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Volumn 426, Issue 2, 2014, Pages 318-331

Cross-talk between diverse serine integrases

Author keywords

attachment site selection; integrase; phage integration; serine recombinase; site specific recombination

Indexed keywords

HOST FACTOR; INTEGRASE; SERINE INTEGRASE; UNCLASSIFIED DRUG;

EID: 84891829185     PISSN: 00222836     EISSN: 10898638     Source Type: Journal    
DOI: 10.1016/j.jmb.2013.10.013     Document Type: Article
Times cited : (11)

References (37)
  • 1
    • 77953258878 scopus 로고    scopus 로고
    • Site-specific recombination by phiC31 integrase and other large serine recombinases
    • M.C. Smith, W.R. Brown, A.R. McEwan, and P.A. Rowley Site-specific recombination by phiC31 integrase and other large serine recombinases Biochem Soc Trans 38 2010 388 394
    • (2010) Biochem Soc Trans , vol.38 , pp. 388-394
    • Smith, M.C.1    Brown, W.R.2    McEwan, A.R.3    Rowley, P.A.4
  • 2
    • 84873028982 scopus 로고    scopus 로고
    • The site-specific integration reaction of Listeria phage A118 integrase, a serine recombinase
    • S. Mandali, G. Dhar, N.K. Avliyakulov, M.J. Haykinson, and R.C. Johnson The site-specific integration reaction of Listeria phage A118 integrase, a serine recombinase Mobile DNA 4 2013 2
    • (2013) Mobile DNA , vol.4 , pp. 2
    • Mandali, S.1    Dhar, G.2    Avliyakulov, N.K.3    Haykinson, M.J.4    Johnson, R.C.5
  • 3
    • 0344413517 scopus 로고    scopus 로고
    • The orientation of mycobacteriophage Bxb1 integration is solely dependent on the central dinucleotide of attP and attB
    • P. Ghosh, A.I. Kim, and G.F. Hatfull The orientation of mycobacteriophage Bxb1 integration is solely dependent on the central dinucleotide of attP and attB Mol Cell 12 2003 1101 1111
    • (2003) Mol Cell , vol.12 , pp. 1101-1111
    • Ghosh, P.1    Kim, A.I.2    Hatfull, G.F.3
  • 4
    • 84934436744 scopus 로고    scopus 로고
    • Site-specific chromosomal integration mediated by phiC31 integrase
    • A. Keravala, and M.P. Calos Site-specific chromosomal integration mediated by phiC31 integrase Methods Mol Biol 435 2008 165 173
    • (2008) Methods Mol Biol , vol.435 , pp. 165-173
    • Keravala, A.1    Calos, M.P.2
  • 5
    • 34250807697 scopus 로고    scopus 로고
    • Sequences in attB that affect the ability of phiC31 integrase to synapse and to activate DNA cleavage
    • M. Gupta, R. Till, and M.C. Smith Sequences in attB that affect the ability of phiC31 integrase to synapse and to activate DNA cleavage Nucleic Acids Res 35 2007 3407 3419
    • (2007) Nucleic Acids Res , vol.35 , pp. 3407-3419
    • Gupta, M.1    Till, R.2    Smith, M.C.3
  • 6
    • 84878517418 scopus 로고    scopus 로고
    • Attachment site selection and identity in bxb1 serine integrase-mediated site-specific recombination
    • S. Singh, P. Ghosh, and G.F. Hatfull Attachment site selection and identity in bxb1 serine integrase-mediated site-specific recombination PLoS Genet 9 2013 e1003490
    • (2013) PLoS Genet , vol.9 , pp. 1003490
    • Singh, S.1    Ghosh, P.2    Hatfull, G.F.3
  • 7
    • 18844367126 scopus 로고    scopus 로고
    • Synapsis in phage Bxb1 integration: Selection mechanism for the correct pair of recombination sites
    • P. Ghosh, N.R. Pannunzio, and G.F. Hatfull Synapsis in phage Bxb1 integration: selection mechanism for the correct pair of recombination sites J Mol Biol 349 2005 331 348
    • (2005) J Mol Biol , vol.349 , pp. 331-348
    • Ghosh, P.1    Pannunzio, N.R.2    Hatfull, G.F.3
  • 8
    • 0036229438 scopus 로고    scopus 로고
    • Diversity in the serine recombinases
    • M.C. Smith, and H.M. Thorpe Diversity in the serine recombinases Mol Microbiol 44 2002 299 307
    • (2002) Mol Microbiol , vol.44 , pp. 299-307
    • Smith, M.C.1    Thorpe, H.M.2
  • 9
    • 79956326013 scopus 로고    scopus 로고
    • Single-molecule analysis reveals the molecular bearing mechanism of DNA strand exchange by a serine recombinase
