-
1
-
-
33749257470
-
Going through the motions: The ATPase cycle of p97
-
Pye, V. E., Dreveny, I., Briggs, L. C., Sands, C., Beuron, F., Zhang, X., and Freemont, P. S. (2006) Going through the motions: the ATPase cycle of p97. J. Struct. Biol. 156, 12-28
-
(2006)
J. Struct. Biol.
, vol.156
, pp. 12-28
-
-
Pye, V.E.1
Dreveny, I.2
Briggs, L.C.3
Sands, C.4
Beuron, F.5
Zhang, X.6
Freemont, P.S.7
-
2
-
-
14644415865
-
Nucleotide dependent motion and mechanism of action of p97/VCP
-
DeLaBarre, B., and Brunger, A. T. (2005) Nucleotide dependent motion and mechanism of action of p97/VCP. J. Mol. Biol. 347, 437-452
-
(2005)
J. Mol. Biol.
, vol.347
, pp. 437-452
-
-
Delabarre, B.1
Brunger, A.T.2
-
3
-
-
13844253945
-
Conformational changes of p97 during nucleotide hydrolysis determined by smallangle X-Ray scattering
-
Davies, J. M., Tsuruta, H., May, A. P., and Weis, W. I. (2005) Conformational changes of p97 during nucleotide hydrolysis determined by smallangle X-Ray scattering. Structure 13, 183-195
-
(2005)
Structure
, vol.13
, pp. 183-195
-
-
Davies, J.M.1
Tsuruta, H.2
May, A.P.3
Weis, W.I.4
-
4
-
-
84856474838
-
Emerging functions of the VCP/p97 AAA-ATPase in the ubiquitin system
-
Meyer, H., Bug, M., and Bremer, S. (2012) Emerging functions of the VCP/p97 AAA-ATPase in the ubiquitin system. Nat. Cell Biol. 14, 117-123
-
(2012)
Nat. Cell Biol.
, vol.14
, pp. 117-123
-
-
Meyer, H.1
Bug, M.2
Bremer, S.3
-
5
-
-
0036569345
-
From UBA to UBX: New words in the ubiquitin vocabulary
-
Buchberger, A. (2002) From UBA to UBX: new words in the ubiquitin vocabulary. Trends Cell Biol. 12, 216-221
-
(2002)
Trends Cell Biol.
, vol.12
, pp. 216-221
-
-
Buchberger, A.1
-
6
-
-
84855194750
-
Regulation of p97 in the ubiquitin-proteasome system by the UBX protein-family
-
Kloppsteck, P., Ewens, C. A., Förster, A., Zhang, X., and Freemont, P. S. (2012) Regulation of p97 in the ubiquitin-proteasome system by the UBX protein-family. Biochim. Biophys. Acta 1823, 125-129
-
(2012)
Biochim. Biophys. Acta
, vol.1823
, pp. 125-129
-
-
Kloppsteck, P.1
Ewens, C.A.2
Förster, A.3
Zhang, X.4
Freemont, P.S.5
-
7
-
-
0035839113
-
Solution structure and interaction surface of the Cterminal domain from p47: A major p97-cofactor involved in SNARE disassembly
-
Yuan, X., Shaw, A., Zhang, X., Kondo, H., Lally, J., Freemont, P. S., and Matthews, S. (2001) Solution structure and interaction surface of the Cterminal domain from p47: a major p97-cofactor involved in SNARE disassembly. J. Mol. Biol. 311, 255-263
-
(2001)
J. Mol. Biol.
, vol.311
, pp. 255-263
-
-
Yuan, X.1
Shaw, A.2
Zhang, X.3
Kondo, H.4
Lally, J.5
Freemont, P.S.6
Matthews, S.7
-
8
-
-
77953586259
-
The AAA-ATPase Cdc48 and cofactor Shp1 promote chromosome bi-orientation by balancing Aurora B activity
-
Cheng, Y. L., and Chen, R. H. (2010) The AAA-ATPase Cdc48 and cofactor Shp1 promote chromosome bi-orientation by balancing Aurora B activity. J. Cell Sci. 123, 2025-2034
-
(2010)
