-
1
-
-
60149088848
-
Origins and mechanisms of miRNAs and siRNAs
-
Carthew RW, Sontheimer EJ. Origins and mechanisms of miRNAs and siRNAs. Cell, 2009, 136: 642-655.
-
(2009)
Cell
, vol.136
, pp. 642-655
-
-
Carthew, R.W.1
Sontheimer, E.J.2
-
2
-
-
60149086351
-
Origin, biogenesis, and activity of plant microRNAs
-
Voinnet O. Origin, biogenesis, and activity of plant microRNAs. Cell, 2009, 136: 669-687.
-
(2009)
Cell
, vol.136
, pp. 669-687
-
-
Voinnet, O.1
-
3
-
-
29144528351
-
Expression of Arabidopsis miRNA genes
-
Xie Z, Allen E, Fahlgren N, Calamar A, Givan SA, Carrington JC. Expression of Arabidopsis miRNA genes. Plant Physiol, 2005, 138: 2145-2154.
-
(2005)
Plant Physiol
, vol.138
, pp. 2145-2154
-
-
Xie, Z.1
Allen, E.2
Fahlgren, N.3
Calamar, A.4
Givan, S.A.5
Carrington, J.C.6
-
5
-
-
34249093687
-
A complex system of small RNAs in the unicellular green alga Chlamydomonas reinhardtii
-
Zhao T, Li G, Mi S, Li S, Hannon GJ, Wang XJ, Qi Y. A complex system of small RNAs in the unicellular green alga Chlamydomonas reinhardtii. Genes Dev, 2007, 21: 1190-1203.
-
(2007)
Genes Dev
, vol.21
, pp. 1190-1203
-
-
Zhao, T.1
Li, G.2
Mi, S.3
Li, S.4
Hannon, G.J.5
Wang, X.J.6
Qi, Y.7
-
6
-
-
34347355440
-
miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii
-
Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC. miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii. Nature, 2007, 447: 1126-1129.
-
(2007)
Nature
, vol.447
, pp. 1126-1129
-
-
Molnar, A.1
Schwach, F.2
Studholme, D.J.3
Thuenemann, E.C.4
Baulcombe, D.C.5
-
7
-
-
15944402847
-
A twelve-step program for evolving multicellularity and a division of labor
-
Kirk DL. A twelve-step program for evolving multicellularity and a division of labor. Bioessays, 2005, 27: 299-310.
-
(2005)
Bioessays
, vol.27
, pp. 299-310
-
-
Kirk, D.L.1
-
8
-
-
77954606278
-
Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri
-
Prochnik SE, Umen J, Nedelcu AM, Hallmann A, Miller SM, Nishii I, Ferris P, Kuo A, Mitros T, Fritz-Laylin LK, Hellsten U, Chapman J, Simakov O, Rensing SA, Terry A, Pangilinan J, Kapitonov V, Jurka J, Salamov A, Shapiro H, Schmutz J, Grimwood J, Lindquist E, Lucas S, Grigoriev IV, Schmitt R, Kirk D, Rokhsar DS. Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri. Science, 2010, 329: 223-226.
-
(2010)
Science
, vol.329
, pp. 223-226
-
-
Prochnik, S.E.1
Umen, J.2
Nedelcu, A.M.3
Hallmann, A.4
Miller, S.M.5
Nishii, I.6
Ferris, P.7
Kuo, A.8
Mitros, T.9
Fritz-Laylin, L.K.10
Hellsten, U.11
Chapman, J.12
Simakov, O.13
Rensing, S.A.14
Terry, A.15
Pangilinan, J.16
Kapitonov, V.17
Jurka, J.18
Salamov, A.19
Shapiro, H.20
Schmutz, J.21
Grimwood, J.22
Lindquist, E.23
Lucas, S.24
Grigoriev, I.V.25
Schmitt, R.26
Kirk, D.27
Rokhsar, D.S.28
more..
-
9
-
-
78649635244
-
Volvox: Simple steps to developmental complexity?
-
Nishii I, Miller SM. Volvox: Simple steps to developmental complexity? Curr Opin Plant Biol, 2010, 13: 646-653.
-
(2010)
Curr Opin Plant Biol
, vol.13
, pp. 646-653
-
-
Nishii, I.1
Miller, S.M.2
-
10
-
-
62549085232
-
Triassic origin and early radiation of multicellular volvocine algae
-
Herron MD, Hackett JD, Aylward FO, Michod RE. Triassic origin and early radiation of multicellular volvocine algae. Proc Natl Acad Sci USA, 2009, 106: 3254-3258.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 3254-3258
-
-
Herron, M.D.1
Hackett, J.D.2
Aylward, F.O.3
Michod, R.E.4
-
12
-
-
33846640625
-
Quantitative analysis of cell-type specific gene expression in the green alga Volvox carteri
-
Nematollahi G, Kianianmomeni A, Hallmann A. Quantitative analysis of cell-type specific gene expression in the green alga Volvox carteri. BMC Genomics, 2006, 7: 321.
-
(2006)
BMC Genomics
, vol.7
, pp. 321
-
-
Nematollahi, G.1
Kianianmomeni, A.2
Hallmann, A.3
-
13
-
-
23844525077
-
Repbase update, a database of eukaryotic repetitive elements
-
Jurka J, Kapitonov VV, Pavlicek A, Klonowski P, Kohany O, Walichiewicz J. Repbase update, a database of eukaryotic repetitive elements. Cytogenet Genome Res, 2005, 110: 462-467.