    • H. Bai, M. Sun, P. Ghosh, G.F. Hatfull, N.D. Grindley, and J.F. Marko Single-molecule analysis reveals the molecular bearing mechanism of DNA strand exchange by a serine recombinase Proc Natl Acad Sci U S A 108 2011 7419 7424
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 7419-7424
    • Bai, H.1    Sun, M.2    Ghosh, P.3    Hatfull, G.F.4    Grindley, N.D.5    Marko, J.F.6
  • 11
    • 0032510752 scopus 로고    scopus 로고
    • In vitro site-specific integration of bacteriophage DNA catalyzed by a recombinase of the resolvase/invertase family
    • H.M. Thorpe, and M.C. Smith In vitro site-specific integration of bacteriophage DNA catalyzed by a recombinase of the resolvase/invertase family Proc Natl Acad Sci U S A 95 1998 5505 5510
    • (1998) Proc Natl Acad Sci U S A , vol.95 , pp. 5505-5510
    • Thorpe, H.M.1    Smith, M.C.2
  • 12
    • 0142062042 scopus 로고    scopus 로고
    • Mycobacteriophage Bxb1 integrates into the Mycobacterium smegmatis groEL1 gene
    • A.I. Kim, P. Ghosh, M.A. Aaron, L.A. Bibb, S. Jain, and G.F. Hatfull Mycobacteriophage Bxb1 integrates into the Mycobacterium smegmatis groEL1 gene Mol Microbiol 50 2003 463 473
    • (2003) Mol Microbiol , vol.50 , pp. 463-473
    • Kim, A.I.1    Ghosh, P.2    Aaron, M.A.3    Bibb, L.A.4    Jain, S.5    Hatfull, G.F.6
  • 14
    • 1642565399 scopus 로고    scopus 로고
    • Switching the polarity of a bacteriophage integration system
    • M.A. Smith, R. Till, and M.C. Smith Switching the polarity of a bacteriophage integration system Mol Microbiol 51 2004 1719 1728
    • (2004) Mol Microbiol , vol.51 , pp. 1719-1728
    • Smith, M.A.1    Till, R.2    Smith, M.C.3
  • 15
    • 42149195988 scopus 로고    scopus 로고
    • Two-step site selection for serine-integrase-mediated excision: DNA-directed integrase conformation and central dinucleotide proofreading
    • P. Ghosh, L.A. Bibb, and G.F. Hatfull Two-step site selection for serine-integrase-mediated excision: DNA-directed integrase conformation and central dinucleotide proofreading Proc Natl Acad Sci U S A 105 2008 3238 3243
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 3238-3243
    • Ghosh, P.1    Bibb, L.A.2    Hatfull, G.F.3
  • 16
    • 33745192630 scopus 로고    scopus 로고
    • Control of phage Bxb1 excision by a novel recombination directionality factor
    • P. Ghosh, L.R. Wasil, and G.F. Hatfull Control of phage Bxb1 excision by a novel recombination directionality factor PLoS Biol 4 2006 e186
    • (2006) PLoS Biol , vol.4 , pp. 186
    • Ghosh, P.1    Wasil, L.R.2    Hatfull, G.F.3
  • 17
    • 80955178825 scopus 로고    scopus 로고
    • A phage protein that binds phiC31 integrase to switch its directionality
    • T. Khaleel, E. Younger, A.R. McEwan, A.S. Varghese, and M.C. Smith A phage protein that binds phiC31 integrase to switch its directionality Mol Microbiol 80 2011 1450 1463
    • (2011) Mol Microbiol , vol.80 , pp. 1450-1463
    • Khaleel, T.1    Younger, E.2    McEwan, A.R.3    Varghese, A.S.4    Smith, M.C.5
  • 18
    • 69049093934 scopus 로고    scopus 로고
    • DNA binding and synapsis by the large C-terminal domain of phiC31 integrase
    • A.R. McEwan, P.A. Rowley, and M.C. Smith DNA binding and synapsis by the large C-terminal domain of phiC31 integrase Nucleic Acids Res 37 2009 4764 4773
    • (2009) Nucleic Acids Res , vol.37 , pp. 4764-4773
    • McEwan, A.R.1    Rowley, P.A.2    Smith, M.C.3
  • 19
    • 0033745097 scopus 로고    scopus 로고
    • Control of directionality in the site-specific recombination system of the Streptomyces phage phiC31
    • H.M. Thorpe, S.E. Wilson, and M.C. Smith Control of directionality in the site-specific recombination system of the Streptomyces phage phiC31 Mol Microbiol 38 2000 232 241
    • (2000) Mol Microbiol , vol.38 , pp. 232-241
    • Thorpe, H.M.1    Wilson, S.E.2    Smith, M.C.3
  • 20
    • 84884966853 scopus 로고    scopus 로고