J. Cell Sci.
, vol.123
, pp. 2025-2034
-
-
Cheng, Y.L.1
Chen, R.H.2
-
9
-
-
67650240053
-
Ubx4 modulates cdc48 activity and influences degradation of misfolded proteins of the endoplasmic reticulum
-
Alberts, S. M., Sonntag, C., Schäfer, A., and Wolf, D. H. (2009) Ubx4 modulates cdc48 activity and influences degradation of misfolded proteins of the endoplasmic reticulum. J. Biol. Chem. 284, 16082-16089
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 16082-16089
-
-
Alberts, S.M.1
Sonntag, C.2
Schäfer, A.3
Wolf, D.H.4
-
10
-
-
2342511583
-
The Ubx2 and Ubx3 cofactors direct Cdc48 activity to proteolytic and nonproteolytic ubiquitin-dependent processes
-
Hartmann-Petersen, R., Wallace, M., Hofmann, K., Koch, G., Johnsen, A. H., Hendil, K. B., and Gordon, C. (2004) The Ubx2 and Ubx3 cofactors direct Cdc48 activity to proteolytic and nonproteolytic ubiquitin-dependent processes. Curr. Biol. 14, 824-828
-
(2004)
Curr. Biol.
, vol.14
, pp. 824-828
-
-
Hartmann-Petersen, R.1
Wallace, M.2
Hofmann, K.3
Koch, G.4
Johnsen, A.H.5
Hendil, K.B.6
Gordon, C.7
-
11
-
-
4444284299
-
Shp1 and Ubx2 are adaptors of Cdc48 involved in ubiquitin-dependent protein degradation
-
Schuberth, C., Richly, H., Rumpf, S., and Buchberger, A. (2004) Shp1 and Ubx2 are adaptors of Cdc48 involved in ubiquitin-dependent protein degradation. EMBO Rep. 5, 818-824
-
(2004)
EMBO Rep.
, vol.5
, pp. 818-824
-
-
Schuberth, C.1
Richly, H.2
Rumpf, S.3
Buchberger, A.4
-
12
-
-
84855188325
-
The Cdc48 machine in endoplasmic reticulum associated protein degradation
-
Wolf, D. H., and Stolz, A. (2012) The Cdc48 machine in endoplasmic reticulum associated protein degradation. Biochim. Biophys. Acta 1823, 117-124
-
(2012)
Biochim. Biophys. Acta
, vol.1823
, pp. 117-124
-
-
Wolf, D.H.1
Stolz, A.2
-
13
-
-
0035818999
-
The AAA ATPase Cdc48/p97 and its partners transport proteins from the ER into the cytosol
-
Ye, Y., Meyer, H. H., and Rapoport, T. A. (2001) The AAA ATPase Cdc48/p97 and its partners transport proteins from the ER into the cytosol. Nature 414, 652-656
-
(2001)
Nature
, vol.414
, pp. 652-656
-
-
Ye, Y.1
Meyer, H.H.2
Rapoport, T.A.3
-
14
-
-
0035658442
-
HRD4/NPL4 is required for the proteasomal processing of ubiquitinated ER proteins
-
Bays, N. W., Wilhovsky, S. K., Goradia, A., Hodgkiss-Harlow, K., and Hampton, R. Y. (2001) HRD4/NPL4 is required for the proteasomal processing of ubiquitinated ER proteins. Mol. Biol. Cell 12, 4114-4128
-
(2001)
Mol. Biol. Cell
, vol.12
, pp. 4114-4128
-
-
Bays, N.W.1
Wilhovsky, S.K.2
Goradia, A.3
Hodgkiss-Harlow, K.4
Hampton, R.Y.5
-
15
-
-
0037084028
-
Role of the ubiquitin-selective CDC48(UFD1/NPL4)chaperone (segregase) in ERAD of OLE1 and other substrates
-
Braun, S., Matuschewski, K., Rape, M., Thoms, S., and Jentsch, S. (2002) Role of the ubiquitin-selective CDC48(UFD1/NPL4)chaperone (segregase) in ERAD of OLE1 and other substrates. EMBO J. 21, 615-621
-
(2002)
EMBO J.
