Meta-analysis of pre-miRNA polymorphisms association with susceptibility to autoimmune diseases

Immunological Investigations

Volumn 43, Issue 1, 2014, Pages 13-27

  Yang, Yan ^a   Zhang, Kui ^b   Zhou, Rong ^a  

^a SICHUAN UNIVERSITY   (China)

^b SICHUAN UNIVERSITY   (China)

Author keywords

Autoimmune diseases; Meta analysis; Rs2910164; Rs3746444

Indexed keywords

MICRORNA;

ADDISON DISEASE; ALLELE; ANKYLOSING SPONDYLITIS; ANTIPHOSPHOLIPID SYNDROME; ARTICLE; ASIAN; AUTOIMMUNE DISEASE; BEHCET DISEASE; DERMATOMYOSITIS; ETHNICITY; GENETIC MODEL; GENETIC SUSCEPTIBILITY; GENOTYPE; GRAVES DISEASE; HUMAN; INSULIN DEPENDENT DIABETES MELLITUS; JUVENILE RHEUMATOID ARTHRITIS; META ANALYSIS; MYASTHENIA GRAVIS; PHENOTYPE; POLYMYOSITIS; PRIORITY JOURNAL; PSORIASIS; RHEUMATOID ARTHRITIS; SINGLE NUCLEOTIDE POLYMORPHISM; SJOEGREN SYNDROME; SYSTEMIC LUPUS ERYTHEMATOSUS; SYSTEMIC SCLEROSIS; VOGT KOYANAGI SYNDROME;

ALLELES; AUTOIMMUNE DISEASES; GENETIC PREDISPOSITION TO DISEASE; GENOTYPE; HUMANS; MICRORNAS; ODDS RATIO; POLYMORPHISM, GENETIC; POLYMORPHISM, SINGLE NUCLEOTIDE; PUBLICATION BIAS; RNA PRECURSORS;

EID: 84889821827     PISSN: 08820139     EISSN: 15324311     Source Type: Journal    
DOI: 10.3109/08820139.2013.822389     Document Type: Article

References (41)

