-
1
-
-
35748950163
-
Damage-induced ubiquitylation of human RNA polymerase II by the ubiquitin ligase Nedd4, but not Cockayne syndrome proteins or BRCA1
-
Anindya R., Aygün O, Svejstrup JQ. 2007. Damage-induced ubiquitylation of human RNA polymerase II by the ubiquitin ligase Nedd4, but not Cockayne syndrome proteins or BRCA1. Mol Cell 28: 386-397.
-
(2007)
Mol Cell
, vol.28
, pp. 386-397
-
-
Anindya, R.1
Aygün, O.2
Svejstrup, J.Q.3
-
2
-
-
70350783881
-
Tracking rates of transcription and splicing in vivo
-
Ardehali M.B., Lis JT. 2009. Tracking rates of transcription and splicing in vivo. Nat Struct Mol Biol 16: 1123-1124.
-
(2009)
Nat Struct Mol Biol
, vol.16
, pp. 1123-1124
-
-
Ardehali, M.B.1
Lis, J.T.2
-
3
-
-
0022461818
-
A block to elongation is largely responsible for decreased transcription of c-myc in differentiated HL60 cells
-
Bentley D.L., Groudine M. 1986. A block to elongation is largely responsible for decreased transcription of c-myc in differentiated HL60 cells. Nature 321: 702-706.
-
(1986)
Nature
, vol.321
, pp. 702-706
-
-
Bentley, D.L.1
Groudine, M.2
-
4
-
-
84860706859
-
mRNA decapping factors and the exonuclease Xrn2 function in widespread premature termination of RNA polymerase II transcription
-
Brannan K., Kim H, Erickson B, Glover-Cutter K, Kim S, Fong N, Kiemele L., Hansen K, Davis R, Lykke-Andersen J, et al. 2012. mRNA decapping factors and the exonuclease Xrn2 function in widespread premature termination of RNA polymerase II transcription. Mol Cell 46: 311-324.
-
(2012)
Mol Cell
, vol.46
, pp. 311-324
-
-
Brannan, K.1
Kim, H.2
Erickson, B.3
Glover-Cutter, K.4
Kim, S.5
Fong, N.6
Kiemele, L.7
Hansen, K.8
Davis, R.9
Lykke-Andersen, J.10
-
5
-
-
0035943710
-
Flavopiridol inactivates P-TEFb and blocks most RNA polymerase II transcription in vivo
-
Chao S.H., Price DH. 2001. Flavopiridol inactivates P-TEFb and blocks most RNA polymerase II transcription in vivo. J Biol Chem 276: 31793-31799.
-
(2001)
J Biol Chem
, vol.276
, pp. 31793-31799
-
-
Chao, S.H.1
Price, D.H.2
-
6
-
-
57849109058
-
Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters
-
Core L.J., Waterfall JJ, Lis JT. 2008. Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters. Science 322: 1845-1848.
-
(2008)
Science
, vol.322
, pp. 1845-1848
-
-
Core, L.J.1
Waterfall, J.J.2
Lis, J.T.3
-
7
-
-
84868139307
-
Defining the status of RNA polymerase at promoters
-
Core LJ, Waterfall JJ, Gilchrist DA, Fargo DC, Kwak H, Adelman K, Lis JT. 2012. Defining the status of RNA polymerase at promoters. Cell Rep 2: 1025-1035.
-
(2012)
Cell Rep
, vol.2
, pp. 1025-1035
-
-
Core, L.J.1
Waterfall, J.J.2
Gilchrist, D.A.3
Fargo, D.C.4
Kwak, H.5
Adelman, K.6
Lis, J.T.7
-
8
-
-
67650328126
-
Imaging transcription in living cells
-
Darzacq X., Yao J, Larson DR, Causse SZ, Bosanac L, de Turris V, Ruda VM., Lionnet T, Zenklusen D, Guglielmi B, et al. 2009. Imaging transcription in living cells. Annu Rev Biophys 38: 173-196.