, vol.21
, pp. 615-621
-
-
Braun, S.1
Matuschewski, K.2
Rape, M.3
Thoms, S.4
Jentsch, S.5
-
16
-
-
23144449583
-
Delivery of ubiquitinated substrates to protein-unfolding machines
-
Elsasser, S., and Finley, D. (2005) Delivery of ubiquitinated substrates to protein-unfolding machines. Nat. Cell Biol. 7, 742-749
-
(2005)
Nat. Cell Biol.
, vol.7
, pp. 742-749
-
-
Elsasser, S.1
Finley, D.2
-
17
-
-
0032476655
-
Subcellular distribution of proteasomes implicates a major location of protein degradation in the nuclear envelope-ER network in yeast
-
Enenkel, C., Lehmann, A., and Kloetzel, P. M. (1998) Subcellular distribution of proteasomes implicates a major location of protein degradation in the nuclear envelope-ER network in yeast. EMBO J. 17, 6144-6154
-
(1998)
EMBO J.
, vol.17
, pp. 6144-6154
-
-
Enenkel, C.1
Lehmann, A.2
Kloetzel, P.M.3
-
18
-
-
0036296150
-
20 S proteasomes are imported as precursor complexes into the nucleus of yeast
-
Lehmann, A., Janek, K., Braun, B., Kloetzel, P. M., and Enenkel, C. (2002) 20 S proteasomes are imported as precursor complexes into the nucleus of yeast. J. Mol. Biol. 317, 401-413
-
(2002)
J. Mol. Biol.
, vol.317
, pp. 401-413
-
-
Lehmann, A.1
Janek, K.2
Braun, B.3
Kloetzel, P.M.4
Enenkel, C.5
-
19
-
-
33846842251
-
The assembly pathway of the 19S regulatory particle of the yeast 26S proteasome
-
Isono, E., Nishihara, K., Saeki, Y., Yashiroda, H., Kamata, N., Ge, L., Ueda, T., Kikuchi, Y., Tanaka, K., Nakano, A., and Toh-e, A. (2007) The assembly pathway of the 19S regulatory particle of the yeast 26S proteasome. Mol. Biol. Cell 18, 569-580
-
(2007)
Mol. Biol. Cell
, vol.18
, pp. 569-580
-
-
Isono, E.1
Nishihara, K.2
Saeki, Y.3
Yashiroda, H.4
Kamata, N.5
Ge, L.6
Ueda, T.7
Kikuchi, Y.8
Tanaka, K.9
Nakano, A.10
Toh-e, A.11
-
20
-
-
79955932041
-
Order of the proteasomal ATPases and eukaryotic proteasome assembly
-
Tomko, R. J., Jr., and Hochstrasser, M. (2011) Order of the proteasomal ATPases and eukaryotic proteasome assembly. Cell Biochem. Biophys. 60, 13-20
-
(2011)
Cell Biochem. Biophys.
, vol.60
, pp. 13-20
-
-
Tomko Jr., R.J.1
Hochstrasser, M.2
-
21
-
-
0020120095
-
Coldsensitive cell-division-cycle mutants of yeast: Isolation, properties, and pseudoreversion studies
-
Moir, D., Stewart, S. E., Osmond, B. C., and Botstein, D. (1982) Coldsensitive cell-division-cycle mutants of yeast: isolation, properties, and pseudoreversion studies. Genetics 100, 547-563
-
(1982)
Genetics
, vol.100
, pp. 547-563
-
-
Moir, D.1
Stewart, S.E.2
Osmond, B.C.3
Botstein, D.4
-
22
-
-
33749246525
-
Cdc48 is required for the stability of Cut1/separase in mitotic anaphase
-
Ikai, N., and Yanagida, M. (2006) Cdc48 is required for the stability of Cut1/separase in mitotic anaphase. J. Struct. Biol. 156, 50-61
-
(2006)
J. Struct. Biol.
, vol.156
, pp. 50-61
-
-
Ikai, N.1
Yanagida, M.2
-
23
-
-
79955528965
-
Cdc48/p97-Ufd1-Npl4 antagonizes Aurora B during chromosome segregation in HeLa cells
-
Dobrynin, G., Popp, O., Romer, T., Bremer, S., Schmitz, M. H., Gerlich, D. W., and Meyer, H. (2011) Cdc48/p97-Ufd1-Npl4 antagonizes Aurora B during chromosome segregation in HeLa cells. J. Cell Sci. 124, 1571-1580
-
(2011)