1. Ambros V. (2003). MicroRNA pathways in flies and worms: Growth, death, fat, stress, and timing. Cell, 113, 673-6
2. Becker KG. (1999). Comparative genetics of type 1 diabetes and autoimmune disease: Common loci, common pathways? Diabetes, 48, 1353-8
3. Becker KG. (2004). The common variants/multiple disease hypothesis of common complex genetic disorders. Med Hypotheses, 62, 309-17
4. Castanotto D, Rossi JJ. (2009). The promises and pitfalls of RNA-interference-based therapeutics. Nature, 457, 426-33
5. Chassin C, Kocur M, Pott J, et al. (2010). miR-146a mediates protective innate immune tolerance in the neonate intestine. Cell Host Microbe, 8, 358-68
6. Chatzikyriakidou A, Voulgari PV, Georgiou I, Drosos AA. (2010). A polymorphism in the 3'-UTR of interleukin-1 receptor-Associated kinase (IRAK1), a target gene of miR-146a, is associated with rheumatoid arthritis susceptibility. Joint Bone Spine, 77, 411-3
7. Curtale G, Citarella F, Carissimi C, et al. (2010). An emerging player in the adaptive immune response: MicroRNA-146a is a modulator of IL-2 expression and activationinduced cell death in T lymphocytes. Blood, 115, 265-73
8. Davis MP, Abreu-Goodger C, van Dongen S, et al. (2012). Large-scale identification of microRNA targets in murine Dgcr8-deficient embryonic stem cell lines. PLoS One, 7, e41762. doi: 10.1371/journal.pone.0041762
9. Duan R, Pak C, Jin P. (2007). Single nucleotide polymorphism associated with mature miR-125a alters the processing of pri-miRNA. Hum Mol Genet, 16, 1124-31
10. Fenoglio C, Cantoni C, De Riz M, et al. (2011). Expression and genetic analysis of miRNAs involved in CD4 cell activation in patients with multiple sclerosis. Neurosci Lett, 504, 9-12
11. Han J, Lee Y, Yeom KH, et al. (2006). Molecular basis for the recognition of primary microRNAs by the Drosha-DGCR8 complex. Cell, 125, 887-901
12. Hashemi M, Eskandari-Nasab E, Zakeri Z, et al. (2012). Association of pre-miRNA-146a rs2910164 and premiRNA-499 rs3746444 polymorphisms and susceptibility to rheumatoid arthritis. Mol Med Rep. doi:10.3892/mmr.2012.1176
13. Hou J, Wang P, Lin L, et al. (2009). MicroRNA-146a feedback inhibits RIG-I-dependent Type I IFN production in macrophages by targeting TRAF6, IRAK1, and IRAK2. J Immunol, 183, 2150-8
14. Jazdzewski K, Liyanarachchi S, Swierniak M, et al. (2009). Polymorphic mature microRNAs from passenger strand of pre-miR-146a contribute to thyroid cancer. Proc Natl Acad Sci USA, 106, 1502-5
15. Jazdzewski K, Murray EL, Franssila K, et al. (2008). Common SNP in pre-miR-146a decreases mature miR expression and predisposes to papillary thyroid carcinoma. Proc Natl Acad Sci USA, 105, 7269-74
16. Jimenez-Morales S, Gamboa-Becerra R, Baca V, et al. (2012). MiR-146a polymorphism is associated with asthma but not with systemic lupus erythematosus and juvenile rheumatoid arthritis in Mexican patients. Tissue Antigens, 80, 317-21
17. Krek A, Grun D, Poy MN, et al. (2005). Combinatorial microRNA target predictions. Nat Genet, 37, 495-500
18. Labbaye C, Spinello I, Quaranta MT, et al. (2008). A three-step pathway comprising PLZF/miR-146a/CXCR4 controls megakaryopoiesis. Nat Cell Biol, 10, 788-801
19. Li Y, Vandenboom 2nd TG,, Wang Z, et al. (2010). miR-146a suppresses invasion of pancreatic cancer cells. Cancer Res, 70, 1486-95
20. Lin SL, Chiang A, Chang D, Ying SY. (2008). Loss of mir-146a function in hormonerefractory prostate cancer. RNA, 14, 417-24
21. Lofgren SE, Frostegard J, Truedsson L, et al. (2012). Genetic association of miRNA-146a with systemic lupus erythematosus in Europeans through decreased expression of the gene. Genes Immun, 13, 268-74
22. Lu LF, Boldin MP, Chaudhry A, et al. (2010). Function of miR-146a in controlling Treg cell-mediated regulation of Th1 responses. Cell, 142, 914-29
23. Luo X, Yang W, Ye DQ, et al. (2011). A functional variant in microRNA-146a promoter modulates its expression and confers disease risk for systemic lupus erythematosus. PLoS Genet, 7, e1002128. doi: 10.1371/journal. pgen.1002128
24. Marrack P, Kappler J, Kotzin BL. (2001). Autoimmune disease: Why and where it occurs. Nat Med, 7, 899-905
25. Park S, Kang S, Min KH, et al. (2013). Age-Associated changes in microRNA expression in bone marrow derived dendritic cells. Immunol Invest, 42, 179-90
26. Pauley KM, Cha S, Chan EK. (2009). MicroRNA in autoimmunity and autoimmune diseases. J Autoimmun, 32, 189-94
27. Pauley KM, Satoh M, Chan AL, et al. (2008). Upregulated miR-146a expression in peripheral blood mononuclear cells from rheumatoid arthritis patients. Arthritis Res Ther, 10, R101. doi: 10.1186/ar2493
28. Qian L, Gao DW, Wang GS, et al. (2012). Relationship between the single nucleotide polymorphisims in pre-miR-146a rs2910164 and expression of miR-146a in rheumatoid arthritis. Chin J Microbiol Immunol, 32, 253-7
29. Rusca N, Monticelli S. (2011). MiR-146a in immunity and disease. Mol Biol Int, 2011, 437301. doi: 10.4061/2011/437301
30. Sakoguchi A, Jinnin M, Makino T, et al. (2013). The miR-146a rs2910164 C/G polymorphism is associated with telangiectasia in systemic sclerosis. Clin Exp Dermatol, 38, 99-100
31. Saunders MA, Liang H, Li WH. (2007). Human polymorphism at microRNAs and microRNA target sites. Proc Natl Acad Sci USA, 104, 3300-5
32. Schmidt CW. (2011). Questions persist: Environmental factors in autoimmune disease. Environ Health Perspect, 119, A249-53
33. Sonkoly E, Wei T, Janson PC, et al. (2007). MicroRNAs: Novel regulators involved in the pathogenesis of psoriasis? PLoS One, 2, e610
34. Suzuki A, Yamada R, Chang X, et al. (2003). Functional haplotypes of PADI4, encoding citrullinating enzyme peptidylarginine deiminase 4, are associated with rheumatoid arthritis. Nat Genet, 34, 395-402
35. Taganov KD, Boldin MP, Chang KJ, Baltimore D. (2006). NF-kappaB-dependent induction of microRNA miR-146, an inhibitor targeted to signaling proteins of innate immune responses. Proc Natl Acad Sci USA, 103, 12481-6
36. Vyse TJ, Todd JA. (1996). Genetic analysis of autoimmune disease. Cell, 85, 311-8
37. Xu B, Feng NH, Li PC, et al. (2010). A functional polymorphism in Pre-miR-146a gene is associated with prostate cancer risk and mature miR-146a expression in vivo. Prostate, 70, 467-72
38. Yang B, Zhang JL, Shi YY, et al. (2011). Association study of single nucleotide polymorphisms in pre-miRNA and rheumatoid arthritis in a Han Chinese population. Mol Biol Rep, 38, 4913-9
39. Zhang H, Pu J, Wang X, et al. (2013). IRAK1 rs3027898 C/A polymorphism is associated with risk of rheumatoid arthritis. Rheumatol Int, 33, 369-75
40. Zhang J, Yang B, Ying B, et al. (2011). Association of pre-microRNAs genetic variants with susceptibility in systemic lupus erythematosus. Mol Biol Rep, 38, 1463-8
41. Zhou Q, Hou S, Liang L, et al. (2012). MicroRNA-146a and Ets-1 gene polymorphisms in ocular Behcet's disease and Vogt-Koyanagi-Harada syndrome. Ann Rheum Dis [Epub ahead of print].