-
(2009)
Annu Rev Biophys
, vol.38
, pp. 173-196
-
-
Darzacq, X.1
Yao, J.2
Larson, D.R.3
Causse, S.Z.4
Bosanac, L.5
de Turris, V.6
Ruda, V.M.7
Lionnet, T.8
Zenklusen, D.9
Guglielmi, B.10
-
9
-
-
70249104647
-
Defining mechanisms that regulate RNA polymerase II transcription in vivo
-
Fuda N.J., Ardehali MB, Lis JT. 2009. Defining mechanisms that regulate RNA polymerase II transcription in vivo. Nature 461: 186-192.
-
(2009)
Nature
, vol.461
, pp. 186-192
-
-
Fuda, N.J.1
Ardehali, M.B.2
Lis, J.T.3
-
11
-
-
84888203152
-
Stable pausing by RNA polymerase II provides an opportunity to target and integrate regulatory signals
-
Henriques T., Gilchrist DA, Nechaev S, Bern M, Muse GW, Burkholder A, Fargo DC., Adelman K. 2013. Stable pausing by RNA polymerase II provides an opportunity to target and integrate regulatory signals. Mol Cell 52: 517-528.
-
(2013)
Mol Cell
, vol.52
, pp. 517-528
-
-
Henriques, T.1
Gilchrist, D.A.2
Nechaev, S.3
Bern, M.4
Muse, G.W.5
Burkholder, A.6
Fargo, D.C.7
Adelman, K.8
-
12
-
-
0023513563
-
Anti-termination of transcription within the long terminal repeat of HIV-1 by tat gene product
-
Kao S.Y., Calman AF, Luciw PA, Peterlin BM. 1987. Anti-termination of transcription within the long terminal repeat of HIV-1 by tat gene product. Nature 330: 489-493.
-
(1987)
Nature
, vol.330
, pp. 489-493
-
-
Kao, S.Y.1
Calman, A.F.2
Luciw, P.A.3
Peterlin, B.M.4
-
13
-
-
84874175008
-
Precise maps of RNA polymerase reveal how promoters direct initiation and pausing
-
Kwak H., Fuda NJ, Core LJ, Lis JT. 2013. Precise maps of RNA polymerase reveal how promoters direct initiation and pausing. Science 339: 950-953.
-
(2013)
Science
, vol.339
, pp. 950-953
-
-
Kwak, H.1
Fuda, N.J.2
Core, L.J.3
Lis, J.T.4
-
14
-
-
0025347307
-
Phosphorylation of RNA polymerase IIA occurs subsequent to interaction with the promoter and before the initiation of transcription
-
Laybourn P.J., Dahmus ME. 1990. Phosphorylation of RNA polymerase IIA occurs subsequent to interaction with the promoter and before the initiation of transcription. J Biol Chem 265: 13165-13173.
-
(1990)
J Biol Chem
, vol.265
, pp. 13165-13173
-
-
Laybourn, P.J.1
Dahmus, M.E.2
-
15
-
-
0032459466
-
Promoter-associated pausing in promoter architecture and postinitiation transcriptional regulation
-
Lis JT. 1998. Promoter-associated pausing in promoter architecture and postinitiation transcriptional regulation. Cold Spring Harb Symp Quant Biol 63: 347-356.
-
(1998)
Cold Spring Harb Symp Quant Biol
, vol.63
, pp. 347-356
-
-
Lis, J.T.1
-
16
-
-
36048949269
-
Imaging Drosophila gene activation and polymerase pausing in vivo
-
Lis JT. 2007. Imaging Drosophila gene activation and polymerase pausing in vivo. Nature 450: 198-202.
-
(2007)
Nature
, vol.450
, pp. 198-202
-
-
Lis, J.T.1
-
17
-
-
0034175631
-
P-TEFb kinase recruitment and function at heat shock loci
-
Lis J.T., Mason P, Peng J, Price DH, Werner J. 2000. P-TEFb kinase recruitment and function at heat shock loci. Genes Dev 14: 792-803.