    • Attachment site recognition and regulation of directionality by the serine integrases
    • K. Rutherford, P. Yuan, K. Perry, R. Sharp, and G.D. Van Duyne Attachment site recognition and regulation of directionality by the serine integrases Nucleic Acids Res 41 2013 8341 8356
    • (2013) Nucleic Acids Res , vol.41 , pp. 8341-8356
    • Rutherford, K.1    Yuan, P.2    Perry, K.3    Sharp, R.4    Van Duyne, G.D.5
  • 21
    • 84885589628 scopus 로고    scopus 로고
    • Large serine recombinase domain structure and attachment site binding
    • G.D. Van Duyne, and K. Rutherford Large serine recombinase domain structure and attachment site binding Crit Rev Biochem Mol Biol 48 2013 476 491
    • (2013) Crit Rev Biochem Mol Biol , vol.48 , pp. 476-491
    • Van Duyne, G.D.1    Rutherford, K.2
  • 22
    • 33746425864 scopus 로고    scopus 로고
    • Efficient site-specific integration in Plasmodium falciparum chromosomes mediated by mycobacteriophage Bxb1 integrase
    • L.J. Nkrumah, R.A. Muhle, P.A. Moura, P. Ghosh, G.F. Hatfull, and W.R. Jacobs et al. Efficient site-specific integration in Plasmodium falciparum chromosomes mediated by mycobacteriophage Bxb1 integrase Nat Methods 3 2006 615 621
    • (2006) Nat Methods , vol.3 , pp. 615-621
    • Nkrumah, L.J.1    Muhle, R.A.2    Moura, P.A.3    Ghosh, P.4    Hatfull, G.F.5    Jacobs, W.R.6
  • 23
    • 80052647607 scopus 로고    scopus 로고
    • Successive and targeted DNA integrations in the Drosophila genome by Bxb1 and phiC31 integrases
    • J. Huang, P. Ghosh, G.F. Hatfull, and Y. Hong Successive and targeted DNA integrations in the Drosophila genome by Bxb1 and phiC31 integrases Genetics 189 2011 391 395
    • (2011) Genetics , vol.189 , pp. 391-395
    • Huang, J.1    Ghosh, P.2    Hatfull, G.F.3    Hong, Y.4
  • 24
    • 33745410216 scopus 로고    scopus 로고
    • Site-specific transformation of Drosophila via phiC31 integrase-mediated cassette exchange
    • J.R. Bateman, A.M. Lee, and C.T. Wu Site-specific transformation of Drosophila via phiC31 integrase-mediated cassette exchange Genetics 173 2006 769 777
    • (2006) Genetics , vol.173 , pp. 769-777
    • Bateman, J.R.1    Lee, A.M.2    Wu, C.T.3
  • 25
    • 84862822088 scopus 로고    scopus 로고
    • The Bxb1 recombination system demonstrates heritable transmission of site-specific excision in Arabidopsis
    • J.G. Thomson, R. Chan, J. Smith, R. Thilmony, Y.Y. Yau, and Y. Wang et al. The Bxb1 recombination system demonstrates heritable transmission of site-specific excision in Arabidopsis BMC Biotechnol 12 2012 9
    • (2012) BMC Biotechnol , vol.12 , pp. 9
    • Thomson, J.G.1    Chan, R.2    Smith, J.3    Thilmony, R.4    Yau, Y.Y.5    Wang, Y.6
  • 26
    • 84861865655 scopus 로고    scopus 로고
    • Rewritable digital data storage in live cells via engineered control of recombination directionality
    • J. Bonnet, P. Subsoontorn, and D. Endy Rewritable digital data storage in live cells via engineered control of recombination directionality Proc Natl Acad Sci U S A 109 2012 8884 8889
    • (2012) Proc Natl Acad Sci U S A , vol.109 , pp. 8884-8889
    • Bonnet, J.1    Subsoontorn, P.2    Endy, D.3
  • 28
    • 34547886939 scopus 로고    scopus 로고
    • Comparative genomic analysis of mycobacteriophage Tweety: Evolutionary insights and construction of compatible site-specific integration vectors for mycobacteria
    • T.T. Pham, D. Jacobs-Sera, M.L. Pedulla, R.W. Hendrix, and G.F. Hatfull Comparative genomic analysis of mycobacteriophage Tweety: evolutionary insights and construction of compatible site-specific integration vectors for mycobacteria Microbiology 153 2007 2711 2723
    • (2007) Microbiology , vol.153 , pp. 2711-2723
    • Pham, T.T.1    Jacobs-Sera, D.2    Pedulla, M.L.3    Hendrix, R.W.4    Hatfull, G.F.5
  • 29
    • 80051746582 scopus 로고    scopus 로고
    • Zinc is essential for high-affinity DNA binding and recombinase activity of PhiC31 integrase
