, K.3
Kutmon, M.4
Conklin, B.R.5
-
5
-
-
78651275182
-
Reactome: A database of reactions, pathways and biological processes
-
Croft D, O'Kelly G, Wu G, Haw R, Gillespie M, et al. (2011) Reactome: a database of reactions, pathways and biological processes. Nucleic acids research 39: D691-7.
-
(2011)
Nucleic Acids Research
, vol.39
-
-
Croft, D.1
O'kelly, G.2
Wu, G.3
Haw, R.4
Gillespie, M.5
-
6
-
-
79551587720
-
Cytoscape 2.8: New features for data integration and network visualization
-
Smoot ME, Ono K, Ruscheinski J, Wang PL, Ideker T (2011) Cytoscape 2.8: new features for data integration and network visualization. Bioinformatics (Oxford, England) 27: 431-2.
-
(2011)
Bioinformatics (Oxford, England)
, vol.27
, pp. 431-432
-
-
Smoot, M.E.1
Ono, K.2
Ruscheinski, J.3
Wang, P.L.4
Ideker, T.5
-
7
-
-
84869054051
-
A travel guide to Cytoscape plugins
-
Saito R, Smoot ME, Ono K, Ruscheinski J, Wang PL, et al. (2012) A travel guide to Cytoscape plugins. Nature Methods 9: 1069-1076.
-
(2012)
Nature Methods
, vol.9
, pp. 1069-1076
-
-
Saito, R.1
Smoot, M.E.2
Ono, K.3
Ruscheinski, J.4
Wang, P.L.5
-
8
-
-
84881487872
-
Ensembl 2013
-
Flicek P, Ahmed I, Amode MR, Barrell D, Beal K, et al. (2012) Ensembl 2013. Nucleic acids research.
-
(2012)
Nucleic Acids Research
-
-
Flicek, P.1
Ahmed, I.2
Amode, M.R.3
Barrell, D.4
Beal, K.5
-
9
-
-
78651293534
-
MiRBase: Integrating microRNA annotation and deepsequencing data
-
Kozomara A, Griffiths-Jones S (2011) miRBase: integrating microRNA annotation and deepsequencing data. Nucleic acids research 39: D152-7.
-
(2011)
Nucleic Acids Research
, vol.39
-
-
Kozomara, A.1
Griffiths-Jones, S.2
-
10
-
-
78651287426
-
DrugBank 3.0: A comprehensive resource for 'omics' research on drugs
-
Knox C, Law V, Jewison T, Liu P, Ly S, et al. (2011) DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Nucleic acids research 39: D1035-41.
-
(2011)
Nucleic Acids Research
, vol.39
-
-
Knox, C.1
Law, V.2
Jewison, T.3
Liu, P.4
Ly, S.5
-
11
-
-
77349123063
-
The BridgeDb framework: Standardized access to gene, protein and metabolite identifier mapping services
-
van Iersel MP, Pico AR, Kelder T, Gao J, Ho I, et al. (2010) The BridgeDb framework: standardized access to gene, protein and metabolite identifier mapping services. BMC bioinformatics 11: 5.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 5
-
-
Van Iersel, M.P.1
Pico, A.R.2
Kelder, T.3
Gao, J.4
Ho, I.5
-
12
-
-
33846062023
-
Database resources of the National Center for Biotechnology Information
-
DOI 10.1093/nar/gkl1031
-
Wheeler DL, Barrett T, Benson DA, Bryant SH, Canese K, et al. (2007) Database resources of the national center for biotechnology information. Nucleic acids research 35: D5-D12. (Pubitemid 46056160)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.SUPPL. 1
-
-
Wheeler, D.L.1
Barrett, T.2
Benson, D.A.3
Bryant, S.H.4
Canese, K.5
Chetvernin, V.6
Church, D.M.7
DiCuccio, M.8
Edgar, R.9
Federhen, S.10
Geer, L.Y.11
Kapustin, Y.12
Khovayko, O.13
Landsman, D.14
Lipman, D.J.15
Madden, T.L.16
Maglott, D.R.17
Ostell, J.18
Miller, V.19
Pruitt, K.D.20
Schuler, G.D.21
Sequeira, E.22
Sherry, S.T.23
Sirotkin, K.24
Souvorov, A.25
Starchenko, G.26
Tatusov, R.L.27
Tatusova, T.A.28
Wagner, L.29
Yaschenko, E.30
more..