-
(2000)
Genes Dev
, vol.14
, pp. 792-803
-
-
Lis, J.T.1
Mason, P.2
Peng, J.3
Price, D.H.4
Werner, J.5
-
18
-
-
36549061004
-
RNA polymerase is poised for activation across the genome
-
Muse G.W., Gilchrist DA, Nechaev S, Shah R, Parker JS, Grissom SF, Zeitlinger J., Adelman K. 2007. RNA polymerase is poised for activation across the genome. Nat Genet 39: 1507-1511.
-
(2007)
Nat Genet
, vol.39
, pp. 1507-1511
-
-
Muse, G.W.1
Gilchrist, D.A.2
Nechaev, S.3
Shah, R.4
Parker, J.S.5
Grissom, S.F.6
Zeitlinger, J.7
Adelman, K.8
-
19
-
-
38549115170
-
P-TEFb is critical for the maturation of RNA polymerase II into productive elongation in vivo
-
Ni Z., Saunders A, Fuda NJ, Yao J, Suarez J-R, Webb WW, Lis JT. 2008. P-TEFb is critical for the maturation of RNA polymerase II into productive elongation in vivo. Mol Cell Biol 28: 1161-1170.
-
(2008)
Mol Cell Biol
, vol.28
, pp. 1161-1170
-
-
Ni, Z.1
Saunders, A.2
Fuda, N.J.3
Yao, J.4
Suarez, J.-R.5
Webb, W.W.6
Lis, J.T.7
-
20
-
-
0037072602
-
A photoactivatable GFP for selective photolabeling of proteins and cells
-
Patterson G.H., Lippincott-Schwartz J. 2002. A photoactivatable GFP for selective photolabeling of proteins and cells. Science 297: 1873-1877.
-
(2002)
Science
, vol.297
, pp. 1873-1877
-
-
Patterson, G.H.1
Lippincott-Schwartz, J.2
-
21
-
-
77951920690
-
c-Myc regulates transcriptional pause release
-
Rahl P.B., Lin CY, Seila AC, Flynn RA, McCuine S, Burge CB, Sharp PA, Young RA. 2010. c-Myc regulates transcriptional pause release. Cell 141: 432-445.
-
(2010)
Cell
, vol.141
, pp. 432-445
-
-
Rahl, P.B.1
Lin, C.Y.2
Seila, A.C.3
Flynn, R.A.4
McCuine, S.5
Burge, C.B.6
Sharp, P.A.7
Young, R.A.8
-
22
-
-
0027166316
-
In vivo transcriptional pausing and cap formation on three Drosophila heat shock genes
-
Rasmussen E.B., Lis JT. 1993. In vivo transcriptional pausing and cap formation on three Drosophila heat shock genes. Proc Natl Acad Sci 90: 7923-7927.
-
(1993)
Proc Natl Acad Sci
, vol.90
, pp. 7923-7927
-
-
Rasmussen, E.B.1
Lis, J.T.2
-
23
-
-
0024282827
-
The RNA polymerase II molecule at the 59 end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged
-
Rougvie A.E.A., Lis JTJ. 1988. The RNA polymerase II molecule at the 59 end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged. Cell 54: 795-804.
-
(1988)
Cell
, vol.54
, pp. 795-804
-
-
Rougvie, A.E.A.1
Lis, J.T.J.2
-
24
-
-
67651095903
-
Stability, flexibility, and dynamic interactions of colliding RNA polymerase II elongation complexes
-
Saeki H., Svejstrup JQ. 2009. Stability, flexibility, and dynamic interactions of colliding RNA polymerase II elongation complexes. Mol Cell 35: 191-205.
-
(2009)
Mol Cell
, vol.35
, pp. 191-205
-
-
Saeki, H.1
Svejstrup, J.Q.2
-
25
-
-
20444428382
-
Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest
-
Somesh B.P., Reid J, Liu W-F, Søgaard TMM, Erdjument-Bromage H, Tempst P., Svejstrup JQ. 2005. Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest. Cell 121: 913-923.