    • A.R. McEwan, A. Raab, S.M. Kelly, J. Feldmann, and M.C. Smith Zinc is essential for high-affinity DNA binding and recombinase activity of PhiC31 integrase Nucleic Acids Res 39 2011 6137 6147
    • (2011) Nucleic Acids Res , vol.39 , pp. 6137-6147
    • McEwan, A.R.1    Raab, A.2    Kelly, S.M.3    Feldmann, J.4    Smith, M.C.5
  • 30
    • 0036033757 scopus 로고    scopus 로고
    • Integration and excision of the Mycobacterium tuberculosis prophage-like element, phiRv1
    • L.A. Bibb, and G.F. Hatfull Integration and excision of the Mycobacterium tuberculosis prophage-like element, phiRv1 Mol Microbiol 45 2002 1515 1526
    • (2002) Mol Microbiol , vol.45 , pp. 1515-1526
    • Bibb, L.A.1    Hatfull, G.F.2
  • 31
    • 0034858601 scopus 로고    scopus 로고
    • Resolvase-like recombination performed by the TP901-1 integrase
    • A. Breuner, L. Brondsted, and K. Hammer Resolvase-like recombination performed by the TP901-1 integrase Microbiology 147 2001 2051 2063
    • (2001) Microbiology , vol.147 , pp. 2051-2063
    • Breuner, A.1    Brondsted, L.2    Hammer, K.3
  • 32
    • 71349085443 scopus 로고    scopus 로고
    • In vitro characterization of the site-specific recombination system based on actinophage TG1 integrase
    • K. Morita, T. Yamamoto, N. Fusada, M. Komatsu, H. Ikeda, and N. Hirano et al. In vitro characterization of the site-specific recombination system based on actinophage TG1 integrase Mol Genet Genomics 282 2009 607 616
    • (2009) Mol Genet Genomics , vol.282 , pp. 607-616
    • Morita, K.1    Yamamoto, T.2    Fusada, N.3    Komatsu, M.4    Ikeda, H.5    Hirano, N.6
  • 33
    • 52649172218 scopus 로고    scopus 로고
    • Highly efficient in vitro site-specific recombination system based on Streptomyces phage phiBT1 integrase
    • L. Zhang, X. Ou, G. Zhao, and X. Ding Highly efficient in vitro site-specific recombination system based on Streptomyces phage phiBT1 integrase J Bacteriol 190 2008 6392 6397
    • (2008) J Bacteriol , vol.190 , pp. 6392-6397
    • Zhang, L.1    Ou, X.2    Zhao, G.3    Ding, X.4
  • 34
    • 0035945238 scopus 로고    scopus 로고
    • Directed evolution of a recombinase for improved genomic integration at a native human sequence
    • C.R. Sclimenti, B. Thyagarajan, and M.P. Calos Directed evolution of a recombinase for improved genomic integration at a native human sequence Nucleic Acids Res 29 2001 5044 5051
    • (2001) Nucleic Acids Res , vol.29 , pp. 5044-5051
    • Sclimenti, C.R.1    Thyagarajan, B.2    Calos, M.P.3
  • 35
    • 0033105367 scopus 로고    scopus 로고
    • Mutants of Tn3 resolvase which do not require accessory binding sites for recombination activity
    • P.H. Arnold, D.G. Blake, N.D. Grindley, M.R. Boocock, and W.M. Stark Mutants of Tn3 resolvase which do not require accessory binding sites for recombination activity EMBO J 18 1999 1407 1414
    • (1999) EMBO J , vol.18 , pp. 1407-1414
    • Arnold, P.H.1    Blake, D.G.2    Grindley, N.D.3    Boocock, M.R.4    Stark, W.M.5
  • 36
    • 1442276353 scopus 로고    scopus 로고
    • Activating mutations of Tn3 resolvase marking interfaces important in recombination catalysis and its regulation
    • M.E. Burke, P.H. Arnold, J. He, S.V. Wenwieser, S.J. Rowland, and M.R. Boocock et al. Activating mutations of Tn3 resolvase marking interfaces important in recombination catalysis and its regulation Mol Microbiol 51 2004 937 948
    • (2004) Mol Microbiol , vol.51 , pp. 937-948
    • Burke, M.E.1    Arnold, P.H.2    He, J.3    Wenwieser, S.V.4    Rowland, S.J.5    Boocock, M.R.6
  • 37
    • 33947357684 scopus 로고    scopus 로고
    • Recombineering in Mycobacterium tuberculosis
    • J.C. van Kessel, and G.F. Hatfull Recombineering in Mycobacterium tuberculosis Nat Methods 4 2007 147 152
    • (2007) Nat Methods , vol.4 , pp. 147-152
    • Van Kessel, J.C.1    Hatfull, G.F.2


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