-
13
-
-
84860833500
-
Reorganizing the protein space at the universal protein resource (UniProt)
-
The UniProt Consortium (2012) Reorganizing the protein space at the Universal Protein Resource (UniProt). Nucleic acids research 40: D71-5.
-
(2012)
The UniProt Consortium Nucleic Acids Research
, vol.40
-
-
-
14
-
-
84860417551
-
New type 2 diabetes risk genes provide new insights in insulin secretion mechanisms
-
Supple
-
Schä fer SA, Machicao F, Fritsche A, Hä ring HU, Kantartzis K (2011) New type 2 diabetes risk genes provide new insights in insulin secretion mechanisms.Diabetes Research and Clinical Practice 93, Supple: S9-S24.
-
(2011)
Diabetes Research and Clinical Practice
, vol.93
-
-
Schä Fer, S.A.1
Machicao, F.2
Fritsche, A.3
Hä Ring, H.U.4
Kantartzis, K.5
-
15
-
-
67849129132
-
The MeSH translation maintenance system: Structure, interface design, and implementation
-
Nelson SJ, Schopen M, Savage AG, Schulman JL, Arluk N (2004) The MeSH translation maintenance system: structure, interface design, and implementation. Studies in health technology and informatics 107: 67-9.
-
(2004)
Studies in Health Technology and Informatics
, vol.107
, pp. 67-69
-
-
Nelson, S.J.1
Schopen, M.2
Savage, A.G.3
Schulman, J.L.4
Arluk, N.5
-
17
-
-
84876515907
-
String v9 1: Proteinprotein interaction networks, with increased coverage and integration
-
Franceschini A, Szklarczyk D, Frankild S, Kuhn M, Simonovic M, et al. (2013) String v9. 1: proteinprotein interaction networks, with increased coverage and integration. Nucleic acids research 41: D808-D815.
-
(2013)
Nucleic Acids Research
, vol.41
-
-
Franceschini, A.1
Szklarczyk, D.2
Frankild, S.3
Kuhn, M.4
Simonovic, M.5
-
18
-
-
80054764011
-
Ppara is regulated by mir-21 and mir-27b in human liver
-
Kida K, Nakajima M, Mohri T, Oda Y, Takagi S, et al. (2011) Ppara is regulated by mir-21 and mir-27b in human liver. Pharmaceutical research 28: 2467-2476.
-
(2011)
Pharmaceutical Research
, vol.28
, pp. 2467-2476
-
-
Kida, K.1
Nakajima, M.2
Mohri, T.3
Oda, Y.4
Takagi, S.5
-
19
-
-
84855518254
-
Control of glucose homeostasis and insulin sensitivity by the let-7 family of micrornas
-
Frost RJ, Olson EN (2011) Control of glucose homeostasis and insulin sensitivity by the let-7 family of micrornas. Proceedings of the National Academy of Sciences 108: 21075-21080.
-
(2011)
Proceedings of the National Academy of Sciences
, vol.108
, pp. 21075-21080
-
-
Frost, R.J.1
Olson, E.N.2
-
20
-
-
1842584947
-
Applied bioinformatics for the identification of regulatory elements
-
DOI 10.1038/nrg1315
-
Wasserman WW, Sandelin A (2004) Applied bioinformatics for the identification of regulatory elements. Nature reviews Genetics 5: 276-87. (Pubitemid 38435623)
-
(2004)
Nature Reviews Genetics
, vol.5
, Issue.4
, pp. 276-287
-
-
Wasserman, W.W.1
Sandelin, A.2
-
21
-
-
78149262301
-
GeneMANIA Cytoscape plugin: Fast gene function predictions on the desktop
-
Montojo J, Zuberi K, Rodriguez H, Kazi F, Wright G, et al. (2010) GeneMANIA Cytoscape plugin: fast gene function predictions on the desktop. Bioinformatics (Oxford, England) 26: 2927-8.