-
(2005)
Cytogenet Genome Res
, vol.110
, pp. 462-467
-
-
Jurka, J.1
Kapitonov, V.V.2
Pavlicek, A.3
Klonowski, P.4
Kohany, O.5
Walichiewicz, J.6
-
14
-
-
2142738304
-
Weblogo: a sequence logo generator
-
Crooks GE, Hon G, Chandonia JM, Brenner SE. Weblogo: a sequence logo generator. Genome Res, 2004, 14: 1188-1190.
-
(2004)
Genome Res
, vol.14
, pp. 1188-1190
-
-
Crooks, G.E.1
Hon, G.2
Chandonia, J.M.3
Brenner, S.E.4
-
15
-
-
13444252847
-
Rfam: annotating non-coding RNAs in complete genomes
-
Griffiths-Jones S, Moxon S, Marshall M, Khanna A, Eddy SR, Bateman A. Rfam: annotating non-coding RNAs in complete genomes. Nucleic Acids Res, 2005, 33: D121-124.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Griffiths-Jones, S.1
Moxon, S.2
Marshall, M.3
Khanna, A.4
Eddy, S.R.5
Bateman, A.6
-
16
-
-
43449091567
-
Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome
-
Addo-Quaye C, Eshoo TW, Bartel DP, Axtell MJ. Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome. Curr Biol, 2008, 18: 758-762.
-
(2008)
Curr Biol
, vol.18
, pp. 758-762
-
-
Addo-Quaye, C.1
Eshoo, T.W.2
Bartel, D.P.3
Axtell, M.J.4
-
17
-
-
49449118943
-
Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends
-
German MA, Pillay M, Jeong DH, Hetawal A, Luo S, Janardhanan P, Kannan V, Rymarquis LA, Nobuta K, German R, De Paoli E, Lu C, Schroth G, Meyers BC, Green PJ. Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends. Nat Biotechnol, 2008, 26: 941-946.
-
(2008)
Nat Biotechnol
, vol.26
, pp. 941-946
-
-
German, M.A.1
Pillay, M.2
Jeong, D.H.3
Hetawal, A.4
Luo, S.5
Janardhanan, P.6
Kannan, V.7
Rymarquis, L.A.8
Nobuta, K.9
German, R.10
De Paoli, E.11
Lu, C.12
Schroth, G.13
Meyers, B.C.14
Green, P.J.15
-
18
-
-
58049220318
-
Cleaveland: a pipeline for using degradome data to find cleaved small RNA targets
-
Addo-Quaye C, Miller W, Axtell MJ. Cleaveland: a pipeline for using degradome data to find cleaved small RNA targets. Bioinformatics, 2009, 25: 130-131.
-
(2009)
Bioinformatics
, vol.25
, pp. 130-131
-
-
Addo-Quaye, C.1
Miller, W.2
Axtell, M.J.3
-
19
-
-
4444234497
-
In vivo investigation of the transcription, processing, endonucleolytic activity, and functional relevance of the spatial distribution of a plant miRNA
-
Parizotto EA, Dunoyer P, Rahm N, Himber C, Voinnet O. In vivo investigation of the transcription, processing, endonucleolytic activity, and functional relevance of the spatial distribution of a plant miRNA. Genes Dev, 2004, 18: 2237-2242.
-
(2004)
Genes Dev
, vol.18
, pp. 2237-2242
-
-
Parizotto, E.A.1
Dunoyer, P.2
Rahm, N.3
Himber, C.4
Voinnet, O.5
-
20
-
-
33745107518
-
Spatio-temporal accumulation of microRNAs is highly coordinated in developing plant tissues
-
Valoczi A, Varallyay E, Kauppinen S, Burgyan J, Havelda Z. Spatio-temporal accumulation of microRNAs is highly coordinated in developing plant tissues. Plant J, 2006, 47: 140-151.
-
(2006)
Plant J
, vol.47
, pp. 140-151
-
-
Valoczi, A.1
Varallyay, E.2
Kauppinen, S.3
Burgyan, J.4
Havelda, Z.5
-
21
-
-
77953214518
-
microRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana
-
Fahlgren N, Jogdeo S, Kasschau KD, Sullivan CM, Chapman EJ, Laubinger S, Smith LM, Dasenko M, Givan SA, Weigel D, Carrington JC. microRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana. Plant Cell, 2010, 22: 1074-1089.
-
(2010)
Plant Cell
, vol.22
, pp. 1074-1089
-
-
Fahlgren, N.1
Jogdeo, S.2
Kasschau, K.D.3
Sullivan, C.M.4
Chapman, E.J.5
Laubinger, S.6
Smith, L.M.7
Dasenko, M.8
Givan, S.A.9
Weigel, D.10
Carrington, J.C.11
-
22
-
-
22144457368
-
Antiquity of microRNAs and their targets in land plants
-
Axtell MJ, Bartel DP. Antiquity of microRNAs and their targets in land plants. Plant Cell, 2005, 17: 1658-1673.
-
(2005)
Plant Cell
, vol.17
, pp. 1658-1673
-
-
Axtell, M.J.1
Bartel, D.P.2
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