-
(2005)
Cell
, vol.121
, pp. 913-923
-
-
Somesh, B.P.1
Reid, J.2
Liu, W.-F.3
Søgaard, T.M.M.4
Erdjument-Bromage, H.5
Tempst, P.6
Svejstrup, J.Q.7
-
26
-
-
79951851704
-
XPB, a subunit of TFIIH, is a target of the natural product triptolide
-
Titov D.V., Gilman B, He Q-L, Bhat S, Low W-K, Dang Y, Smeaton M, Demain A.L., Miller PS, Kugel JF, et al. 2011. XPB, a subunit of TFIIH, is a target of the natural product triptolide. Nat Chem Biol 7: 182-188.
-
(2011)
Nat Chem Biol
, vol.7
, pp. 182-188
-
-
Titov, D.V.1
Gilman, B.2
He, Q.-L.3
Bhat, S.4
Low, W.-K.5
Dang, Y.6
Smeaton, M.7
Demain, A.L.8
Miller, P.S.9
Kugel, J.F.10
-
27
-
-
0037609009
-
NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila
-
Wu C-H, Yamaguchi Y, Benjamin LR, Horvat-Gordon M, Washinsky J, Enerly E., Larsson J, Lambertsson A, Handa H, Gilmour D. 2003. NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila. Genes Dev 17: 1402-1414.
-
(2003)
Genes Dev
, vol.17
, pp. 1402-1414
-
-
Wu, C.-H.1
Yamaguchi, Y.2
Benjamin, L.R.3
Horvat-Gordon, M.4
Washinsky, J.5
Enerly, E.6
Larsson, J.7
Lambertsson, A.8
Handa, H.9
Gilmour, D.10
-
28
-
-
0028090567
-
Physical isolation of nascent RNA chains transcribed by RNA polymerase II: Evidence for cotranscriptional splicing
-
Wuarin J., Schibler U. 1994. Physical isolation of nascent RNA chains transcribed by RNA polymerase II: Evidence for cotranscriptional splicing. Mol Cell Biol 14: 7219-7225.
-
(1994)
Mol Cell Biol
, vol.14
, pp. 7219-7225
-
-
Wuarin, J.1
Schibler, U.2
-
29
-
-
37349099448
-
Intranuclear distribution and local dynamics of RNA polymerase II during transcription activation
-
Yao J., Ardehali MB, Fecko CJ, Webb WW, Lis JT. 2007. Intranuclear distribution and local dynamics of RNA polymerase II during transcription activation. Mol Cell 28: 978-990.
-
(2007)
Mol Cell
, vol.28
, pp. 978-990
-
-
Yao, J.1
Ardehali, M.B.2
Fecko, C.J.3
Webb, W.W.4
Lis, J.T.5
-
30
-
-
36549013619
-
RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo
-
Zeitlinger J., Stark A, KellisM, Hong J-W, Nechaev S, Adelman K, LevineM, Young RA. 2007. RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo. Nat Genet 39: 1512-1516.
-
(2007)
Nat Genet
, vol.39
, pp. 1512-1516
-
-
Zeitlinger, J.1
Stark, A.2
Kellis, M.3
Hong, J.-W.4
Nechaev, S.5
Adelman, K.6
Levine, M.7
Young, R.A.8
-
31
-
-
78650250161
-
Recruitment timing and dynamics of transcription factors at the Hsp70 loci in living cells
-
Zobeck K.L., Buckley MS, Zipfel WR, Lis JT. 2010. Recruitment timing and dynamics of transcription factors at the Hsp70 loci in living cells. Mol Cell 40: 965-975.
-
(2010)
Mol Cell
, vol.40
, pp. 965-975
-
-
Zobeck, K.L.1
Buckley, M.S.2
Zipfel, W.R.3
Lis, J.T.4
|