J. Cell Sci.
, vol.124
, pp. 1571-1580
-
-
Dobrynin, G.1
Popp, O.2
Romer, T.3
Bremer, S.4
Schmitz, M.H.5
Gerlich, D.W.6
Meyer, H.7
-
24
-
-
0031820288
-
Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae
-
Longtine, M. S., McKenzie, A., 3rd, Demarini, D. J., Shah, N. G., Wach, A., Brachat, A., Philippsen, P., and Pringle, J. R. (1998) Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae. Yeast 14, 953-961
-
(1998)
Yeast
, vol.14
, pp. 953-961
-
-
Longtine, M.S.1
McKenzie III, A.2
Demarini, D.J.3
Shah, N.G.4
Wach, A.5
Brachat, A.6
Philippsen, P.7
Pringle, J.R.8
-
25
-
-
79957637389
-
Identification of a functional docking site in the Rpn1 LRR domain for the UBA-UBL domain protein Ddi1
-
Gomez, T. A., Kolawa, N., Gee, M., Sweredoski, M. J., and Deshaies, R. J. (2011) Identification of a functional docking site in the Rpn1 LRR domain for the UBA-UBL domain protein Ddi1. BMC Biol. 9, 33
-
(2011)
BMC Biol.
, vol.9
, pp. 33
-
-
Gomez, T.A.1
Kolawa, N.2
Gee, M.3
Sweredoski, M.J.4
Deshaies, R.J.5
-
26
-
-
70350739261
-
An in vitro assay for Cdc20-dependent mitotic anaphase-promoting complex activity from budding yeast
-
Schuyler, S. C., and Murray, A. W. (2009) An in vitro assay for Cdc20-dependent mitotic anaphase-promoting complex activity from budding yeast. Methods Mol. Biol. 545, 271-285
-
(2009)
Methods Mol. Biol.
, vol.545
, pp. 271-285
-
-
Schuyler, S.C.1
Murray, A.W.2
-
27
-
-
18744391955
-
The HEAT repeat protein Blm10 regulates the yeast proteasome by capping the core particle
-
Schmidt, M., Haas, W., Crosas, B., Santamaria, P. G., Gygi, S. P., Walz, T., and Finley, D. (2005) The HEAT repeat protein Blm10 regulates the yeast proteasome by capping the core particle. Nat. Struct. Mol. Biol. 12, 294-303
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, pp. 294-303
-
-
Schmidt, M.1
Haas, W.2
Crosas, B.3
Santamaria, P.G.4
Gygi, S.P.5
Walz, T.6
Finley, D.7
-
28
-
-
23744466996
-
Regulation of nuclear proteasome by Rhp6/Ubc2 through ubiquitination and destruction of the sensor and anchor Cut8
-
Takeda, K., and Yanagida, M. (2005) Regulation of nuclear proteasome by Rhp6/Ubc2 through ubiquitination and destruction of the sensor and anchor Cut8. Cell 122, 393-405
-
(2005)
Cell
, vol.122
, pp. 393-405
-
-
Takeda, K.1
Yanagida, M.2
-
29
-
-
0035853037
-
RPN4 is a ligand, substrate, and transcriptional regulator of the 26S proteasome: A negative feedback circuit
-
Xie, Y., and Varshavsky, A. (2001) RPN4 is a ligand, substrate, and transcriptional regulator of the 26S proteasome: a negative feedback circuit. Proc. Natl. Acad. Sci. U.S.A. 98, 3056-3061
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 3056-3061
-
-
Xie, Y.1
Varshavsky, A.2
-
30
-
-
2942620845
-
Regulatory mechanisms controlling biogenesis of ubiquitin and the proteasome
-
London, M. K., Keck, B. I., Ramos, P. C., and Dohmen, R. J. (2004) Regulatory mechanisms controlling biogenesis of ubiquitin and the proteasome. FEBS Lett. 567, 259-264
-
(2004)
FEBS Lett.