-
(2010)
Bioinformatics (Oxford, England)
, vol.26
, pp. 2927-2928
-
-
Montojo, J.1
Zuberi, K.2
Rodriguez, H.3
Kazi, F.4
Wright, G.5
-
22
-
-
48349105261
-
WikiPathways: Pathway editing for the people
-
Pico AR, Kelder T, van Iersel MP, Hanspers K, Conklin BR, et al. (2008) WikiPathways: pathway editing for the people. PLoS biology 6: e184.
-
(2008)
PLoS Biology
, vol.6
-
-
Pico, A.R.1
Kelder, T.2
Van Iersel, M.P.3
Hanspers, K.4
Conklin, B.R.5
-
23
-
-
0034600849
-
The ErbB signaling network: Receptor heterodimerization in development and cancer
-
Olayioye MA, Neve RM, Lane HA, Hynes NE (2000) The ErbB signaling network: receptor heterodimerization in development and cancer. The EMBO journal 19: 3159-67. (Pubitemid 30428195)
-
(2000)
EMBO Journal
, vol.19
, Issue.13
, pp. 3159-3167
-
-
Olayioye, M.A.1
Neve, R.M.2
Lane, H.A.3
Hynes, N.E.4
-
24
-
-
84874741556
-
Cluepedia cytoscape plugin: Pathway insights using integrated experimental and in silico data
-
Bindea G, Galon J, Mlecnik B (2013) Cluepedia cytoscape plugin: pathway insights using integrated experimental and in silico data. Bioinformatics 29: 661-663.
-
(2013)
Bioinformatics
, vol.29
, pp. 661-663
-
-
Bindea, G.1
Galon, J.2
Mlecnik, B.3
-
25
-
-
33847296282
-
BioNetBuilder: Automatic integration of biological networks
-
DOI 10.1093/bioinformatics/btl604
-
Avila-Campillo I, Drew K, Lin J, Reiss DJ, Bonneau R (2007) BioNetBuilder: automatic integration of biological networks. Bioinformatics (Oxford, England) 23: 392-3. (Pubitemid 46323169)
-
(2007)
Bioinformatics
, vol.23
, Issue.3
, pp. 392-393
-
-
Avila-Campillo, I.1
Lin, J.2
Reiss, D.J.3
Bonneau, R.4
-
26
-
-
64549104807
-
ClueGO: A Cytoscape plugin to decipher functionally grouped gene ontology and pathway annotation networks
-
Bindea G, Mlecnik B, Hackl H, Charoentong P, Tosolini M, et al. (2009) ClueGO: a Cytoscape plugin to decipher functionally grouped gene ontology and pathway annotation networks. Bioinformatics (Oxford, England) 25: 1091-3.
-
(2009)
Bioinformatics (Oxford, England)
, vol.25
, pp. 1091-1093
-
-
Bindea, G.1
Mlecnik, B.2
Hackl, H.3
Charoentong, P.4
Tosolini, M.5
-
27
-
-
72449137138
-
MicroRNAs as Novel Biomarkers for Breast Cancer
-
Heneghan HM, Miller N, Lowery AJ, Sweeney KJ, Kerin MJ (2009) MicroRNAs as Novel Biomarkers for Breast Cancer. Journal of oncology 2009: 950201.
-
(2009)
Journal of Oncology
, vol.2009
, pp. 950201
-
-
Heneghan, H.M.1
Miller, N.2
Lowery, A.J.3
Sweeney, K.J.4
Kerin, M.J.5
-
28
-
-
84908092028
-
MiRò: A miRNA knowledge base
-
2009: bap008
-
Laganà A, Forte S, Giudice A, Arena MR, Puglisi PL, et al. (2009) miRò: a miRNA knowledge base. Database : the journal of biological databases and curation 2009: bap008.
-
(2009)
Database the Journal of Biological Databases and Curation
-
-
Laganà, A.1
Forte, S.2
Giudice, A.3
Arena, M.R.4
Puglisi, P.L.5
|