, vol.567
, pp. 259-264
-
-
London, M.K.1
Keck, B.I.2
Ramos, P.C.3
Dohmen, R.J.4
-
31
-
-
1342300578
-
Integral UBL domain proteins: A family of proteasome interacting proteins
-
Hartmann-Petersen, R., and Gordon, C. (2004) Integral UBL domain proteins: a family of proteasome interacting proteins. Semin. Cell Dev. Biol. 15, 247-259
-
(2004)
Semin. Cell Dev. Biol.
, vol.15
, pp. 247-259
-
-
Hartmann-Petersen, R.1
Gordon, C.2
-
32
-
-
1242341446
-
Binding of Cdc48p to a ubiquitin-related UBX domain from novel yeast proteins involved in intracellular proteolysis and sporulation
-
Decottignies, A., Evain, A., and Ghislain, M. (2004) Binding of Cdc48p to a ubiquitin-related UBX domain from novel yeast proteins involved in intracellular proteolysis and sporulation. Yeast 21, 127-139
-
(2004)
Yeast
, vol.21
, pp. 127-139
-
-
Decottignies, A.1
Evain, A.2
Ghislain, M.3
-
33
-
-
0034578389
-
Aggresomes, inclusion bodies and protein aggregation
-
Kopito, R. R. (2000) Aggresomes, inclusion bodies and protein aggregation. Trends Cell Biol. 10, 524-530
-
(2000)
Trends Cell Biol.
, vol.10
, pp. 524-530
-
-
Kopito, R.R.1
-
34
-
-
59649096550
-
Abnormal proteins can form aggresome in yeast: Aggresome-targeting signals and components of the machinery
-
Wang, Y., Meriin, A. B., Zaarur, N., Romanova, N. V., Chernoff, Y. O., Costello, C. E., and Sherman, M. Y. (2009) Abnormal proteins can form aggresome in yeast: aggresome-targeting signals and components of the machinery. FASEB J. 23, 451-463
-
(2009)
FASEB J.
, vol.23
, pp. 451-463
-
-
Wang, Y.1
Meriin, A.B.2
Zaarur, N.3
Romanova, N.V.4
Chernoff, Y.O.5
Costello, C.E.6
Sherman, M.Y.7
-
35
-
-
44649161981
-
Reversible cytoplasmic localization of the proteasome in quiescent yeast cells
-
Laporte, D., Salin, B., Daignan-Fornier, B., and Sagot, I. (2008) Reversible cytoplasmic localization of the proteasome in quiescent yeast cells. J. Cell Biol. 181, 737-745
-
(2008)
J. Cell Biol.
, vol.181
, pp. 737-745
-
-
Laporte, D.1
Salin, B.2
Daignan-Fornier, B.3
Sagot, I.4
-
36
-
-
78951478559
-
Sts1 plays a key role in targeting proteasomes to the nucleus
-
Chen, L., Romero, L., Chuang, S. M., Tournier, V., Joshi, K. K., Lee, J. A., Kovvali, G., and Madura, K. (2011) Sts1 plays a key role in targeting proteasomes to the nucleus. J. Biol. Chem. 286, 3104-3118
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 3104-3118
-
-
Chen, L.1
Romero, L.2
Chuang, S.M.3
Tournier, V.4
Joshi, K.K.5
Lee, J.A.6
Kovvali, G.7
Madura, K.8
-
37
-
-
0028059489
-
DBF8, an essential gene required for efficient chromosome segregation in Saccharomyces cerevisiae
-
Houman, F., and Holm, C. (1994) DBF8, an essential gene required for efficient chromosome segregation in Saccharomyces cerevisiae. Mol. Cell. Biol. 14, 6350-6360
-
(1994)
Mol. Cell. Biol.
, vol.14
, pp. 6350-6360
-
-
Houman, F.1
Holm, C.2
-
38
-
-
0028110813
-
Identification of cut8+ and cek1+, a novel protein kinase gene, which complement a fission yeast mutation that blocks anaphase
-
Samejima, I., and Yanagida, M. (1994) Identification of cut8+ and cek1+, a novel protein kinase gene, which complement a fission yeast mutation that blocks anaphase. Mol. Cell. Biol. 14, 6361-6371
-
(1994)
Mol. Cell. Biol.
, vol.14
, pp. 6361-6371
-
-
Samejima, I.1
Yanagida, M.2
|